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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00021 - UPAR_LY6)
u-PAR/Ly-6 domain
(Pfam reference: accession no. PF00021)
(Interpro reference: accession no. IPR001526)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
42 sequences @ 109 aa
(ave. pairwise identity: 0.27)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 26.29)
nucleotides
(available for above)
42 sequences @ 327 bp
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 15.12)
amino acids, restricted set
(corresp. to available nt seqs)
42 sequences @ 109 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 26.29)