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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00026 - Asp)
Eukaryotic aspartyl protease
(Pfam reference: accession no. PF00026)
(Interpro reference: accession no. IPR001461)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
23 sequences @ 516 aa
(ave. pairwise identity: 0.36)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 12.72)
nucleotides
(available for above)
21 sequences @ 1548 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 8.69)
amino acids, restricted set
(corresp. to available nt seqs)
21 sequences @ 516 aa
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 11.93)