EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00120 - Gln-synt_C)
Glutamine synthetase, catalytic domain
(Pfam reference: accession no. PF00120)
(Interpro reference: accession no. IPR008146)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
106 sequences @ 340 aa
(ave. pairwise identity: 0.33)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 43.61)
nucleotides
(available for above)
103 sequences @ 1020 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 34.97)
amino acids, restricted set
(corresp. to available nt seqs)
103 sequences @ 340 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 42.44)