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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00020 phylogeny
for nucleotide alignment


 
((((TNR6_HUMAN/85-127,TNR6_MOUSE/81-123),(TNR1A_HUMAN/44-81,TNR1A_MOUSE/44-81)),((TNR6_MOUSE/44-78,(((TNR6_HUMAN/129-165,TNR6_MOUSE/125-161),(TNR9_MOUSE/47-85,TNR7_HUMAN/65-104)),TNR4_RAT/62-102)),(TNR16_RAT/33-65,((TNR16_RAT/110-147,(TNR1A_HUMAN/127-166,TNR1A_RAT/127-166)),(((((VT2_SFVKA/64-104,CRMB_VARV/68-108),(TNR1B_MOUSE/79-119,TNR1B_HUMAN/78-118)),(TNR1A_HUMAN/84-125,TNR1A_RAT/84-125)),TNR8_HUMAN/69-106),TNR3_HUMAN/83-124))))),(TNR4_RAT/26-59,((TNR16_RAT/68-108,TNR16_RAT/150-189),(TNR8_HUMAN/29-65,((TNR5_HUMAN/26-59,TNR5_MOUSE/26-59),TNR7_HUMAN/27-62)))),((VA53_VACCC/37-72,(TNR1B_HUMAN/40-75,TNR1B_MOUSE/40-76)),((VT2_SFVKA/28-61,CRMB_VARV/32-65),TNR3_HUMAN/43-80)));
((((TNR6_HUMAN/85-127:0.08623,TNR6_MOUSE/81-123:0.10051):0.27383,(TNR1A_HUMAN/44-81:0.13467,TNR1A_MOUSE/44-81:0.05133):0.43259):0.05621,((TNR6_MOUSE/44-78:0.59856,(((TNR6_HUMAN/129-165:0.18424,TNR6_MOUSE/125-161:0.18085):0.23506,(TNR9_MOUSE/47-85:0.64133,TNR7_HUMAN/65-104:0.34701):0.18105):0.17170,TNR4_RAT/62-102:0.28101):0.16503):0.09566,(TNR16_RAT/33-65:0.37020,((TNR16_RAT/110-147:0.27247,(TNR1A_HUMAN/127-166:0.21306,TNR1A_RAT/127-166:0.11322):0.21017):0.21499,(((((VT2_SFVKA/64-104:0.26720,CRMB_VARV/68-108:0.29447):0.37079,(TNR1B_MOUSE/79-119:0.19538,TNR1B_HUMAN/78-118:0.16701):0.11226):0.24608,(TNR1A_HUMAN/84-125:0.09191,TNR1A_RAT/84-125:0.19275):0.19529):0.00000,TNR8_HUMAN/69-106:0.68719):0.06572,TNR3_HUMAN/83-124:0.37751):0.09085):0.13818):0.15709):0.11232):0.16428,(TNR4_RAT/26-59:0.35368,((TNR16_RAT/68-108:0.44869,TNR16_RAT/150-189:0.36276):0.34822,(TNR8_HUMAN/29-65:0.54286,((TNR5_HUMAN/26-59:0.16490,TNR5_MOUSE/26-59:0.26846):0.19219,TNR7_HUMAN/27-62:0.51879):0.00000):0.09525):0.08690):0.11136,((VA53_VACCC/37-72:0.53066,(TNR1B_HUMAN/40-75:0.19056,TNR1B_MOUSE/40-76:0.06813):0.17665):0.03653,((VT2_SFVKA/28-61:0.35880,CRMB_VARV/32-65:0.24233):0.36368,TNR3_HUMAN/43-80:0.24957):0.25300):0.20778);