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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF00124 - Photo_RC)
Photosynthetic reaction centre protein
(
Pfam
reference: accession no.
PF00124
)
(
Interpro
reference: accession no.
IPR000484
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 310 aa
(ave. pairwise identity: 0.37)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.95)
nucleotides
(available for above)
12 sequences @ 930 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 4.55)
amino acids, restricted set
(corresp. to available nt seqs)
12 sequences @ 310 aa
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 6.65)