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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00080 - Sod_Cu)
Copper/zinc superoxide dismutase (SODC)
(Pfam reference: accession no. PF00080)
(Interpro reference: accession no. IPR001424)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
28 sequences @ 203 aa
(ave. pairwise identity: 0.49)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 10.89)
nucleotides
(available for above)
23 sequences @ 609 bp
(ave. pairwise identity: 0.51)
New Hampshire format
(total tree length: 8.53)
amino acids, restricted set
(corresp. to available nt seqs)
23 sequences @ 203 aa
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 9.69)