EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00021 alignment
(42 sequences with 327 bp)


Q9TVA9_BOVIN/1-75 TGCTTACAGTGT---------GAGAACACGACGAGCTGC---------------AGTGTTGAAGAGTGTACTCCTGGTCAGGACCTC............TGCAGGACCACGGTCCTGAGTGTGTGGGAAGGTGGC...---AATGAGATGAACGTGGTGAGAAAAGGCTGTACCCATCCGGAC.................................AAGACC---AACAGG.....................TCCATGAGCTATCGGGCTGCTGAT...CAGATCATCACCCTTTCAGAGACCGTGTGCAGGTCAGACTTGTGCAAC
UPAR_HUMAN/25-99 TGCATGCAGTGT---------AAGACCAACGGGGATTGC---------------CGTGTGGAAGAGTGCGCCCTGGGACAGGACCTC............TGCAGGACCACGATCGTGCGCTTGTGGGAAGAAGGA...---GAAGAGCTGGAGCTGGTGGAGAAAAGCTGTACCCACTCAGAG.................................AAGACC---AACAGG.....................ACCCTGAGCTATCGGACTGGCTTG...AAGATCACCAGCCTTACCGAGGTTGTGTGTGGGTTAGACTTGTGCAAC
Q9R119_CRIGR/21-95 TGCATGCAGTGT---------GAGGACAGCCAGAACTGC---------------CTGGTGAAGGAGTGTGCCCTGGGCCAGGATCTT............TGCAGGACCACTGTGCTTCATGAATGGGAAGATGAT...---AACGAACTGGAGTTGGAGATGAGAGACTGCGCCCATTATGAG.................................AAAACC---AACAGG.....................ACCATGAGCTATCGCGTGAACTCA...AAGATCATCAGCCTGGCCGAGGTCGTGTGTGCCACAGACGTCTGCAAC
O35771_RAT/27-101 TGCATACAGTGC---------GAAAGTAACCAGGACTGC---------------CTGGTGGAGGAGTGTGCCCTGGGCCAGGACCTC............TGCAGAACCACGGTGCTTCGGGAATGGGAAGACGCC...---GAGGAGCTGGAGGTGGTGACCAGAGGCTGTGCCCACAAGGAG.................................AAGACC---AACAGG.....................ACCATGAGCTACCGCATGGGCTCG...GTGATCGTCAGCCTCACCGAGACCGTGTGTGCCACAAACCTCTGCAAC
PSCA_HUMAN/23-93 TGCTACTCCTGCAAAGCCCAGGTGAGCAACGAGGACTGC------------CTGCAGGTGGAGAACTGCACCCAGCTGGGGGAGCAG............TGCTGG---ACCGCGCGCATCCGCGCAGTTGGCCTCctgACCGTCATCAGCAAA------------GGCTGCAGCTTG------.................................AACTGCGTGGATGACtcacaggactactac......GTGGGCAAGAAGAAC---------...------------------ATCACGTGCTGTGACACCGACTTGTGCAAC
LY6E_CHICK/23-96 TGCTTTTCGTGCTCGGATGCATCCTCCAACTGGGCCTGC------------CTGACACCTGTCAAGTGTGCAGAGAATGAAGAACAC............TGTGTGACAACGTATGTCGGAGTGGGAATCGGTGGC...---AAGTCTGGCCAGTCCATCTCCAAAGGCTGCTCTCCC------.................................GTTTGCCCCAGT---.....................GCTGGGATTAACCTCGGCATTGCG...---GCTGCCTCCGTC------TACTGCTGCGACTCCTTCCTCTGCAAC
LY6E_HUMAN/23-99 TGCTTCTCCTGCTTGAACCAGAAGAGCAATCTGTACTGC------------CTGAAGCCGACCATCTGCTCCGACCAGGACAACTAC............TGCGTGACTGTGTCTGCTAGTGCCGGCATTGGGAATctcGTGACATTTGGCCACAGCCTGAGCAAGACCTGTTCCCCG------.................................GCCTGC---CCCATC.....................CCAGAAGGCGTCAATGTTGGTGTG...------GCTTCCATGGGCATCAGCTGCTGCCAGAGCTTTCTGTGCAAT
LY6E_MOUSE/23-99 TGCTTCTCATGTACCGATCAGAAGAACAATATAAACTGC------------CTGTGGCCAGTTTCATGCCAGGAGAAAGACCATTAC............TGTATCACGTTATCTGCCGCTGCGGGCTTTGGGAAT...GTCAACCTTGGCTACACCCTGAACAAGGGCTGCTCCCCG------.................................ATCTGCCCCAGT---.....................GAAAATGTCAATCTCAATCTCGGT...---GTGGCGTCCGTGAACAGCTACTGCTGCCAAAGCTCCTTCTGCAAC
LY6H_HUMAN/28-111 TGCCAGGACTGCACCCTGACCACCAACTCCAGCCATTGC---------------ACCCCAAAGCAGTGCCAGCCGTCCGACACGGTG............TGTGCCAGTGTCCGAATCACCGATCCCAGCAGCAGC...---AGGAAGGATCACTCGGTGAACAAGATGTGTGCCTCC------.................................TCCTGT---GACTTCgttaagcgacactttttctcaGACTATCTGATGGGGTTTATTAACtctGGGATCTTAAAGGTCGACGTGGACTGCTGCGAGAAGGATTTGTGCAAT
LYNX1_MOUSE/23-92 TGCCACGTGTGT------GCCTACAATGGAGACAACTGC------------TTCAAACCCATGCGCTGCCCAGCCATGGCCACCTAC............TGTATGACCACACGAACTTACTTCACC---------...---CCATACCGGATGAAGGTGAGGAAGTCCTGTGTCCCC------.................................AGCTGC------TTT.....................GAAACCGTGTACGATGGCTATTCC...AAGCAT---GCATCTGCCACCTCCTGTTGCCAGTACTACCTCTGCAAC
LY6D_MOUSE/23-93 TGTCACGTGTGC---------ACCAACAGTGCCAACTGT------------AAGAACCCTCAGGTCTGCCCGTCCAACTTCTACTTC............TGCAAAACCGTCACCTCAGTGGAGCCT---------...---CTGAATGGGAACCTGGTGAGGAAAGAGTGTGCAAAC------.................................TCATGC---ACCTCC.....................GACTACAGCCAGCAGGGCCATGTC...AGCAGTGGTTCCGAGGTCACACAATGCTGCCAGACTGACCTATGCAAC
LY6D_HUMAN/23-93 TGCCACGTGTGC---------ACCAGCTCCAGCAACTGC------------AAGCATTCTGTGGTCTGCCCGGCCAGCTCTCGCTTC............TGCAAGACCACGAACACAGTGGAGCCT---------...---CTGAGGGGGAATCTGGTGAAGAAGGACTGTGCGGAG------.................................TCGTGC---ACACCC.....................AGCTACACCCTGCAAGGCCAGGTC...AGCAGCGGCACCAGCTCCACCCAGTGCTGCCAGGAGGACCTGTGCAAT
CD59A_MOUSE/26-94 TGCTACCACTGT---TTCCAACCGGTGGTTTCTTCATGC------------AATATGAACAGCACTTGCTCTCCTGACCAGGATTCC............TGTCTCTATGCTGTA---------------------...---GCC---GGAATGCAAGTGTATCAAAGGTGTTGGAAACAATCA.................................GATTGT---CATGGT.....................GAGATCATTATGGACCAATTAGAA...GAGACA---AAATTAAAATTCAGATGCTGCCAGTTTAACTTGTGTAAC
CD59_RAT/25-92 TGCTACAACTGT------TTAGACCCGGTTTCTTCATGC------------AAAACAAACAGCACTTGCTCTCCTAACCTGGATGCT............TGTCTTGTTGCT------------------------...---GTATCCGGAAAGCAAGTCTATCAACAGTGTTGGAGATTTTCG.................................GATTGT---AATGCC.....................AAGTTCATTTTGAGCCGACTAGAA...ATCGCA---AACGTACAATACAGATGCTGCCAGGCGGACTTGTGTAAC
CD59_RABIT/28-95 TGTTACCACTGT------CTCCTCCCAAGTCCCAACTGT------------TCTACGGTCACCAACTGTACACCTAACCACGATGCA............TGTCTCACTGCT------------------------...---GTAAGCGGGCCGCGAGTGTACCGTCAGTGTTGGCGGTATGAA.................................GATTGC---AATTTT.....................GAGTTCATTTCCAACAGATTAGAA...GAGAAC---TCGTTAAAGTACAACTGCTGCCGCAAGGACCTGTGTAAT
CD59_PIG/28-96 TGCTATAACTGT------ATCAACCCAGCTGGTAGCTGC------------ACTACGGCCATGAATTGTTCACATAATCAGGATGCC............TGTATCTTCGTTGAA---------------------...---GCCGTGCCACCCAAAACTTACTACCAGTGTTGGAGGTTCGAT.................................GAATGC---AATTTC.....................GATTTCATTTCGAGAAACCTAGCG...GAGAAG---AAGCTGAAGTACAACTGCTGCCGGAAGGACCTGTGTAAC
CD59_HUMAN/28-95 TGCTACAACTGT------CCTAACCCAACTGCTGACTGC------------AAAACAGCCGTCAATTGTTCATCTGATTTTGATGCG............TGTCTCATTACC------------------------...---AAAGCTGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAG.................................CATTGC---AATTTC.....................AACGACGTCACAACCCGCTTGAGG...GAAAAT---GAGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTAAC
CD59_CERAE/28-95 TGCTACAACTGT------CCTAACCCAACTACTGACTGC------------AAAACAGCCATCAATTGTTCATCTGGTTTTGATACG............TGTCTCATTGCC------------------------...---AGAGCTGGGTTACAAGTATATAACCAGTGTTGGAAGTTTGCG.................................AATTGC---AATTTC.....................AATGACATTTCAACCCTCTTGAAG...GAAAGC---GAGCTACAGTACTTCTGCTGCAAGAAGGACCTGTGTAAC
CD59_SHV21/22-89 TGCTACAACTGT------TCTCACTCAACTATGCAGTGT------------ACTACATCTACTAGTTGTACATCTAATCTTGACTCT............TGTCTCATTGCT------------------------...---AAAGCTGGGTCAGGAGTATATTACAGGTGTTGGAAGTTTGAT.................................GACTGT---AGCTTT.....................AAACGTATCTCAAATCAATTGTCT...GAAACA---CAGTTAAAGTATCATTGTTGTAAGAAGAACTTGTGTAAT
CD59_AOTTR/28-95 TGCTACAGCTGT------CCTTACCCAACCACTCAGTGC------------ACTATGACCACCAACTGTACATCTAATCTTGATTCG............TGTCTCATTGCC------------------------...---AAAGCCGGGTCACGAGTATATTACCGGTGTTGGAAGTTTGAG.................................GATTGC---ACTTTC.....................AGCCGCGTTTCAAACCAATTGTCT...GAAAAT---GAGTTAAAGTATTACTGCTGCAAGAAGAACCTGTGTAAC
Q63318_RAT/29-105 TGCTACAGTTGCATAGAAGTCCCACTTAATGCTAACTGC---------------TCAACAGCTACCTGCCCCTACTCTGATGGAGTG............TGTGTTTCTCAGGTGTTAGAAGCTGTAGAGGGCTCT...---GTAAGACGGACAGCAAAGAGCAATCTCTGCCTTCCA------.................................ATCTGCCCCAAGTTT.....................CCTCAAAGAACCGAGATCCTGGGT...ACCGTTGTCTACACGAAGGTTTCCTGTTGCAATACAGATCTTTGCAAT
Q63316_RAT/5-82 TGCTACAATTGCACGATGATCCCATTTGGTAATACCTGC------------TCATCAACTGCTACCTGCCCCTACCCTGATGGAGTC............TGTGCTATTCAGGTGGCAGAAGTTGTTATGAGCTCT...---GTAAGACAGAAAGTAAAGGACCATATTTGCCTTCCC------.................................GTCTGCCCAACGAGT.....................CCTCAAACAACCGAGATCCTGGGT...ACTGTTGTCGACATGAAGATTTCCTGTTGCAATACAGATCTTTGCAAC
LY6I_MOUSE/29-105 TGTTACCAGTGCTATGGAGTCCCATTTGAGACTTCTTGC---------------CCATCATTTACCTGCCCCTACCCTGATGGATTC............TGTGTTGCTCAGGAGGAAGAATTTATTGCAAACTCT...---CAAAGAAAGAAAGTAAAGAGCCGTTCTTGCCATCCT------.................................TTCTGCCCTGATGAA.....................ATTGAAAAGAAGTTTATCCTGGAT...CCTAACACCAAGATGAATATTTCCTGTTGCCAGGAAGACCTCTGCAAT
LY6C_MOUSE/29-102 TGCTACGAGTGCTATGGAGTGCCAATTGAGACTTCCTGC---------------CCAGCAGTTACCTGCCGCGCCTCTGATGGATTC............TGCATTGCTCAAAACATAGAATTGATTGAGGACTCT...---CAAAGAAGGAAACTAAAGACCCGTCAGTGCCTTTCT------.................................TTCTGC---------.....................CCTGCTGGTGTGCCAATCAAGGAT...CCTAACATCAGGGAGAGGACTTCCTGTTGCAGCGAAGACCTCTGCAAT
LY6G_MOUSE/6-82 TGCTACAATTGTATTGGGGTCCCACCTGAGACTTCCTGC---------------AACACAACTACCTGCCCCTTCTCTGATGGATTT............TGCGTTGCTCTGGAGATAGAAGTTATTGTGGACTCT...---CACAGAAGCAAAGTCAAGAGCAATCTCTGCCTTCCC------.................................ATCTGCCCCACTACT.....................CTGGACAATACTGAGATCACTGGT...AATGCTGTCAACGTGAAGACTTACTGTTGCAAGGAAGACCTCTGCAAT
LY6F_MOUSE/29-105 TGCTATAACTGCCTGGGAGTTTCACTTGGAATTGCCTGC---------------AAATCAATTACCTGCCCCTACCCTGATGCAGTC............TGCATTTCTCAGCAGGTAGAACTTATTGTGGACTCT...---CAAAGAAGGAAAGTAAAGAACAAACTCTGCTTTCCT------.................................TTCTGCCCTGCTAAT.....................CTTGAAAATATGGAGATCCTGGGT...ACTACTGTCAACGTGAATACTTCCTGTTGCAAGGAAGACCTCTGCAAT
LY6A_MOUSE/29-105 TGTTACCAGTGCTATGGAGTCCCATTTGAGACTTCTTGC---------------CCATCAATTACCTGCCCCTACCCTGATGGAGTC............TGTGTTACTCAGGAGGCAGCAGTTATTGTGGATTCT...---CAAACAAGGAAAGTAAAGAACAATCTTTGCTTACCC------.................................ATCTGCCCTCCTAAT.....................ATTGAAAGTATGGAGATCCTGGGT...ACTAAGGTCAACGTGAAGACTTCCTGTTGCCAGGAAGACCTCTGCAAT
Q9D7Z7_MOUSE/133-212 TGCTATGCCTGCTTGGGGACCCACCCTGAAGAC---TGTTCCCCTGAGAAGTCCCGACGGGTCCAGTGCCACCAGGACCAGAGCGCC............TGTTTTCAGGGCAACGGCCGGATGAACATTGGCAAC...---TTCTCGGTGCCCGTGTACATCCGGACCTGTCACCGGCCC---.................................TCCTGC---ACCACC.....................ATGGGCACCACCAGCCCCTGGACA...TCCATC---GACCTGCAGGGTTACTGCTGCGAGGGCCACCTCTGCAAC
Q6PEX9_HUMAN/133-212 TGCTACGCCTGTATCGGGGTCCACCAGGATGAC---TGCGCTATCGGCAGGTCCCGACGAGTCCAGTGTCACCAGGACCAGACCGCC............TGCTTCCAGGGCAATGGCAGAATGACAGTTGGCAAT...---TTCTCAGTCCCTGTGTACATCAGAACCTGCCACCGGCCC---.................................TCCTGC---ACCACC.....................GAGGGCAGCACCAGCCCCTGGACA...GCCATC---GACCTCCAGGGCTCCTGCTGTGAGGGGTACCTCTGCAAC
O55162_RAT/142-224 TGCTACAGCTGTATGGGGCTGAGCCGCGAGAAG---TGCCAGGGCGCTATGCCGCCTGTCGTGAATTGCTACAATGCCAGCGGCCGTgtctacaagggcTGCTTCGATGGTAACGTCACCTTGACCGCAGCCAAT...---GTGACCGTGTCCTTACCTGTCCGAGGCTGCGTCCAGGACGAA.................................GCCTGC---ACCCGG.....................GATGGGGTGACGGGTCCAGGATTC...---------ACACTCAGCGGTTCCTGCTGTCAAGGGCCCCGCTGTAAC
UPAR_BOVIN/211-289 TGTTACAGCTGTGAGGGGAACGGCGCCCACAGGTGTTCCTCTGAAGAAACT---TTCCTCATTGACTGCCGCGGCCCTATGAATCAA............TGTCTGGAAGCGACAGGCACTAAAGGACTG------...---AGGAACCCAAGCTACACCATCAGAGGCTGCGCAGCCCCCTCG.................................TGGTGC---CAAAGC.....................CTCCACGTGGCTGAAGCCTTCGAC...CTCACC---CACGTCAACGTCTCGTGCTGTACTGGAAGTGGCTGTAAC
Q9R119_CRIGR/210-288 TGTTACAGCTGCGAGGGCAACAGCACCCACGGGTGTTCCTCCAAAGAGACT---TCCCTCGTTGACTGCCGGGGACCGATGGATCAG............TGCCTGGAGGCCACCGGCTTGGATGTGCTG------...---GCAAACCGGAGTCACACCGTGAGAGGCTGCTCGACGGCTTCC.................................TGGTGC---CCAGGC.....................TCCCATGTGGCAGATGCCTTCCTC...CTGAGC---CACCCCAACATCTCGTGCTGTGATGGCAGCGGCTGTAAT
O35771_RAT/216-295 TGTTACAGCTGTGAGGGGAACAGCACCTTTGGATGTTCCTACGAAGAGACG---TCCCTCATTGACTGCCGGGGACCAATGAATCAG............TGCTTGGAGGCTACAGGCTTAGATGTGCTGGGAAAC...---------CGGAGTTACACCGTAAGAGGCTGCGCCACGGCTTCC.................................TGGTGC---CAAGGT.....................TCCCACGTGGCCGACTCCTTCCAG...ACCCACGTCAACCTCTCTATCTCCTGCTGTAATGGCAGTGGCTGTAAC
UPAR_HUMAN/216-294 TGTTACAGCTGCAAGGGGAACAGCACCCATGGA---TGCTCCTCTGAAGAGACTTTCCTCATTGACTGCCGAGGCCCCATGAATCAA............TGTCTGGTAGCCACCGGCACTCACGAACCG------...---AAAAACCAAAGCTATATGGTAAGAGGCTGTGCAACCGCCTCA.................................ATGTGC---CAACAT.....................GCCCACCTGGGTGACGCCTTCAGC...ATGAAC---CACATTGATGTCTCCTGCTGTACTAAAAGTGGCTGTAAC
Q7L5R2_HUMAN/158-234 TGTCCAACCTGTGTGGCTTTGGGGACC---------TGTTTCAGTGCT---CCTTCT---CTTCCCTGTCCCAATGGTACAACTCGA............TGCTATCAAGGAAAACTTGAGATCACTGGAGGTGGC...---ATTGAGTCGTCTGTGGAGGTCAAAGGCTGTACAGCCATGATT.................................GGCTGC---AGGCTG.....................ATGTCTGGAATCTTAGCAGTAGGA...CCCATG---TTTGTGAGGGAAGCGTGCCCACATCAGCTGCTCACTCAA
Q9JMI7_MOUSE/141-217 TGCCCGACATGTGTGGCCCTGGGCTCC---------TGTTCCAGTGCC------CCCTCTATGCCCTGTGCCAATGGCACAACTCAG............TGCTATCAAGGAAGACTTGAATTCTCTGGAGGAGGC...---ATGGACGCCACCGTGCAAGTTAAAGGCTGCACCACTACGATC.................................GGCTGC---AGACTG.....................ATGGCCATGATAGACTCAGTGGGA...CCCATG---ACAGTGAAGGAGACCTGTAGTTACCAGTCATTCCTTCAG
Q7TQN2_CRIGR/143-219 TGCCCAACATGTGTGGCTCTGGGGTCG---------TGTTCCAGTGCC------CCGTCAATGCCCTGTGCCAACAGTACAACTCAG............TGCTATCAAGGAAAAATTGAGCTCTCCGGAGGAGGA...---ATGGACTCCGTTTTGCATATTAAAGGCTGCACCACTGCGATT.................................GGCTGC---AGACTC.....................ATGGCGGCAATTACCTCAGTGGGG...CCCATG---ACAGTAAAGGAGACTTGCAGCTACCACTCGCTCCTTCAG
Q924B5_RAT/141-217 TGCCCAACATGCTTGGCCCTGGAGCCC---------TGTTCCAGTGCC------CCCTCTATGCCCTGTGCCAATGGCACAACTCAG............TGCTACCACGGGAAGATCGAGCTCTCTGGAGGAGGC...---ATGGACTCCGTCGTGCATGTTAAAGGCTGCACCACTGCAATC.................................GGCTGC---AGACTG.....................ATGGCCAAGATGGAGTCGGTGGGA...CCCATG---ACAGTGAAAGAGACCTGTAGTTACCAGTCATTCCTTCAC
Q711Q2_HUMAN/133-210 TGCCCAGTCTGCTTGTCTATGGAAGGC---------TGTCTGGAGGGG---ACAACAGAAGAGATCTGCCCCAAGGGGACCACACAC............TGTTATGATGGTCTCCTCAGGCTCAGGGGAGGAGGC...---ATCTTCTCCAATCTGAGAGTCCAGGGATGCATGCCCCAGCCA.................................GTTTGC---AACCTG.....................CTCAATGGGACACAGGAATTTGGG...CCCGTG---GGTATGACTGAGAACTGCGATATGAAAGATTTTCTGCAG
Q8BVP6_MOUSE/142-233 TGTCCAAGCTGCGTGGGCAAGCACGACCAGGAA---TGTCTTCCAAGCTTTGTCACCACAGAGAATTGCCCCTTTGCTGCTTCCTCA............TGTTACAGTTCCACCTTAAAATTTCAAGCAGGGAAT...---CTCAATACCACCTTCCTCATCATGGGCTGTGCTCGTGACTCAcacaagcttttagcagattttcagcacattgggAGCATC---CGAGTG.....................ACTGAGGTCATCAATGTCCTAGATaagTCCGAGGCTGTCAGTGCAGGGCACTGCAGTCAAGGTATC------TCT
Q6UWN0_HUMAN/142-233 TGCCCGACCTGTGTGGGCGAGCACATGAAGGAT---TGCCTCCCAAATTTTGTCACCACTAATTCTTGCCCCTTGGCTGCTTCTACG............TGTTACAGTTCCACCTTAAAATTTCAGGCAGGGTTT...---CTCAATACCACCTTCCTCCTCATGGGGTGTGCTCGTGAACATaaccagcttttagcagattttcatcatattgggAGCATC---AAAGTG.....................ACTGAGGTCCTCAACATCTTAGAG...---AAGTCTCAGATTGTTGGTGCAGCATCCTCCAGGCAAGATCCTGCT
Q810N3_MOUSE/141-219 TGTCCTGTCTGC------TTGGATTTTAAGGGTTCTTGCAATACAGAGTCC---AACCATACCTTGTGCCCTAAGGACACGAAA---............TGCTATGCAGCTTCCTTGGGAGTGCATGGAGGTGAC...---CTCAGTGCCATTTTTAGCATTTCTGGATGCCTGAACTCATCT.................................CATACA---TACTTA.....................TTGAACAACCAAAATACAATTGGA...ATCATCAGTATAAAAGAAACCCTTGAGTCAAATGTCACTTTATCCTCA