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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00060 phylogeny
for restricted amino acid alignment


 
((((((((((Q9VIA5_DROME/402-675,Q9VVL2_DROME/601-875),Q9VVU7_DROME/338-606),Q19693_CAEEL/134-414),Q8T0V7_DROME/343-620),(((((NMD3A_RAT/674-952,NMD3B_HUMAN/574-852),(NME3_RAT/552-836,NME1_RAT/554-838)),(Q9BK17_CAEEL/565-858,(NMZ1_HUMAN/559-834,Q24418_DROME/573-853))),GRID2_RAT/566-852),((((O01623_CAEEL/566-865,((((GLR2_CAEEL/619-920,GLR1_CAEEL/591-877),(((Q9VSV5_DROME/630-977,GLK1_DROME/610-917),(GLRK_LYMST/556-840,Q9U0T0_LOLOP/568-851)),GRIA2_HUMAN/543-834)),Q9VDH5_DROME/545-833),((GRIK2_HUMAN/560-841,GRIK4_HUMAN/544-826),Q25412_LYMST/545-828))),(((Q9VMP4_DROME/554-839,O45028_DROME/553-839),Q9VPV3_DROME/579-865),Q9TVI0_DROME/547-830)),(((GLRK_RANBE/161-435,GLRK_XENLA/162-436),GLRK_ANAPL/168-441),(Q90278_CARAU/149-419,Q90279_CARAU/144-415))),(Q9VR32_DROME/544-862,Q9W365_DROME/518-828)))),GLR11_ARATH/540-791),GLR14_ARATH/568-820),(GLR34_ARATH/613-879,GLR37_ARATH/578-843)),GLR29_ARATH/566-830),GLR23_ARATH/580-848,GLR22_ARATH/580-852);
((((((((((Q9VIA5_DROME/402-675:1.03281,Q9VVL2_DROME/601-875:1.11082):0.14617,Q9VVU7_DROME/338-606:1.11691):0.47887,Q19693_CAEEL/134-414:1.39772):0.00000,Q8T0V7_DROME/343-620:1.19269):0.11616,(((((NMD3A_RAT/674-952:0.06230,NMD3B_HUMAN/574-852:0.24800):0.71847,(NME3_RAT/552-836:0.17520,NME1_RAT/554-838:0.07096):0.55683):0.26072,(Q9BK17_CAEEL/565-858:0.51740,(NMZ1_HUMAN/559-834:0.24129,Q24418_DROME/573-853:0.19601):0.22947):0.22523):0.51720,GRID2_RAT/566-852:0.63174):0.11040,((((O01623_CAEEL/566-865:0.73935,((((GLR2_CAEEL/619-920:0.26363,GLR1_CAEEL/591-877:0.14917):0.23200,(((Q9VSV5_DROME/630-977:0.09720,GLK1_DROME/610-917:0.20265):0.27827,(GLRK_LYMST/556-840:0.18355,Q9U0T0_LOLOP/568-851:0.18014):0.08263):0.04848,GRIA2_HUMAN/543-834:0.19771):0.05576):0.24215,Q9VDH5_DROME/545-833:0.34088):0.05822,((GRIK2_HUMAN/560-841:0.18606,GRIK4_HUMAN/544-826:0.37014):0.06478,Q25412_LYMST/545-828:0.31537):0.05340):0.07800):0.09041,(((Q9VMP4_DROME/554-839:0.24785,O45028_DROME/553-839:0.48484):0.11709,Q9VPV3_DROME/579-865:0.46040):0.30329,Q9TVI0_DROME/547-830:0.45558):0.08232):0.10785,(((GLRK_RANBE/161-435:0.19832,GLRK_XENLA/162-436:0.16862):0.10847,GLRK_ANAPL/168-441:0.25571):0.13486,(Q90278_CARAU/149-419:0.30299,Q90279_CARAU/144-415:0.25969):0.14456):0.41044):0.14659,(Q9VR32_DROME/544-862:0.43074,Q9W365_DROME/518-828:0.48198):0.37501):0.09597):0.14932):0.87588,GLR11_ARATH/540-791:0.52313):0.10319,GLR14_ARATH/568-820:0.46216):0.36899,(GLR34_ARATH/613-879:0.36586,GLR37_ARATH/578-843:0.36408):0.29059):0.12164,GLR29_ARATH/566-830:0.36446):0.43776,GLR23_ARATH/580-848:0.15609,GLR22_ARATH/580-852:0.09440);