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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00136 phylogeny
for nucleotide alignment


 
(((Q9YQZ6_9HERP/602-1028,((P89285_GVXN/458-940,((DPOL_NPVLD/443-936,(DPOL_NPVBM/428-919,DPOL_NPVOP/425-914)),Q82482_9NUCL/441-938)),(Q9YW56_MSEPV/569-1067,((DPOL_VACCA/497-995,(Q9Q8R2_9POXV/498-996,(Q98207_MCV1/494-994,DPOL_ORFN2/499-998))),DPOL_FOWPV/483-977)))),(DPOL_ASFL6/457-978,((DPOA_TRYBB/684-1157,((DPOA_ORYSA/538-1012,((DPOA_OXYTR/809-1299,DPOA_OXYNO/783-1270),(DPOA_YEAST/792-1248,DPOA_SCHPO/773-1222))),(DPOA_HUMAN/783-1246,DPOA_DROME/805-1258))),(((O74046_CERSY/420-835,(((DPO1_SULSO/450-869,(DPO1_SULOH/448-867,DPO1_SULAC/447-866)),Q59690_PYROC/488-905),DPO1_AERPE/535-951)),((Q59691_PYROC/388-793,DPO2_AERPE/371-774),(DPOL_METVO/393-818,DPOL_ARCFU/361-774))),(DPO2_ECOLI/369-782,((((Q86992_9VIRU/492-1090,(Q9QSK2_IRV6/578-1226,DPOL_RSIV/397-938)),(((DPOZ_YEAST/919-1384,Q9GSR1_DROME/1550-2010),Q9U0U7_LEIMA/2240-2731),((((DPOL_TUHV2/556-1135,DPOL_RHCM6/533-1017),(DPOL_MCMVS/543-1050,DPOL_RCMVM/533-1077)),((Q9WT26_9BETA/517-998,O92827_9BETA/515-999),DPOL_GPCMV/556-1073)),(((DPOL_EHV2/530-1004,((((DPOL_SHV21/522-994,Q9Q6Z6_9GAMA/520-997),O36363_9GAMA/550-1026),O41930_MHV68/528-1001),O40910_HHV8/533-1006)),DPOL_EBV/532-1013),(Q69390_9ALPH/516-1008,((DPOL_HHV21/617-1200,Q9QEL0_9ALPH/621-1171),((DPOL_EHV1B/611-1173,((DPOL_VZVD/597-1136,Q9WSY3_9ALPH/582-1139),O93043_FHV1/606-1159)),Q89604_9ALPH/639-1203))))))),(O36638_9PHYC/422-974,((((((DPOD_YEAST/555-1006,DPOD_CANAL/484-939),DPOD_SCHPO/534-990),(DPOD_PLAFK/544-1000,DPOD_SOYBN/511-969)),DPOD_CAEEL/520-978),DPOD_DROME/534-994),DPOD_MESAU/546-1005))),DPOL_CHVN2/432-881)))))),DPOL_BPR69/386-859,DPOL_BPT4/383-855);
(((Q9YQZ6_9HERP/602-1028:1.03771,((P89285_GVXN/458-940:0.43011,((DPOL_NPVLD/443-936:0.31393,(DPOL_NPVBM/428-919:0.27517,DPOL_NPVOP/425-914:0.18295):0.18460):0.09689,Q82482_9NUCL/441-938:0.29754):0.16529):0.39774,(Q9YW56_MSEPV/569-1067:0.57676,((DPOL_VACCA/497-995:0.16366,(Q9Q8R2_9POXV/498-996:0.12181,(Q98207_MCV1/494-994:0.25054,DPOL_ORFN2/499-998:0.18411):0.27997):0.15271):0.20098,DPOL_FOWPV/483-977:0.24042):0.31804):0.36462):0.05634):0.00929,(DPOL_ASFL6/457-978:0.82437,((DPOA_TRYBB/684-1157:0.43729,((DPOA_ORYSA/538-1012:0.37648,((DPOA_OXYTR/809-1299:0.15881,DPOA_OXYNO/783-1270:0.19786):0.24965,(DPOA_YEAST/792-1248:0.31574,DPOA_SCHPO/773-1222:0.29305):0.15451):0.07212):0.14170,(DPOA_HUMAN/783-1246:0.27092,DPOA_DROME/805-1258:0.34556):0.07536):0.10314):0.20756,(((O74046_CERSY/420-835:0.37837,(((DPO1_SULSO/450-869:0.19596,(DPO1_SULOH/448-867:0.19173,DPO1_SULAC/447-866:0.15555):0.07564):0.23458,Q59690_PYROC/488-905:0.24503):0.08685,DPO1_AERPE/535-951:0.29852):0.11903):0.31038,((Q59691_PYROC/388-793:0.22448,DPO2_AERPE/371-774:0.22367):0.11680,(DPOL_METVO/393-818:0.67755,DPOL_ARCFU/361-774:0.27252):0.12418):0.13390):0.19165,(DPO2_ECOLI/369-782:0.73999,((((Q86992_9VIRU/492-1090:0.51534,(Q9QSK2_IRV6/578-1226:0.90328,DPOL_RSIV/397-938:0.41752):0.17366):0.30058,(((DPOZ_YEAST/919-1384:0.62095,Q9GSR1_DROME/1550-2010:0.25815):0.16076,Q9U0U7_LEIMA/2240-2731:0.41621):0.28386,((((DPOL_TUHV2/556-1135:0.17706,DPOL_RHCM6/533-1017:0.35281):0.06011,(DPOL_MCMVS/543-1050:0.21806,DPOL_RCMVM/533-1077:0.13313):0.10634):0.03585,((Q9WT26_9BETA/517-998:0.18735,O92827_9BETA/515-999:0.31094):0.32338,DPOL_GPCMV/556-1073:0.21822):0.12894):0.11845,(((DPOL_EHV2/530-1004:0.15003,((((DPOL_SHV21/522-994:0.26864,Q9Q6Z6_9GAMA/520-997:0.25340):0.09173,O36363_9GAMA/550-1026:0.19796):0.10378,O41930_MHV68/528-1001:0.30766):0.08348,O40910_HHV8/533-1006:0.24152):0.07983):0.08264,DPOL_EBV/532-1013:0.22029):0.17649,(Q69390_9ALPH/516-1008:0.09421,((DPOL_HHV21/617-1200:0.11489,Q9QEL0_9ALPH/621-1171:0.16660):0.11603,((DPOL_EHV1B/611-1173:0.13944,((DPOL_VZVD/597-1136:0.33220,Q9WSY3_9ALPH/582-1139:0.28300):0.07544,O93043_FHV1/606-1159:0.26070):0.08791):0.14136,Q89604_9ALPH/639-1203:0.15791):0.03022):0.05260):0.19325):0.07478):0.17927):0.05446):0.04738,(O36638_9PHYC/422-974:0.57087,((((((DPOD_YEAST/555-1006:0.26833,DPOD_CANAL/484-939:0.22041):0.05901,DPOD_SCHPO/534-990:0.23874):0.08171,(DPOD_PLAFK/544-1000:0.36162,DPOD_SOYBN/511-969:0.24567):0.08183):0.10850,DPOD_CAEEL/520-978:0.27042):0.13892,DPOD_DROME/534-994:0.20158):0.10840,DPOD_MESAU/546-1005:0.17217):0.24174):0.04996):0.10993,DPOL_CHVN2/432-881:0.57813):0.12776):0.06904):0.10948):0.11477):0.07144):1.31935,DPOL_BPR69/386-859:0.38305,DPOL_BPT4/383-855:0.11381);