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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00105 phylogeny
for amino acid alignment


 
((((((((ERBA_AVIER/35-112,NHR10_CAEEL/16-91),((ECR_DROME/262-337,VDR_HUMAN/22-97),(EGON_DROME/3-79,KNIR_DROME/3-79))),(((PPAR_HUMAN/100-174,((CNR14_CAEEL/149-224,E78A_DROME/365-440),(E75A_DROME/243-319,NR1D1_HUMAN/130-206))),(NHR23_CAEEL/161-236,RORA_HUMAN/104-179)),RRA_HUMAN/86-161)),((((TLL_DROME/32-109,HNF4A_HUMAN/49-124),(EAR2_HUMAN/54-129,7UP1_DROME/198-273)),TR2_HUMAN/111-186),RXRG_CHICK/141-216)),(NHR6_CAEEL/266-341,NR4A1_HUMAN/265-340)),STF1_BOVIN/11-86),(ERR1_HUMAN/174-249,ESR1_CHICK/177-252)),ANDR_HUMAN/557-632,GCR_HUMAN/419-494);
((((((((ERBA_AVIER/35-112:0.33845,NHR10_CAEEL/16-91:0.60186):0.14159,((ECR_DROME/262-337:0.40182,VDR_HUMAN/22-97:0.43866):0.10935,(EGON_DROME/3-79:0.06768,KNIR_DROME/3-79:0.22264):0.56595):0.07940):0.07627,(((PPAR_HUMAN/100-174:0.33246,((CNR14_CAEEL/149-224:0.26508,E78A_DROME/365-440:0.08605):0.10859,(E75A_DROME/243-319:0.12797,NR1D1_HUMAN/130-206:0.09076):0.09213):0.09643):0.13359,(NHR23_CAEEL/161-236:0.15413,RORA_HUMAN/104-179:0.08480):0.14666):0.14031,RRA_HUMAN/86-161:0.20637):0.09882):0.03527,((((TLL_DROME/32-109:0.35619,HNF4A_HUMAN/49-124:0.26251):0.11092,(EAR2_HUMAN/54-129:0.00000,7UP1_DROME/198-273:0.19642):0.16743):0.11011,TR2_HUMAN/111-186:0.24582):0.01315,RXRG_CHICK/141-216:0.25220):0.14729):0.10515,(NHR6_CAEEL/266-341:0.24947,NR4A1_HUMAN/265-340:0.12133):0.14945):0.07296,STF1_BOVIN/11-86:0.29163):0.17006,(ERR1_HUMAN/174-249:0.22380,ESR1_CHICK/177-252:0.27502):0.13137):0.41089,ANDR_HUMAN/557-632:0.20989,GCR_HUMAN/419-494:0.08165);