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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00020 phylogeny
for restricted amino acid alignment


 
(((((((TNR1B_HUMAN/78-118,TNR1B_MOUSE/79-119),(VT2_SFVKA/64-104,CRMB_VARV/68-108)),(TNR1A_HUMAN/84-125,TNR1A_RAT/84-125)),((((TNR9_MOUSE/47-85,TNR7_HUMAN/65-104),TNR3_HUMAN/83-124),((TNR16_RAT/33-65,TNR6_MOUSE/44-78),TNR4_RAT/26-59)),(((TNR8_HUMAN/69-106,(TNR6_HUMAN/129-165,TNR6_MOUSE/125-161)),TNR4_RAT/62-102),(TNR16_RAT/68-108,TNR16_RAT/150-189)))),((TNR16_RAT/110-147,(TNR1A_HUMAN/127-166,TNR1A_RAT/127-166)),(TNR5_HUMAN/26-59,TNR5_MOUSE/26-59))),(((((TNR1B_HUMAN/40-75,TNR1B_MOUSE/40-76),(VT2_SFVKA/28-61,CRMB_VARV/32-65)),(TNR8_HUMAN/29-65,TNR7_HUMAN/27-62)),TNR3_HUMAN/43-80),(VA53_VACCC/37-72,(TNR6_HUMAN/85-127,TNR6_MOUSE/81-123)))),TNR1A_HUMAN/44-81,TNR1A_MOUSE/44-81);
(((((((TNR1B_HUMAN/78-118:0.10926,TNR1B_MOUSE/79-119:0.32050):0.28396,(VT2_SFVKA/64-104:0.45713,CRMB_VARV/68-108:0.19612):0.13764):0.45799,(TNR1A_HUMAN/84-125:0.09842,TNR1A_RAT/84-125:0.27984):0.08659):0.32374,((((TNR9_MOUSE/47-85:1.06372,TNR7_HUMAN/65-104:0.29513):0.68687,TNR3_HUMAN/83-124:0.69848):0.19065,((TNR16_RAT/33-65:0.58944,TNR6_MOUSE/44-78:0.76863):0.36120,TNR4_RAT/26-59:0.47819):0.16692):0.09988,(((TNR8_HUMAN/69-106:1.21375,(TNR6_HUMAN/129-165:0.37913,TNR6_MOUSE/125-161:0.28880):0.19954):0.32883,TNR4_RAT/62-102:0.59370):0.25867,(TNR16_RAT/68-108:0.83533,TNR16_RAT/150-189:0.52386):0.25023):0.30775):0.00000):0.30497,((TNR16_RAT/110-147:0.70506,(TNR1A_HUMAN/127-166:0.15054,TNR1A_RAT/127-166:0.36963):0.30193):0.22221,(TNR5_HUMAN/26-59:0.14350,TNR5_MOUSE/26-59:0.48384):0.24845):0.15896):0.17418,(((((TNR1B_HUMAN/40-75:0.29307,TNR1B_MOUSE/40-76:0.05841):0.23344,(VT2_SFVKA/28-61:0.51931,CRMB_VARV/32-65:0.31263):0.69616):0.27376,(TNR8_HUMAN/29-65:0.68560,TNR7_HUMAN/27-62:0.99493):0.41941):0.00000,TNR3_HUMAN/43-80:0.32531):0.20062,(VA53_VACCC/37-72:0.57763,(TNR6_HUMAN/85-127:0.11076,TNR6_MOUSE/81-123:0.14685):0.44960):0.26601):0.37817):0.46699,TNR1A_HUMAN/44-81:0.23161,TNR1A_MOUSE/44-81:0.00000);