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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00021 phylogeny
for nucleotide alignment


 
((((((((((LY6A_MOUSE/29-105,(LY6C_MOUSE/29-102,LY6I_MOUSE/29-105)),LY6F_MOUSE/29-105),LY6G_MOUSE/6-82),(Q63316_RAT/5-82,Q63318_RAT/29-105)),(((LY6D_HUMAN/23-93,LY6D_MOUSE/23-93),LYNX1_MOUSE/23-92),((((CD59_AOTTR/28-95,CD59_SHV21/22-89),(CD59_CERAE/28-95,CD59_HUMAN/28-95)),(((CD59_RAT/25-92,CD59A_MOUSE/26-94),CD59_RABIT/28-95),CD59_PIG/28-96)),LY6H_HUMAN/28-111))),(((((((Q924B5_RAT/141-217,Q9JMI7_MOUSE/141-217),Q7TQN2_CRIGR/143-219),Q7L5R2_HUMAN/158-234),(Q711Q2_HUMAN/133-210,Q810N3_MOUSE/141-219)),(Q6UWN0_HUMAN/142-233,Q8BVP6_MOUSE/142-233)),(O55162_RAT/142-224,(Q6PEX9_HUMAN/133-212,Q9D7Z7_MOUSE/133-212))),(UPAR_HUMAN/216-294,((O35771_RAT/216-295,Q9R119_CRIGR/210-288),UPAR_BOVIN/211-289)))),((LY6E_MOUSE/23-99,LY6E_HUMAN/23-99),LY6E_CHICK/23-96)),PSCA_HUMAN/23-93),(Q9TVA9_BOVIN/1-75,UPAR_HUMAN/25-99)),O35771_RAT/27-101,Q9R119_CRIGR/21-95);
((((((((((LY6A_MOUSE/29-105:0.04220,(LY6C_MOUSE/29-102:0.21509,LY6I_MOUSE/29-105:0.09250):0.08154):0.06029,LY6F_MOUSE/29-105:0.09396):0.04040,LY6G_MOUSE/6-82:0.12375):0.07750,(Q63316_RAT/5-82:0.11851,Q63318_RAT/29-105:0.11276):0.06600):0.53105,(((LY6D_HUMAN/23-93:0.18229,LY6D_MOUSE/23-93:0.15697):0.27962,LYNX1_MOUSE/23-92:0.44571):0.16615,((((CD59_AOTTR/28-95:0.03435,CD59_SHV21/22-89:0.20208):0.10572,(CD59_CERAE/28-95:0.05699,CD59_HUMAN/28-95:0.05426):0.06658):0.12737,(((CD59_RAT/25-92:0.10885,CD59A_MOUSE/26-94:0.20365):0.25009,CD59_RABIT/28-95:0.18335):0.02304,CD59_PIG/28-96:0.22311):0.03884):0.52369,LY6H_HUMAN/28-111:0.46993):0.03930):0.20026):0.00405,(((((((Q924B5_RAT/141-217:0.07911,Q9JMI7_MOUSE/141-217:0.04774):0.04654,Q7TQN2_CRIGR/143-219:0.09907):0.08468,Q7L5R2_HUMAN/158-234:0.23975):0.31777,(Q711Q2_HUMAN/133-210:0.22832,Q810N3_MOUSE/141-219:0.93877):0.19790):0.26357,(Q6UWN0_HUMAN/142-233:0.29727,Q8BVP6_MOUSE/142-233:0.06058):0.51764):0.27755,(O55162_RAT/142-224:0.31911,(Q6PEX9_HUMAN/133-212:0.05068,Q9D7Z7_MOUSE/133-212:0.17167):0.38884):0.18682):0.05851,(UPAR_HUMAN/216-294:0.15007,((O35771_RAT/216-295:0.09414,Q9R119_CRIGR/210-288:0.11500):0.13538,UPAR_BOVIN/211-289:0.10673):0.05442):0.51422):0.16094):0.12732,((LY6E_MOUSE/23-99:0.22715,LY6E_HUMAN/23-99:0.29621):0.12842,LY6E_CHICK/23-96:0.31678):0.21151):0.25341,PSCA_HUMAN/23-93:0.30060):0.59074,(Q9TVA9_BOVIN/1-75:0.21285,UPAR_HUMAN/25-99:0.11841):0.10118):0.02651,O35771_RAT/27-101:0.08864,Q9R119_CRIGR/21-95:0.14376);