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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00034 phylogeny
for amino acid alignment


 
((((C550_CYAPA/53-145,C550_MICAE/26-120),((QCRC_BACSU/181-253,(C553_DESVH/22-103,((CY4C_PSEPU/38-107,(((C554_THINE/2-91,(C55L_SYNY3/32-105,(((C550_THINO/1-101,((CY21_RHOFU/1-99,CY2_RHOVA/2-102),C550_NITWI/1-100)),CYC_TETPY/12-109),((CYC1_DROME/3-104,CY2_RHOGL/6-106),(((C550_AQUIT/1-111,CY2_RHOPH/2-113),(CY21_RHOPA/1-114,(C550_PARDE/23-139,C551_ROSDE/2-115))),CYCM_BRAJA/75-173))))),(C553_DESDN/2-80,(((C551_ECTHA/3-78,(C552_THETH/18-108,CYCA_ACEPO/317-407)),(((C555_CHLLT/1-85,(((CYC6_BRYMA/2-84,CYC6_EUGGR/1-79),CYC6_PLEBO/1-81),CYC6_ALAES/1-81)),QCRC_MYCTU/161-239),(Q8RJP0_9RHIZ/91-172,((CYCL_METEX/77-157,(O24761_HYPME/68-147,CYCL_PARDE/66-146)),(Q8RMH3_9PROT/66-146,Q9L933_METSS/65-145))))),((CYSD_CHLLT/12-83,CYSD_CHRVI/25-102),(C554_PARSP/2-83,CYC4_AZOVI/22-109))))),C555_METCA/32-110)),((((C551_CHRVI/4-80,CY2_RHOTE/1-87),C552_HYDTH/18-98),CY2_RHOGE/1-85),C551_PSEST/22-104)))),C550_BACSU/46-120)),COX2_BACSU/258-352),COX2_BACP3/262-354,COX2_BACPF/252-339);
((((C550_CYAPA/53-145:0.45238,C550_MICAE/26-120:0.35572):1.41381,((QCRC_BACSU/181-253:0.85673,(C553_DESVH/22-103:0.65515,((CY4C_PSEPU/38-107:1.40229,(((C554_THINE/2-91:0.53276,(C55L_SYNY3/32-105:0.62058,(((C550_THINO/1-101:0.45581,((CY21_RHOFU/1-99:0.63217,CY2_RHOVA/2-102:0.25860):0.15962,C550_NITWI/1-100:0.45692):0.06248):0.03875,CYC_TETPY/12-109:0.57441):0.05024,((CYC1_DROME/3-104:0.31167,CY2_RHOGL/6-106:0.58485):0.10765,(((C550_AQUIT/1-111:0.37297,CY2_RHOPH/2-113:0.56242):0.17235,(CY21_RHOPA/1-114:0.45879,(C550_PARDE/23-139:0.33440,C551_ROSDE/2-115:0.51408):0.17279):0.05988):0.14413,CYCM_BRAJA/75-173:0.52120):0.04873):0.03478):0.60558):0.64900):0.38713,(C553_DESDN/2-80:0.93553,(((C551_ECTHA/3-78:1.92262,(C552_THETH/18-108:0.89175,CYCA_ACEPO/317-407:0.71790):0.30577):0.31376,(((C555_CHLLT/1-85:0.83304,(((CYC6_BRYMA/2-84:0.40117,CYC6_EUGGR/1-79:0.43656):0.13858,CYC6_PLEBO/1-81:0.35824):0.09444,CYC6_ALAES/1-81:0.32618):0.38101):0.25788,QCRC_MYCTU/161-239:1.41288):0.22361,(Q8RJP0_9RHIZ/91-172:0.43948,((CYCL_METEX/77-157:0.07436,(O24761_HYPME/68-147:0.32045,CYCL_PARDE/66-146:0.30326):0.13662):0.12548,(Q8RMH3_9PROT/66-146:0.29645,Q9L933_METSS/65-145:0.13693):0.11600):0.59118):0.57204):0.08765):0.18109,((CYSD_CHLLT/12-83:0.38284,CYSD_CHRVI/25-102:0.73579):0.42747,(C554_PARSP/2-83:0.14489,CYC4_AZOVI/22-109:0.81388):0.62482):0.45061):0.03462):0.10738):0.11169,C555_METCA/32-110:1.60592):0.15644):0.04716,((((C551_CHRVI/4-80:0.43143,CY2_RHOTE/1-87:0.27530):0.14401,C552_HYDTH/18-98:0.36607):0.06449,CY2_RHOGE/1-85:0.88150):0.21995,C551_PSEST/22-104:0.17467):0.88766):0.28825):0.32663):0.35558,C550_BACSU/46-120:0.76089):0.40406):0.60705,COX2_BACSU/258-352:0.19871):0.15046,COX2_BACP3/262-354:0.24981,COX2_BACPF/252-339:0.51141);