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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00043 phylogeny
for restricted amino acid alignment


 
((((((((LIGF_PSEPA/94-234,((YK67_CAEEL/108-219,LIGE_PSEPA/101-223),((GTZ1_DIACA/98-203,((((SC1_OCTDO/84-201,(SC1_OCTVU/83-200,SC2_OCTDO/84-201)),(SC04_OMMSL/177-288,(SC20_OMMSL/84-208,SC11_OMMSL/84-191))),SC4_OCTDO/84-201),(GT28_SCHJA/85-191,(((GTP_BOVIN/84-187,GTP1_CAEEL/82-186),((GT26_SCHJA/86-186,GT26_FASHE/86-186),((GSTM3_HUMAN/95-195,GSTM2_CHICK/91-191),(GSTM2_HUMAN/91-191,(GSTM2_RAT/91-191,GTMU_CRILO/91-191))))),(GTS1_DROME/129-235,((GTA3_CHICK/86-191,GTA4_MOUSE/87-192),(GTA2_MOUSE/86-191,(GTA1_HUMAN/86-191,GTC_MOUSE/86-191)))))))),GTY2_ISSOR/86-185))),GTH1_YEAST/101-218),((GT_ECOLI/88-189,GT_PROMI/88-189),URE2_YEAST/210-345)),(((((GTX1_SOLTU/83-192,GTX1_TOBAC/83-192),GTX6_SOYBN/87-198),((SSPA_ECOLI/88-193,SSPA_HAESO/89-194),(GTX4_TOBAC/87-195,GTXA_TOBAC/86-194))),(YIBF_ECOLI/85-192,(((((GTH1_MAIZE/92-200,GTH1_WHEAT/98-210),GTH3_MAIZE/93-202),(GTH1_TOBAC/94-202,GTH_SILCU/95-204)),(DCMA_METDI/105-220,(GTT1_RAT/92-199,GTT2_RAT/92-198))),PCPC_SPHCR/124-232))),GTA_PLEPL/96-202)),(EF1G_SCHPO/88-196,EF1G_TRYCR/92-198)),((EF1G1_YEAST/94-199,EF1G2_YEAST/91-196),SYV2_HUMAN/94-198)),EF1G_ARTSA/89-194),EF1G_HUMAN/92-197,EF1G1_XENLA/93-198);
((((((((LIGF_PSEPA/94-234:1.42916,((YK67_CAEEL/108-219:1.12673,LIGE_PSEPA/101-223:2.18081):0.38571,((GTZ1_DIACA/98-203:1.76259,((((SC1_OCTDO/84-201:0.13999,(SC1_OCTVU/83-200:0.07879,SC2_OCTDO/84-201:0.11582):0.06393):0.01825,(SC04_OMMSL/177-288:0.69022,(SC20_OMMSL/84-208:0.25369,SC11_OMMSL/84-191:0.57087):0.05930):0.12285):0.05810,SC4_OCTDO/84-201:0.06539):0.91533,(GT28_SCHJA/85-191:1.33965,(((GTP_BOVIN/84-187:0.35351,GTP1_CAEEL/82-186:0.87370):0.37002,((GT26_SCHJA/86-186:0.64174,GT26_FASHE/86-186:0.30947):0.18703,((GSTM3_HUMAN/95-195:0.19028,GSTM2_CHICK/91-191:0.36814):0.04480,(GSTM2_HUMAN/91-191:0.19225,(GSTM2_RAT/91-191:0.11564,GTMU_CRILO/91-191:0.18832):0.08783):0.10999):0.32127):0.39169):0.25639,(GTS1_DROME/129-235:1.46210,((GTA3_CHICK/86-191:0.28533,GTA4_MOUSE/87-192:0.28823):0.11470,(GTA2_MOUSE/86-191:0.20261,(GTA1_HUMAN/86-191:0.06610,GTC_MOUSE/86-191:0.25076):0.08435):0.18228):0.55870):0.12430):0.38347):0.07048):0.44199):0.34833,GTY2_ISSOR/86-185:1.36034):0.18734):0.05240):0.34874,GTH1_YEAST/101-218:1.84033):0.00000,((GT_ECOLI/88-189:0.12751,GT_PROMI/88-189:0.67544):1.24402,URE2_YEAST/210-345:1.54002):0.11325):0.05999,(((((GTX1_SOLTU/83-192:0.23763,GTX1_TOBAC/83-192:0.12338):0.17438,GTX6_SOYBN/87-198:0.34285):0.45526,((SSPA_ECOLI/88-193:0.00000,SSPA_HAESO/89-194:0.49606):1.71531,(GTX4_TOBAC/87-195:0.19487,GTXA_TOBAC/86-194:0.20012):0.04263):0.37342):1.05501,(YIBF_ECOLI/85-192:1.53325,(((((GTH1_MAIZE/92-200:0.29930,GTH1_WHEAT/98-210:0.31801):0.24834,GTH3_MAIZE/93-202:0.45905):0.12895,(GTH1_TOBAC/94-202:0.33068,GTH_SILCU/95-204:0.25021):0.22525):0.50105,(DCMA_METDI/105-220:1.14441,(GTT1_RAT/92-199:0.66429,GTT2_RAT/92-198:0.43432):0.31031):0.67972):0.22554,PCPC_SPHCR/124-232:1.19847):0.11097):0.08610):0.04332,GTA_PLEPL/96-202:1.15827):0.14291):0.37210,(EF1G_SCHPO/88-196:0.91816,EF1G_TRYCR/92-198:0.90478):0.14436):0.54271,((EF1G1_YEAST/94-199:0.25613,EF1G2_YEAST/91-196:0.50968):0.91406,SYV2_HUMAN/94-198:0.81865):0.11582):0.07914,EF1G_ARTSA/89-194:0.28361):0.13449,EF1G_HUMAN/92-197:0.15396,EF1G1_XENLA/93-198:0.11955);