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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00135 phylogeny
for restricted amino acid alignment


 
((((((((((Q8T016_DROME/9-548,O94493_SCHPO/1-503),NRT_DROME/330-833),((O44089_CAEEL/4-516,(P92016_CAEEL/1-509,(Q23267_CAEEL/1-531,O01302_CAEEL/1-531))),((Q17541_CAEEL/1-495,(Q17542_CAEEL/3-498,(O45083_CAEEL/8-503,Q9GZG9_CAEEL/1-500))),(Q93254_CAEEL/5-515,O17592_CAEEL/10-532)))),(Q9VPZ5_DROME/21-599,((Q23123_CAEEL/9-560,(EST1_CAEBR/3-534,EST1_CAEEL/3-535)),((O16695_CAEEL/76-614,O16694_CAEEL/1-505),((Q23010_CAEEL/1-539,EST2_CAEEL/1-526),Q9BL43_CAEEL/1-533))))),((((Q9VCL6_DROME/62-632,(Q24197_DROME/1-529,((((Q23733_CULQU/1-530,EST1_CULPI/1-522),(Q9NI58_DROBU/1-532,Q24198_DROME/1-532)),((((Q24201_DROME/1-533,(Q25252_LUCCU/13-551,(Q9U4U9_HAEIR/13-551,Q9XZ70_MUSDO/13-559))),(Q24202_DROME/1-548,Q24203_DROME/1-554)),Q24204_DROME/4-540),(Q9NI59_DROBU/9-555,((Q24194_DROME/1-541,Q9NI61_DROBU/10-554),Q9W243_DROME/10-554)))),Q24200_DROME/12-557))),(O44423_HELVI/4-554,Q9XZN4_CHOFU/1-545)),(((GLT_DROME/34-580,(Q9VLJ1_DROME/58-600,Q9VLJ2_DROME/2-562)),Q9VP25_DROME/18-544),(((ESTE_MYZPE/1-548,Q9GQ01_9HEMI/4-545),((((ESTP_DROME/1-544,EST6_DROMA/1-542),(EST5A_DROPS/5-546,EST5B_DROPS/1-545)),ESTS_DROVI/1-537),(Q9BMT7_DROME/4-555,Q9V7J1_DROME/7-504))),(Q9VLA4_DROME/7-528,(Q9VLA3_DROME/14-578,Q9Y141_DROME/1-540))))),(O53488_MYCTU/3-500,Q9RKZ7_STRCO/1-496))),(((((Q16398_HUMAN/1-542,CEL_BOVIN/1-540),Q92149_SALSA/3-533),Q9W1B3_DROME/10-560),(((Q9U6M8_BOOMI/1-540,(ESTM_MOUSE/1-530,((((EST1_MESAU/8-540,(O35535_RAT/5-533,O70631_RAT/7-540)),O35533_MESAU/10-538),EST2_HUMAN/12-538),((P70104_CAVPO/1-545,(ES22_MOUSE/1-546,EST1_PIG/1-546)),SASB_ANAPL/6-539)))),((Q9NGK5_DROME/157-730,Q9XTG1_CAEEL/1-592),(Q9NK80_DROME/137-695,(NLGN2_RAT/28-601,(NLGN1_RAT/29-626,(NLGNX_HUMAN/25-590,NLGN3_RAT/19-624)))))),(((((O62563_RHIAP/12-528,O61987_9ACAR/12-576),((ACE1_CAEEL/3-561,O96529_9BILA/18-593),(O97110_LOLOP/8-563,Q9BMJ1_SCHGA/80-628))),(((ACES_BUNFA/14-555,((ACES_BRARE/5-583,ACES_ELEEL/6-582),ACES_TORCA/1-545)),(CHLE_HUMAN/6-550,CHLE_MOUSE/7-551)),(O76999_BRAFL/6-549,O76998_BRAFL/2-549))),((ACES_DROME/23-593,Q9NJH6_9HEMI/58-620),((O61587_NIPBR/4-568,O61378_CAEBR/12-574),(O61459_CAEEL/3-564,O61372_CAEEL/1-562)))),(O61864_BOOMI/4-557,Q9U6M9_BOOMI/8-537)))),(((CRYS_DICDI/1-530,D2_DICDI/1-524),((Q9RR71_DEIRA/13-537,Q9RXA0_DEIRA/1-499),Q9WX47_COMAC/11-542)),(THYG_RAT/2186-2719,(THYG_BOVIN/2189-2719,THYG_HUMAN/2181-2718))))),Q20826_CAEEL/61-614),O42728_RHOTO/1-562),(LIP1_CANRU/1-533,LIP2_CANRU/1-532)),Q12616_GEOCN/1-548,LIP1_GEOFE/1-548);
((((((((((Q8T016_DROME/9-548:1.04563,O94493_SCHPO/1-503:1.83282):0.10337,NRT_DROME/330-833:1.10392):0.16094,((O44089_CAEEL/4-516:0.88689,(P92016_CAEEL/1-509:0.36500,(Q23267_CAEEL/1-531:0.29794,O01302_CAEEL/1-531:0.27271):0.12187):0.33636):0.32754,((Q17541_CAEEL/1-495:0.21882,(Q17542_CAEEL/3-498:0.19101,(O45083_CAEEL/8-503:0.34134,Q9GZG9_CAEEL/1-500:0.38074):0.13423):0.04795):0.51986,(Q93254_CAEEL/5-515:0.53465,O17592_CAEEL/10-532:1.14416):0.19980):0.41770):0.21225):0.13330,(Q9VPZ5_DROME/21-599:1.24983,((Q23123_CAEEL/9-560:1.03107,(EST1_CAEBR/3-534:0.13362,EST1_CAEEL/3-535:0.21758):0.63828):0.17117,((O16695_CAEEL/76-614:0.17650,O16694_CAEEL/1-505:0.37809):0.68156,((Q23010_CAEEL/1-539:0.56432,EST2_CAEEL/1-526:0.32317):0.34010,Q9BL43_CAEEL/1-533:0.68367):0.17245):0.23594):0.07169):0.07347):0.07423,((((Q9VCL6_DROME/62-632:0.66102,(Q24197_DROME/1-529:0.68571,((((Q23733_CULQU/1-530:0.37844,EST1_CULPI/1-522:0.45193):0.39407,(Q9NI58_DROBU/1-532:0.67989,Q24198_DROME/1-532:0.37927):0.11414):0.07262,((((Q24201_DROME/1-533:0.30196,(Q25252_LUCCU/13-551:0.08483,(Q9U4U9_HAEIR/13-551:0.20175,Q9XZ70_MUSDO/13-559:0.16294):0.07797):0.23966):0.31038,(Q24202_DROME/1-548:0.44233,Q24203_DROME/1-554:0.42131):0.07272):0.07505,Q24204_DROME/4-540:0.55616):0.06749,(Q9NI59_DROBU/9-555:0.36588,((Q24194_DROME/1-541:0.36239,Q9NI61_DROBU/10-554:0.26114):0.11153,Q9W243_DROME/10-554:0.33613):0.07344):0.20202):0.07267):0.09099,Q24200_DROME/12-557:0.78007):0.08828):0.26974):0.14828,(O44423_HELVI/4-554:0.33100,Q9XZN4_CHOFU/1-545:0.46203):0.62391):0.09075,(((GLT_DROME/34-580:0.87114,(Q9VLJ1_DROME/58-600:0.59905,Q9VLJ2_DROME/2-562:0.77817):0.19692):0.21618,Q9VP25_DROME/18-544:0.98009):0.32506,(((ESTE_MYZPE/1-548:0.67617,Q9GQ01_9HEMI/4-545:0.75562):0.17820,((((ESTP_DROME/1-544:0.28027,EST6_DROMA/1-542:0.21606):0.04628,(EST5A_DROPS/5-546:0.18137,EST5B_DROPS/1-545:0.07371):0.04081):0.19023,ESTS_DROVI/1-537:0.37637):0.59052,(Q9BMT7_DROME/4-555:0.57785,Q9V7J1_DROME/7-504:0.85598):0.31783):0.12967):0.07421,(Q9VLA4_DROME/7-528:0.73885,(Q9VLA3_DROME/14-578:0.45886,Q9Y141_DROME/1-540:0.54428):0.36276):0.20687):0.07694):0.06166):0.14867,(O53488_MYCTU/3-500:0.84120,Q9RKZ7_STRCO/1-496:0.91414):0.39845):0.06495):0.12824,(((((Q16398_HUMAN/1-542:0.17156,CEL_BOVIN/1-540:0.13131):0.22611,Q92149_SALSA/3-533:0.42985):0.42584,Q9W1B3_DROME/10-560:1.07620):0.21989,(((Q9U6M8_BOOMI/1-540:0.85721,(ESTM_MOUSE/1-530:0.56433,((((EST1_MESAU/8-540:0.21413,(O35535_RAT/5-533:0.15432,O70631_RAT/7-540:0.19119):0.05148):0.03968,O35533_MESAU/10-538:0.14157):0.08836,EST2_HUMAN/12-538:0.21641):0.34197,((P70104_CAVPO/1-545:0.17270,(ES22_MOUSE/1-546:0.20361,EST1_PIG/1-546:0.13594):0.08054):0.30942,SASB_ANAPL/6-539:0.33941):0.11257):0.06165):0.30667):0.07421,((Q9NGK5_DROME/157-730:0.76730,Q9XTG1_CAEEL/1-592:0.81865):0.23661,(Q9NK80_DROME/137-695:0.96203,(NLGN2_RAT/28-601:0.17202,(NLGN1_RAT/29-626:0.13227,(NLGNX_HUMAN/25-590:0.11672,NLGN3_RAT/19-624:0.13681):0.04938):0.07512):0.42302):0.11257):0.22249):0.05661,(((((O62563_RHIAP/12-528:0.37618,O61987_9ACAR/12-576:0.08237):0.54633,((ACE1_CAEEL/3-561:0.19013,O96529_9BILA/18-593:0.31893):0.38010,(O97110_LOLOP/8-563:0.52189,Q9BMJ1_SCHGA/80-628:0.45238):0.09142):0.08049):0.10854,(((ACES_BUNFA/14-555:0.26187,((ACES_BRARE/5-583:0.18652,ACES_ELEEL/6-582:0.24652):0.13346,ACES_TORCA/1-545:0.24362):0.04371):0.18171,(CHLE_HUMAN/6-550:0.10131,CHLE_MOUSE/7-551:0.14375):0.26110):0.16297,(O76999_BRAFL/6-549:0.36724,O76998_BRAFL/2-549:0.36275):0.16776):0.14129):0.04204,((ACES_DROME/23-593:0.36281,Q9NJH6_9HEMI/58-620:0.30282):0.40099,((O61587_NIPBR/4-568:0.65860,O61378_CAEBR/12-574:0.49987):0.31854,(O61459_CAEEL/3-564:0.51551,O61372_CAEEL/1-562:0.49250):0.26892):0.15123):0.06533):0.21441,(O61864_BOOMI/4-557:0.87383,Q9U6M9_BOOMI/8-537:0.83838):0.21877):0.13947):0.04720):0.06185,(((CRYS_DICDI/1-530:0.32885,D2_DICDI/1-524:0.38296):0.59890,((Q9RR71_DEIRA/13-537:0.56298,Q9RXA0_DEIRA/1-499:0.72405):0.14106,Q9WX47_COMAC/11-542:0.85182):0.23218):0.13430,(THYG_RAT/2186-2719:0.20024,(THYG_BOVIN/2189-2719:0.18429,THYG_HUMAN/2181-2718:0.14410):0.07793):0.83482):0.12049):0.05192):0.16700,Q20826_CAEEL/61-614:1.20279):0.24699,O42728_RHOTO/1-562:1.02376):0.48042,(LIP1_CANRU/1-533:0.11353,LIP2_CANRU/1-532:0.15170):0.42671):0.41497,Q12616_GEOCN/1-548:0.14942,LIP1_GEOFE/1-548:0.08949);