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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00078 - RVT_1)
Reverse transcriptase (RNA-dependent DNA polymerase)
(Pfam reference: accession no. PF00078)
(Interpro reference: accession no. IPR000477)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
164 sequences @ 397 aa
(ave. pairwise identity: 0.21)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 98.41)
nucleotides
(available for above)
145 sequences @ 1191 bp
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 71.74)
amino acids, restricted set
(corresp. to available nt seqs)
145 sequences @ 397 aa
(ave. pairwise identity: 0.21)
New Hampshire format
(total tree length: 92.32)