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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00098 - zf-CCHC)
Zinc knuckle
(Pfam reference: accession no. PF00098)
(Interpro reference: accession no. IPR001878)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
208 sequences @ 18 aa
(ave. pairwise identity: 0.45)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 80.80)
nucleotides
(available for above)
192 sequences @ 54 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 58.68)
amino acids, restricted set
(corresp. to available nt seqs)
192 sequences @ 18 aa
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 78.19)