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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00097 phylogeny
for restricted amino acid alignment


 
(((((((((((((((Q9FWY0_ARATH/20-65,(O64633_ARATH/74-119,((Q9FYM9_ARATH/249-296,Q9SQT6_ARATH/218-264),Q9FIL2_ARATH/81-129))),Q9W3Y8_DROME/91-137),(((Q18997_CAEEL/25-71,Q93227_CAEEL/13-67),(MARH2_MOUSE/64-109,Q9P2E8_HUMAN/205-250)),((((Q9NIN1_9APIC/232-291,Q9DBD2_MOUSE/76-122),((O49494_ARATH/68-114,SSM4_YEAST/39-93),O60103_SCHPO/8-54)),(Q9V972_DROME/167-212,Q9XWI0_CAEEL/194-247)),Q9H992_HUMAN/552-607))),(O40920_HHV8/9-53,(((Q997C2_9POXV/23-68,VIE1_BHV4D/132-176),O41933_MHV68/8-51),Q20977_CAEEL/52-95))),Q20802_CAEEL/160-209),((Q9VQI2_DROME/392-442,Q39623_CHLRE/12-58),(Q21530_CAEEL/16-66,((Q9VB61_DROME/23-78,Q9W3I6_DROME/34-88),Q9CPS3_MOUSE/14-68)))),(ZEF2_IRV6/85-132,CBL_HUMAN/381-419)),(((YKZ7_YEAST/179-223,RAD8_SCHPO/877-922),RAD5_YEAST/914-960),(((((RO52_HUMAN/16-54,TRI30_MOUSE/15-58),(A33_PLEWA/162-201,TRI27_HUMAN/16-56)),((((SUZ2_DROME/35-73,PSC_DROME/265-303),BMI1_HUMAN/18-56),YNN1_CAEEL/8-45),(RAD18_YEAST/28-65,(BRCA1_HUMAN/24-64,(TRAF2_MOUSE/34-72,RNG1_HUMAN/19-58))))),(RAG1_CHICK/289-327,RAD16_YEAST/537-580)),(RFP1_CAEEL/782-820,YEU6_YEAST/206-249)))),PEX2_CRIGR/243-282),(PML_HUMAN/57-91,NHL1_CAEEL/43-83)),GOLI_DROME/303-343),(((ICP0_HHV11/116-156,ICP0_PRVIF/46-84),ICP0_BHV1J/13-51),ICP0_VZVD/19-57)),VCG3_NPVAC/8-62),VIE2_NPVOP/207-254),PE38_NPVAC/86-138,PE38_NPVOP/39-91);
(((((((((((((((Q9FWY0_ARATH/20-65:0.32895,(O64633_ARATH/74-119:0.60294,((Q9FYM9_ARATH/249-296:0.29010,Q9SQT6_ARATH/218-264:0.32425):0.29526,Q9FIL2_ARATH/81-129:0.30603):0.16772):0.31482):0.27256,Q9W3Y8_DROME/91-137:0.90393):0.08705,(((Q18997_CAEEL/25-71:0.49380,Q93227_CAEEL/13-67:0.33507):0.16161,(MARH2_MOUSE/64-109:0.17181,Q9P2E8_HUMAN/205-250:0.79848):0.18702):0.18647,((((Q9NIN1_9APIC/232-291:0.58953,Q9DBD2_MOUSE/76-122:0.12559):0.27004,((O49494_ARATH/68-114:0.35474,SSM4_YEAST/39-93:0.53289):0.13037,O60103_SCHPO/8-54:0.14583):0.28862):0.07159,(Q9V972_DROME/167-212:0.38489,Q9XWI0_CAEEL/194-247:0.38413):0.08353):0.08974,Q9H992_HUMAN/552-607:0.31142):0.10634):0.11627):0.10980,(O40920_HHV8/9-53:0.59892,(((Q997C2_9POXV/23-68:0.63196,VIE1_BHV4D/132-176:0.55886):0.24470,O41933_MHV68/8-51:0.58927):0.10715,Q20977_CAEEL/52-95:0.56540):0.06553):0.03877):0.14141,Q20802_CAEEL/160-209:1.31883):0.00000,((Q9VQI2_DROME/392-442:0.36198,Q39623_CHLRE/12-58:0.69071):0.15490,(Q21530_CAEEL/16-66:0.69004,((Q9VB61_DROME/23-78:0.34667,Q9W3I6_DROME/34-88:0.30213):0.16452,Q9CPS3_MOUSE/14-68:0.12167):0.24773):0.43356):0.26215):0.58013,(ZEF2_IRV6/85-132:0.93565,CBL_HUMAN/381-419:0.42930):0.39376):0.15475,(((YKZ7_YEAST/179-223:1.15279,RAD8_SCHPO/877-922:0.81920):0.21294,RAD5_YEAST/914-960:0.55904):0.35620,(((((RO52_HUMAN/16-54:0.46106,TRI30_MOUSE/15-58:0.34427):0.07424,(A33_PLEWA/162-201:0.27886,TRI27_HUMAN/16-56:0.69492):0.25728):0.10679,((((SUZ2_DROME/35-73:0.60188,PSC_DROME/265-303:0.28799):0.17765,BMI1_HUMAN/18-56:0.26277):0.69179,YNN1_CAEEL/8-45:0.07598):0.36433,(RAD18_YEAST/28-65:0.35953,(BRCA1_HUMAN/24-64:0.46283,(TRAF2_MOUSE/34-72:0.76941,RNG1_HUMAN/19-58:0.56603):0.21354):0.09741):0.16305):0.26038):0.20319,(RAG1_CHICK/289-327:1.15327,RAD16_YEAST/537-580:0.19639):0.48901):0.13593,(RFP1_CAEEL/782-820:0.77365,YEU6_YEAST/206-249:0.81897):0.24915):0.05764):0.20731):0.17691,PEX2_CRIGR/243-282:1.35071):0.08221,(PML_HUMAN/57-91:0.85880,NHL1_CAEEL/43-83:0.09713):0.24831):0.40580,GOLI_DROME/303-343:0.73609):0.25084,(((ICP0_HHV11/116-156:0.64494,ICP0_PRVIF/46-84:0.30317):0.12841,ICP0_BHV1J/13-51:0.47321):0.16636,ICP0_VZVD/19-57:0.52726):0.25467):0.28922,VCG3_NPVAC/8-62:1.01738):0.33084,VIE2_NPVOP/207-254:1.06421):0.15178,PE38_NPVAC/86-138:0.27241,PE38_NPVOP/39-91:0.30605);