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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00061 phylogeny
for nucleotide alignment


 
(((((((((((((((((Q8QHA8_9AVES/6-132,(TLBP_MOUSE/6-132,(Q9DAK4_MOUSE/6-132,MYP2_HUMAN/5-131))),FABPE_BOVIN/8-134),FABPA_RAT/5-131),O57663_9PERC/6-133),(((FABPH_ONCMY/5-131,(O57667_CHAAC/6-132,Q90W92_FUNHE/6-132)),(Q9I896_ANGJA/8-134,(FABP1_ECHGR/5-132,FABP2_ECHGR/5-132))),FABPH_PIG/5-131)),FABPB_HUMAN/5-131),(FABP9_CAEEL/23-151,FABP7_CAEEL/8-137)),(FABP_BLOTA/4-130,((FABP_SCHJA/5-132,(FABP3_FASHE/5-132,FABP1_FASGI/4-131)),FABP_CLOSI/5-133))),((((FABPI_HUMAN/3-131,FABPI_MOUSE/3-131),(FABPI_XENLA/3-131,Q8AX65_BRARE/4-132)),((RET2_HUMAN/5-133,Q8UVG6_BRARE/6-134),(RET5_HUMAN/5-133,RET7_HUMAN/6-134))),(RET3_FUGRU/4-136,RET3_XENLA/4-137))),(((O61236_MANSE/4-132,Q8IGA2_DROME/16-142),FABPM_LOCMI/5-133),Q8WR15_METEN/5-135)),(FABP1_MANSE/4-132,FABP2_MANSE/3-131)),((((ILBP_RABIT/3-126,ILBP_RAT/3-126),((FABP_FUGRU/4-125,Q8JJ04_EPICO/4-127),(FABPL_MOUSE/4-127,Q90WA9_CHICK/4-127))),(FABPL_ANOPU/3-125,FABPL_CHICK/3-125)),Q9U6H2_MYXGL/6-128)),OLFA_RANPI/32-172),(((((((PAEP_HUMAN/34-175,O77511_PAPCY/34-181),(O97877_FELCA/9-150,(LACB_BOVIN/32-173,LACB_PIG/34-173))),LACB_TRIVU/34-169),((Q28388_HORSE/34-173,(TRIC_TRIVU/39-178,ALL2_CANFA/34-173)),(MUPL_MOUSE/34-174,(((MUP_RAT/35-174,(MUP3_MOUSE/38-177,(MUP2_MOUSE/34-173,MUP4_MOUSE/32-171))),(SAL_PIG/35-174,ALL1_HORSE/34-174)),(((OBP_RAT/29-168,Q9D3N5_MOUSE/29-169),Q99MG7_MESAU/29-168),(((PBAS_MOUSE/27-166,PBAS_RAT/29-168),(Q8HZN2_ELEMA/15-155,ALL2_BOVIN/29-168)),(APHR_CRICR/23-163,P97336_MOUSE/3-143))))))),((((Q8T5Q9_HYPCU/38-182,LAZA_SCHAM/43-188),(((APOD_HUMAN/43-184,APOD_CAVPO/43-184),APOD_RAT/43-184),Q8SXR1_DROME/48-190)),(((Q8T119_SAMCR/37-183,Q8T118_SAMCR/39-185),(Q95P97_BOMMO/38-184,(Q24996_GALME/38-184,BBP_PIEBR/38-182))),Q00629_MANSE/41-189)),((RETB_XENLA/41-191,Q9I901_SPAAU/39-189),PURP_CHICK/41-193))),(((((ALL1_CANFA/32-167,VEGP_PIG/33-169),VEGP_HUMAN/32-169),VEGP1_RAT/31-170),((LLPA_MACEU/30-169,LLP_TRIVU/30-169),LLPB_MACEU/29-167)),(((Q63613_RAT/31-169,Q8K1H9_MOUSE/31-170),VNS2_MOUSE/33-170),OBP2B_HUMAN/26-164))),((((Q8QGV4_BRARE/34-178,((O88787_MOUSE/13-153,Q924P3_MOUSE/33-163),(O93588_LACVV/29-161,O93589_LACVV/25-158))),((((((O70160_CAVPO/41-186,AMBP_MOUSE/40-185),AMBP_HUMAN/41-186),AMBP_BOVIN/41-186),(AMBP_PLEPL/43-187,Q91484_SALSA/40-185)),P70004_XENLA/40-184),CO8G_HUMAN/48-186)),((((((PGHD_FELCA/40-184,(PGHD_BOVIN/40-184,PGHD_PIG/38-182)),Q9N2C2_RABIT/40-184),PGHD_HUMAN/40-184),PGHD_MOUSE/40-184),((NGAL_MOUSE/48-195,NGAL_HUMAN/48-193),Q9D265_MOUSE/4-149)),((LIPO_BUFMA/34-177,Q91721_XENLA/35-178),Q8QFM7_CHICK/35-178))),(EXFAB_CHICK/31-171,Q8UWH4_CHICK/47-188)))),((A1AG2_HUMAN/40-180,Q29014_PIG/20-160),A1AG_RABIT/40-180)),A1AG_RAT/41-180),A1AG1_MUSCR/41-181,A1AG3_MOUSE/40-180);
(((((((((((((((((Q8QHA8_9AVES/6-132:0.14300,(TLBP_MOUSE/6-132:0.30369,(Q9DAK4_MOUSE/6-132:0.26225,MYP2_HUMAN/5-131:0.18387):0.03620):0.03082):0.03465,FABPE_BOVIN/8-134:0.39362):0.04145,FABPA_RAT/5-131:0.17451):0.11993,O57663_9PERC/6-133:0.29883):0.09193,(((FABPH_ONCMY/5-131:0.14168,(O57667_CHAAC/6-132:0.10745,Q90W92_FUNHE/6-132:0.11208):0.05287):0.03944,(Q9I896_ANGJA/8-134:0.14141,(FABP1_ECHGR/5-132:0.05089,FABP2_ECHGR/5-132:0.13742):0.44067):0.08399):0.09707,FABPH_PIG/5-131:0.18192):0.02090):0.03484,FABPB_HUMAN/5-131:0.22732):0.10220,(FABP9_CAEEL/23-151:0.40130,FABP7_CAEEL/8-137:0.44868):0.09506):0.07908,(FABP_BLOTA/4-130:0.35748,((FABP_SCHJA/5-132:0.23247,(FABP3_FASHE/5-132:0.06594,FABP1_FASGI/4-131:0.25317):0.27635):0.11028,FABP_CLOSI/5-133:0.26403):0.17482):0.13111):0.05313,((((FABPI_HUMAN/3-131:0.06967,FABPI_MOUSE/3-131:0.14500):0.10485,(FABPI_XENLA/3-131:0.19218,Q8AX65_BRARE/4-132:0.23943):0.03590):0.47918,((RET2_HUMAN/5-133:0.16350,Q8UVG6_BRARE/6-134:0.14761):0.09961,(RET5_HUMAN/5-133:0.37419,RET7_HUMAN/6-134:0.26725):0.04124):0.26703):0.02956,(RET3_FUGRU/4-136:0.20331,RET3_XENLA/4-137:0.20378):0.18851):0.09623):0.04657,(((O61236_MANSE/4-132:0.33368,Q8IGA2_DROME/16-142:0.15941):0.04660,FABPM_LOCMI/5-133:0.30095):0.07879,Q8WR15_METEN/5-135:0.23869):0.07079):0.09479,(FABP1_MANSE/4-132:0.31744,FABP2_MANSE/3-131:0.24131):0.37777):0.06560,((((ILBP_RABIT/3-126:0.12130,ILBP_RAT/3-126:0.10347):0.28777,((FABP_FUGRU/4-125:0.14601,Q8JJ04_EPICO/4-127:0.10366):0.12939,(FABPL_MOUSE/4-127:0.19330,Q90WA9_CHICK/4-127:0.17022):0.03857):0.19558):0.04728,(FABPL_ANOPU/3-125:0.11477,FABPL_CHICK/3-125:0.25383):0.30762):0.06377,Q9U6H2_MYXGL/6-128:0.47694):0.05897):0.60194,OLFA_RANPI/32-172:0.85341):0.01445,(((((((PAEP_HUMAN/34-175:0.21957,O77511_PAPCY/34-181:0.12693):0.06551,(O97877_FELCA/9-150:0.12624,(LACB_BOVIN/32-173:0.10680,LACB_PIG/34-173:0.12379):0.06840):0.03216):0.08285,LACB_TRIVU/34-169:0.51331):0.27961,((Q28388_HORSE/34-173:0.37411,(TRIC_TRIVU/39-178:0.41290,ALL2_CANFA/34-173:0.45144):0.11399):0.08712,(MUPL_MOUSE/34-174:0.39377,(((MUP_RAT/35-174:0.12492,(MUP3_MOUSE/38-177:0.10561,(MUP2_MOUSE/34-173:0.08393,MUP4_MOUSE/32-171:0.03041):0.02294):0.04237):0.11872,(SAL_PIG/35-174:0.14364,ALL1_HORSE/34-174:0.15682):0.08802):0.14989,(((OBP_RAT/29-168:0.10075,Q9D3N5_MOUSE/29-169:0.12034):0.08978,Q99MG7_MESAU/29-168:0.12810):0.15302,(((PBAS_MOUSE/27-166:0.07930,PBAS_RAT/29-168:0.07356):0.41154,(Q8HZN2_ELEMA/15-155:0.44956,ALL2_BOVIN/29-168:0.34227):0.05463):0.08893,(APHR_CRICR/23-163:0.19848,P97336_MOUSE/3-143:0.24728):0.25207):0.08967):0.44122):0.12424):0.07958):0.15177):0.08070,((((Q8T5Q9_HYPCU/38-182:0.67081,LAZA_SCHAM/43-188:0.49545):0.14301,(((APOD_HUMAN/43-184:0.12628,APOD_CAVPO/43-184:0.09927):0.06504,APOD_RAT/43-184:0.07216):0.32874,Q8SXR1_DROME/48-190:0.53502):0.11773):0.06907,(((Q8T119_SAMCR/37-183:0.42674,Q8T118_SAMCR/39-185:0.30388):0.05566,(Q95P97_BOMMO/38-184:0.19802,(Q24996_GALME/38-184:0.22904,BBP_PIEBR/38-182:0.37595):0.05659):0.11504):0.12037,Q00629_MANSE/41-189:0.27286):0.29398):0.15466,((RETB_XENLA/41-191:0.32484,Q9I901_SPAAU/39-189:0.26886):0.20456,PURP_CHICK/41-193:0.14133):0.48793):0.38062):0.03733,(((((ALL1_CANFA/32-167:0.17573,VEGP_PIG/33-169:0.15941):0.06917,VEGP_HUMAN/32-169:0.13529):0.02437,VEGP1_RAT/31-170:0.23024):0.11644,((LLPA_MACEU/30-169:0.09091,LLP_TRIVU/30-169:0.10028):0.18322,LLPB_MACEU/29-167:0.15994):0.31734):0.04319,(((Q63613_RAT/31-169:0.20363,Q8K1H9_MOUSE/31-170:0.27225):0.04078,VNS2_MOUSE/33-170:0.43081):0.07897,OBP2B_HUMAN/26-164:0.20372):0.09783):0.30540):0.11369,((((Q8QGV4_BRARE/34-178:0.36384,((O88787_MOUSE/13-153:0.48160,Q924P3_MOUSE/33-163:0.72559):0.18438,(O93588_LACVV/29-161:0.01307,O93589_LACVV/25-158:0.18087):0.48672):0.18680):0.05233,((((((O70160_CAVPO/41-186:0.12445,AMBP_MOUSE/40-185:0.14714):0.02834,AMBP_HUMAN/41-186:0.05833):0.05236,AMBP_BOVIN/41-186:0.10545):0.20115,(AMBP_PLEPL/43-187:0.27481,Q91484_SALSA/40-185:0.14452):0.25609):0.04388,P70004_XENLA/40-184:0.26028):0.19413,CO8G_HUMAN/48-186:0.65938):0.08723):0.11657,((((((PGHD_FELCA/40-184:0.07812,(PGHD_BOVIN/40-184:0.09072,PGHD_PIG/38-182:0.09440):0.05172):0.05191,Q9N2C2_RABIT/40-184:0.11400):0.02367,PGHD_HUMAN/40-184:0.04757):0.06331,PGHD_MOUSE/40-184:0.09275):0.22770,((NGAL_MOUSE/48-195:0.21931,NGAL_HUMAN/48-193:0.12623):0.18362,Q9D265_MOUSE/4-149:0.48556):0.23631):0.07935,((LIPO_BUFMA/34-177:0.12224,Q91721_XENLA/35-178:0.19846):0.10985,Q8QFM7_CHICK/35-178:0.19923):0.04456):0.10317):0.05881,(EXFAB_CHICK/31-171:0.48514,Q8UWH4_CHICK/47-188:0.38786):0.08239):0.03474):0.13887):0.62382,((A1AG2_HUMAN/40-180:0.13925,Q29014_PIG/20-160:0.21922):0.03986,A1AG_RABIT/40-180:0.21721):0.08141):0.18549,A1AG_RAT/41-180:0.12456):0.05341,A1AG1_MUSCR/41-181:0.02951,A1AG3_MOUSE/40-180:0.10120);