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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF00056 - Ldh_1_N)
lactate/malate dehydrogenase, NAD binding domain
(
Pfam
reference: accession no.
PF00056
)
(
Interpro
reference: accession no.
IPR001236
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
30 sequences @ 175 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 13.41)
nucleotides
(available for above)
28 sequences @ 525 bp
(ave. pairwise identity: 0.44)
New Hampshire format
(total tree length: 11.20)
amino acids, restricted set
(corresp. to available nt seqs)
28 sequences @ 175 aa
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 13.09)