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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00054 alignment
(22 sequences with 173 aa)


CRB_DROME/1588-1728 FRLVLEVLCLY----.IDNVDG-------.--FFEIGVNGGRVTITWKLSALH--FGESARFEKE-NTDGEWSRIYLRAHNSKLEGGWK.GWES............MVDPTPAFSTDIDQAaFQSLIATStQVYLGGMPES.rQARGSTLSAQQGSQFKGCVGEARLGDLLLP
CRB_DROME/1283-1445 IRTREPTGQVF--YL.GTDPRKAPTKNIG.DSYVAAKLHGGELLVKMQFSGT----PEAYTVGGQKLDNGYNHLIEVVRNQTLVQVKLN.GTEYfrktl.sttgllDAQLLYLGGPAPTREsLLGATTEPgIIPVPGAGIPieDTTVPKEADDSRDYFKGIIQDVKVSNGSLN
PRTS_HUMAN/329-459 FRTYDSEGVIL--YA.ESIDHS-------.-AWLLIALRGGKIEVQLKNEHT----SKITTGGDV-INNGLWNMVSVEELEHSISIKIA.KEA-............VMDINKP-GPLFKPE.NGLLETK-.-VYFAGFPR-..-KVESELIKPINPRLDGCIR--SWNLMKQG
SHBG_HUMAN/75-205 VRTWDPEGVIF--YG.DTNPKD-------.-DWFMLGLRDGRPEIQLHNHWA----QLTVGAGPR-LDDGRWHQVEVKMEGDSVLLEVD.GEE-............VLRLRQVSGPLTSKR.HPIMRIA-.-LGGLLFP--..---ASNLRLPLVPALDGCLRRDSWLDKQAE
SHBG_RAT/76-206 FRTWDPEGVIF--YG.DTNTED-------.-DWFMLGLRDGQLEIQLHNLWA----RLTVGFGPR-LNDGRWHPVELKMNGDSLLLWVD.GKE-............MLCLRQVSASLADHP.QLSMRIA-.-LGGLLLP--..---TSKLRFPLVPALDGCIRRDIWLGHQAQ
PGG2_RAT/55-182 FSTSQPEALLL--LA.AGQTDH-------.---LLLQLQSGHLQVRLALGQN---ELSLQTPADTVLSDSTTHTVVLTVSNSWAVLSVD.GVLN............---TSAPIPKAS---.HLKVPYG-.-LFVGSSG--..-SLDLPYLKGISRPLRGCLHSAILNGRNLL
FAT_DROME/4156-4306 FATTKPNSLLL--YNyGMQSGGRS-----.-DFLAIELVHGRAYFSSGGART----AISTVIAGRNLADGGWHKVTATRNGRVMSLSVA.KCADsgdvcteclpgdSSCYADEVGPVG---.TLNFNKQP.-LMIGGLSSA..DPILERPGQVHSDDLVGCLHSVHIGGRALN
CRB_DROME/1050-1185 FRTTLPNGVLAFGTT.GEKNEP-------.-VSYILELINGRLNLHSSLLNK----WEGVFIGSK-LNDSNWHKVFVAINTSHLVLSAN.DEQ-............---AIFPVGSYETAN.NSQPSFPR.-TYLGGTIPN..LKSYLRHLTHQPSAFVGCMQDIMVNGKWIF
LAMA2_HUMAN/2368-2507 FRTFSSSALLM--YL.ATRDLR-------.-DFMSVELTDGHIKVSYDLGSG----MASVVSNQN-HNDGKWKSFTLSRIQKQANISIV.DIDTn..........qEENIATSSSGNNFGL.DLKADDK-.-IYFGGLPTL.rNLSMKARPEVNLKKYSGCLKDIEISRTPYN
SLIT_DROME/1204-1335 FSSAEQNGILM--YD.GQDAHL-------.----AVELFNGRIRVSYDVGNH----PVSTMYSFEMVADGKYHAVELLAIKKNFTLRVDrGLAR............--SIINEGSNDY---.-LKLTTP-.-MFLGGLPVDpaQQAYKNWQIRNLTSFKGCMKEVWINHKLVD
LAMA1_HUMAN/2920-3051 FRTSSQNGVLLGIST.AKVDAIGL-----.------ELVDGKVLFHVNNGAG-RITPAYEPKTATVLCDGKWHTLQANKSKHRITLIVD.GNA-............---VGAES-PHTQST.SVDTNNP-.-IYVGGYP--..-AGVKQKCLRSQTSFRGCLRKLALIKSPQV
LAMA2_HUMAN/2793-2921 VRTEAESGLLF--YM.AAINHA-------.-DFATVQLRNGLPYFSYDLGSG----DTHTMIPTK-INDGQWHKIKIMRSKQEGILYVD.GASN............--RTISPKKADI---.-LDVVGM-.-LYVGGLP--..INYTTRRIGPVTYSIDGCVRNLHMAEAPAD
LAMA1_HUMAN/2743-2872 IRTFASSGLIY--YM.AHQNQA-------.-DYAVLQLHGGRLHFMFDLGKG----RTKVSHPAL-LSDGKWHTVKTDYVKRKGFITVD.GRES............-PMVTVVGDGTM---.-LDVEGL-.-FYLGGLP--..SQYQARKIGNITHSIPACIGDVTVNSKQLD
AGRN_RAT/1811-1942 LRTEATQGLVL--WI.GKAAERA------.-DYMALAIVDGHLQLSYDLGSQ----PVVLRSTVK-VNTNRWLRIRAHREHREGSLQVG.NEAP............-VTGSSPLGATQ---.-LDTDGA-.-LWLGGLQKL..PVGQALPK-AYGTGFVGCLRDVVVGHRQLH
AGRN_CHICK/1807-1938 IKTEATQGLIL--WS.GKGLERS------.-DYIALAIVDGFVQMMYDLGSK----PVVLRSTVP-INTNHWTHIKAYRVQREGSLQVG.NEAP............-ITGSSPLGATQ---.-LDTDGA-.-LWLGGMERL..SVAHKLPK-AYSTGFIGCIRDVIVDRQELH
AGRN_RAT/1559-1694 FLARGPSGLLL--YN.GQKTDGKG-----.-DFVSLALHNRHLEFCYDLGKG----AAVIRSKEP-IALGTWVRVFLERNGRKGALQVG.DGPR............-VLGESPKSRKVPHT.MLNLKEP-.-LYIGGAP--..DFSKLARGAAVSSGFSGVIQLVSLRGHQLL
AGRN_CHICK/1564-1699 FLAKSPSGMIF--YN.GQKTDGKG-----.-DFVSLALHDGYLEYRYDLGKG----AAVLRSKEP-VPLNTWISVLLERSGRKGVMRIN.NGER............-VMGESPKSRKVPHA.FLNLKEP-.-FYVGGAP--..DFSKLARAAAISTSFYGAVQRISIKGVPLL
AGRN_RAT/1291-1422 FRALETEGLLL--YN.GNARGK-------.-DFLALALLDGRVQFRFDTGSG----PAVLTSLVP-VEPGRWHRLELSRHWRQGTLSVD.GETP............-VVGESPSGTDG---.-LNLDTN-.-LYVGGIPEE..QVAMVLDRTSVGVGLKGCIRMLDINNQQLE
AGRN_CHICK/1298-1428 FRATELSGLLL--YN.GQNRGK-------.-DFISLALVGGFVELRFNTGSG----TGVITSKVR-VEPGKWHQLVVNRNRRSGMLAVD.GEH-............-VSGESPTGTDG---.-LNLDTD-.-LFVGGAPED..QMAVVAERTAATVGLKGSIRLLDVNNQMYD
LAMA2_HUMAN/2174-2314 VKTAVADNLLF--YL.GSAKFI-------.-DFLAIEMRKGKVSFLWDVGSG----VGRVEYPDLTIDDSYWYRIVASRTGRNGTISVR.ALDGpkas....ivpsTHHSTSPPGYTILD-.-VDANAM-.-LFVGGLT--..-GKLKKADAVRVITFTGCMGETYFDNKPIG
LAMA2_HUMAN/2554-2695 FSTKNESGIILLGSG.GTPAPPRRKRRQTgQAYYVILLNRGRLEVHLSTGAR-TMRKIVIRPEPNLFHDGREHSVHVERTRGIFTVQVD.ENRR............---YMQNLTVEQP--.--IEVKK-.-LFVGGAP--..-PEFQPSPLRNIPPFEGCIWNLVINSVPMD
LAMA1_HUMAN/2514-2658 FATTNSSGIILAALG.GDVEKRGDREEAH.VPFFSVMLIGGNIEVHVNPGDGTGLRKALLHAPTGTCSDGQAHSISLVRNRRIITVQLD.ENNP............---VEMKLGTLVESR.TINVSN--.-LYVGGIP--..-EGEGTSLLTMRRSFHGCIKNLIFNLELLD