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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00060 phylogeny
for nucleotide alignment


 
((((GLR2_CAEEL/619-920,GLR1_CAEEL/591-877),((GRIA2_HUMAN/543-834,(GLRK_LYMST/556-840,Q9U0T0_LOLOP/568-851)),(Q9VSV5_DROME/630-977,GLK1_DROME/610-917))),O01623_CAEEL/566-865),((GRIK2_HUMAN/560-841,(Q25412_LYMST/545-828,GRIK4_HUMAN/544-826)),Q9VDH5_DROME/545-833),((((((((Q9VIA5_DROME/402-675,Q9VVL2_DROME/601-875),Q9VVU7_DROME/338-606),(Q19693_CAEEL/134-414,((GLR14_ARATH/568-820,GLR11_ARATH/540-791),((GLR34_ARATH/613-879,GLR37_ARATH/578-843),(GLR29_ARATH/566-830,(GLR23_ARATH/580-848,GLR22_ARATH/580-852)))))),Q8T0V7_DROME/343-620),((Q9VMP4_DROME/554-839,Q9VPV3_DROME/579-865),O45028_DROME/553-839)),((GRID2_RAT/566-852,(((NMD3A_RAT/674-952,NMD3B_HUMAN/574-852),(NME3_RAT/552-836,NME1_RAT/554-838)),(Q9BK17_CAEEL/565-858,(NMZ1_HUMAN/559-834,Q24418_DROME/573-853)))),(Q9VR32_DROME/544-862,Q9W365_DROME/518-828))),(((GLRK_RANBE/161-435,GLRK_XENLA/162-436),GLRK_ANAPL/168-441),(Q90278_CARAU/149-419,Q90279_CARAU/144-415))),Q9TVI0_DROME/547-830));
((((GLR2_CAEEL/619-920:0.27832,GLR1_CAEEL/591-877:0.19465):0.24013,((GRIA2_HUMAN/543-834:0.22883,(GLRK_LYMST/556-840:0.21557,Q9U0T0_LOLOP/568-851:0.23182):0.09506):0.05468,(Q9VSV5_DROME/630-977:0.16313,GLK1_DROME/610-917:0.19803):0.22361):0.03807):0.08513,O01623_CAEEL/566-865:0.59434):0.06026,((GRIK2_HUMAN/560-841:0.25953,(Q25412_LYMST/545-828:0.26039,GRIK4_HUMAN/544-826:0.27415):0.06399):0.06468,Q9VDH5_DROME/545-833:0.30008):0.04892,((((((((Q9VIA5_DROME/402-675:0.69502,Q9VVL2_DROME/601-875:0.67637):0.11506,Q9VVU7_DROME/338-606:0.76005):0.16651,(Q19693_CAEEL/134-414:0.75639,((GLR14_ARATH/568-820:0.32322,GLR11_ARATH/540-791:0.34464):0.14315,((GLR34_ARATH/613-879:0.31188,GLR37_ARATH/578-843:0.31917):0.15355,(GLR29_ARATH/566-830:0.28560,(GLR23_ARATH/580-848:0.09398,GLR22_ARATH/580-852:0.05469):0.35212):0.09297):0.15202):0.35124):0.16904):0.06534,Q8T0V7_DROME/343-620:0.65226):0.08905,((Q9VMP4_DROME/554-839:0.18439,Q9VPV3_DROME/579-865:0.36241):0.10291,O45028_DROME/553-839:0.29291):0.21004):0.02723,((GRID2_RAT/566-852:0.49378,(((NMD3A_RAT/674-952:0.20970,NMD3B_HUMAN/574-852:0.19717):0.35118,(NME3_RAT/552-836:0.14790,NME1_RAT/554-838:0.16113):0.25326):0.14882,(Q9BK17_CAEEL/565-858:0.57555,(NMZ1_HUMAN/559-834:0.21147,Q24418_DROME/573-853:0.19455):0.10561):0.12792):0.23256):0.07815,(Q9VR32_DROME/544-862:0.31289,Q9W365_DROME/518-828:0.32970):0.23080):0.08759):0.06527,(((GLRK_RANBE/161-435:0.17098,GLRK_XENLA/162-436:0.19887):0.11820,GLRK_ANAPL/168-441:0.19036):0.06799,(Q90278_CARAU/149-419:0.27931,Q90279_CARAU/144-415:0.20745):0.15792):0.28573):0.05482,Q9TVI0_DROME/547-830:0.39615):0.07895);