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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00037 phylogeny
for amino acid alignment


 
((((((((((((((((((((O28894_ARCFU/233-256,(((O29005_ARCFU/283-306,O29569_ARCFU/313-336),O29628_ARCFU/305-328),O29628_ARCFU/277-300)),(O29339_ARCFU/32-55,(FER_METTE/33-56,(O26505_METTH/201-224,FER_METBA/33-56)))),(((((((FWDG_METKA/4-27,(FWDG_METJA/6-29,Q59576_METTF/5-28)),Q48941_METBA/267-290),O28624_ARCFU/73-96),(ASRC_SALTY/205-228,Q46178_CLOPE/86-109)),((((((NIFJ_ENTAG/737-760,((NIFJ_ECOLI/738-761,NIFJ_SYNY3/739-762),O83909_TREPA/745-768)),(Q24860_ENTHI/735-758,Q27088_TRIVA/727-750)),Q24982_GIALA/780-803),O26501_METTH/277-300),(((((O29595_ARCFU/559-582,O30290_ARCFU/84-107),O26323_METTH/189-212),Y726_METJA/162-185),HYCF_ECOLI/33-56),(O83022_RHOSH/128-151,HYFH_ECOLI/33-56))),(O26505_METTH/164-187,((O27754_METTH/19-42,IORA_PYRKO/618-641),(((Y1043_HAEIN/46-69,Y870_METJA/8-31),((VHUB_METJA/299-322,(VHUB_METVO/304-327,(MVHB_METFE/317-340,MVHB_METTH/318-341))),((VHCB_METVO/65-88,(Q48941_METBA/59-82,YDHY_ECOLI/176-199)),(O29575_ARCFU/135-158,FRDB_MYCTU/142-165)))),((O27009_METTH/283-306,(O28629_ARCFU/301-324,O27597_METTH/288-311)),O26208_METTH/163-186)))))),O28811_ARCFU/10-33),((((O27309_METTH/387-410,Y934_METJA/40-63),O25737_HELPY/81-104),(((O29968_ARCFU/9-32,(((((FER5_METJA/82-105,P95902_SULSO/263-286),O27854_METTH/216-239),O26866_METTH/334-357),FER1_METJA/23-46),Y1303_METJA/222-245)),(((O26840_METTH/199-222,O26840_METTH/227-250),((NAPF_HAEIN/73-96,(P77908_MOOTH/139-162,(O05397_BACSU/148-171,O34720_BACSU/141-164))),(O27242_METTH/65-88,O58710_PYRHO/62-85))),((PHF1_CLOPA/140-163,(Q9ZNE4_CLOPE/140-163,Q59262_CLOAB/139-162)),(O26208_METTH/192-215,O27847_METTH/4-27)))),((NUIM_TRYBB/85-108,(((((HYFH_ECOLI/68-91,HYCF_ECOLI/68-91),Q9ZJV9_HELPJ/114-137),(((O67337_AQUAE/120-143,O67386_AQUAE/121-144),NUIM_CAEEL/145-168),NQO9_THETH/91-114)),NUOI_ECOLI/92-115),NUOI_MYCTU/119-142)),((O26295_METTH/206-229,NUIC_MAIZE/97-120),(VHUB_METJA/94-117,(O59116_PYRHO/93-116,(Y51B_METJA/80-103,O59110_PYRHO/70-93))))))),(((Q27096_TRIVA/68-91,(Q46606_9DELT/188-211,O15614_ENTHI/69-92)),((O96948_9SPIT/203-226,((O08311_DESFR/59-82,(PHFL_DESVH/59-82,PHFL_DESVO/59-82)),(MVHB_METTH/387-410,(Q9ZNE4_CLOPE/183-206,Q59262_CLOAB/182-205)))),(((Q46508_DESFR/189-212,O52683_THEMA/179-202),((O05397_BACSU/191-214,(O27595_METTH/167-190,Q50743_METTF/186-209)),Q9ZBV9_STRCO/189-212)),(P77908_MOOTH/185-208,O87815_ALCEU/209-232)))),((O66748_AQUAE/189-212,((Y1303_METJA/103-126,Y934_METJA/65-88),Q48941_METBA/174-197)),(RPOD_ARCFU/196-219,FER1_METJA/53-76)))))),(((((VHUB_METVO/154-177,MVHB_METTH/170-193),((((O27597_METTH/134-157,(((DSRB_ARCFU/234-257,O93651_ARCPR/241-264),(Q9ZH17_DESTE/251-274,DSVB_DESVH/250-273)),O27009_METTH/137-160)),(HDRA2_METKA/288-311,(FWDF_METJA/149-172,((FWDF_METJA/237-260,Q48941_METBA/142-165),(((O28629_ARCFU/67-90,O27597_METTH/51-74),FWDF_METJA/66-89),(O52682_THEMA/601-624,O27009_METTH/54-77)))))),((((Y208_METJA/181-204,Y51A_METJA/138-161),(Y551_METJA/156-179,Y51A_METJA/63-86)),(((O27309_METTH/195-218,Y934_METJA/147-170),Y208_METJA/152-175),(O27009_METTH/98-121,Y1043_HAEIN/77-100))),(Y514_METJA/222-245,(((O26501_METTH/305-328,((O26505_METTH/230-253,O27309_METTH/146-169),O27309_METTH/350-373)),((FWDF_METJA/110-133,FWDF_METJA/189-212),O74028_METWO/187-210)),Y51A_METJA/32-55)))),((((O58640_PYRHO/85-108,O27309_METTH/417-440),((O27592_METTH/586-609,Q46507_DESFR/465-488),Y1303_METJA/375-398)),(((MVHB_METFE/277-300,VHCB_METVO/25-48),MVHB_METTH/278-301),(Q48941_METBA/316-339,Y1303_METJA/469-492))),(((O58711_PYRHO/67-90,O59657_METBA/35-58),((O27309_METTH/28-51,O27432_METTH/169-192),(Q48941_METBA/210-233,(VHUB_METJA/6-29,VHUB_METVO/4-27)))),(MVHB_METTH/2-25,MVHB_METFE/2-25))))),((O29082_ARCFU/105-128,(FERA_METJA/2-25,RPOD_METTH/196-219)),(O29082_ARCFU/75-98,(O26942_METTH/72-95,FER2_METJA/75-98)))),((((O08311_DESFR/28-51,(PHFL_DESVH/28-51,PHFL_DESVO/28-51)),((((O29309_ARCFU/48-71,(Y1303_METJA/174-197,Y749_METJA/187-210)),((FER3_ANAVA/20-43,FER3_PLEBO/20-43),FER3_RHOCA/18-41)),O30081_ARCFU/6-29),O26942_METTH/102-125)),(((((((NRFC_HAEIN/120-143,PSRB_WOLSU/86-109),(YDHX_ECOLI/117-140,PHSB_SALTY/89-112)),Q9Z4S8_SALTI/131-154),O93725_PYRAE/111-134),(((FDHB_WOLSU/84-107,(HYBA_ECOLI/138-161,(HMC2_DESVH/135-158,(FDNH_ECOLI/126-149,O67147_AQUAE/136-159)))),(YNFG_ECOLI/91-114,DMSB_HAEIN/92-115)),((O30285_ARCFU/84-107,HMEA_ARCFU/143-166),(O67279_AQUAE/99-122,O30062_ARCFU/90-113)))),(((O30289_ARCFU/60-83,O27770_METTH/65-88),((((YGFS_ECOLI/79-102,(YDHY_ECOLI/149-172,O83022_RHOSH/26-49)),((YGFT_ECOLI/80-103,(HYFA_ECOLI/75-98,HYCB_ECOLI/75-98)),(AEGA_ECOLI/80-103,(HYDN_ECOLI/82-105,(YFRA_PROVU/58-81,(YSAA_ECOLI/82-105,O66481_AQUAE/84-107)))))),COOF_RHORU/89-112),(O27749_METTH/72-95,O26208_METTH/72-95))),((O27769_METTH/62-85,O26501_METTH/197-220),(Y264_METJA/73-96,FER9_METJA/70-93)))),(O28140_ARCFU/30-53,O29312_ARCFU/93-116))),(FER2_METJA/105-128,((RNFB_HAEIN/103-126,RNFB_RHOCA/105-128),(((O26505_METTH/51-74,Y514_METJA/40-63),(Y51B_METJA/124-147,O26501_METTH/10-33)),(O27597_METTH/95-118,O26499_METTH/125-148)))))),((((((O29066_ARCFU/89-112,(Y51B_METJA/275-298,((O2903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