EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00036 - efhand)
EF hand
(Pfam reference: accession no. PF00036)
(Interpro reference: accession no. IPR002048)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
937 sequences @ 29 aa
(ave. pairwise identity: 0.26)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 477.60)
nucleotides
(available for above)
798 sequences @ 87 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 302.19)
amino acids, restricted set
(corresp. to available nt seqs)
798 sequences @ 29 aa
(ave. pairwise identity: 0.26)
New Hampshire format
(total tree length: 422.42)