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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00018 phylogeny
for restricted amino acid alignment


 
(((((((((((CSK_CHICK/12-68,CRKL_HUMAN/126-181),(NCK1_HUMAN/193-250,(SPK1_DUGTI/36-92,SSU81_YEAST/303-359))),(((RASA1_BOVIN/279-336,SLA1_YEAST/72-130),(BEM1_YEAST/75-130,SCD2_SCHPO/27-84)),((NCK1_HUMAN/5-59,(BTKL_DROME/345-400,(((BTK_HUMAN/217-272,TXK_HUMAN/85-140),TEC_HUMAN/182-237),ITK_HUMAN/174-229))),(SRC64_DROME/98-154,(((LYN_HUMAN/65-120,HCK_HUMAN/80-135),BLK_MOUSE/54-109),((STK_HYDAT/62-118,SRK1_SPOLA/57-114),FGR_HUMAN/80-136)))))),((ABL1_HUMAN/64-119,ABL_DROME/207-263),MYO3_YEAST/1124-1181)),(SEM5_CAEEL/1-56,DRK_DROME/1-56)),(((YHA2_YEAST/220-274,((((HCLS1_HUMAN/431-485,ABP1_SACEX/560-616),LASP1_CAEEL/269-325),MYOC_DICDI/1125-1181),(NCF2_HUMAN/460-514,(YKA7_CAEEL/194-250,YKA7_CAEEL/274-328)))),((MYSC_ACACA/979-1033,YFJ4_YEAST/317-373),(GRB2_CHICK/159-213,(SEM5_CAEEL/157-211,DRK_DROME/155-209)))),(((NCF1_HUMAN/159-213,STE6_SCHPO/3-58),CDC25_CANAL/33-92),(VAV_HUMAN/785-840,(((MYSB_ACACA/1093-1147,MYOB_DICDI/1056-1111),((PLCG1_BOVIN/794-849,PLCG2_HUMAN/772-827),RV167_YEAST/424-480)),YB65_SCHPO/587-642))))),((SPTA1_HUMAN/980-1034,SPTCA_DROME/973-1027),BUD14_YEAST/262-318)),NCF2_HUMAN/243-297),((NCF1_HUMAN/229-283,BOI2_YEAST/46-105),BZZ1_YEAST/496-553)),SLA1_YEAST/356-413),BEM1_YEAST/158-215,SCD2_SCHPO/126-183);
(((((((((((CSK_CHICK/12-68:0.63225,CRKL_HUMAN/126-181:0.45325):0.27375,(NCK1_HUMAN/193-250:0.42502,(SPK1_DUGTI/36-92:0.65933,SSU81_YEAST/303-359:0.63991):0.11030):0.18732):0.12153,(((RASA1_BOVIN/279-336:1.07853,SLA1_YEAST/72-130:0.42318):0.31577,(BEM1_YEAST/75-130:0.40851,SCD2_SCHPO/27-84:0.44005):0.49177):0.12043,((NCK1_HUMAN/5-59:0.50339,(BTKL_DROME/345-400:0.42245,(((BTK_HUMAN/217-272:0.29934,TXK_HUMAN/85-140:0.32996):0.09856,TEC_HUMAN/182-237:0.24064):0.12003,ITK_HUMAN/174-229:0.41841):0.18921):0.22029):0.17845,(SRC64_DROME/98-154:0.46989,(((LYN_HUMAN/65-120:0.28409,HCK_HUMAN/80-135:0.13046):0.17516,BLK_MOUSE/54-109:0.44700):0.04926,((STK_HYDAT/62-118:0.21381,SRK1_SPOLA/57-114:0.41066):0.07158,FGR_HUMAN/80-136:0.26814):0.12514):0.09105):0.15402):0.05494):0.15027):0.11666,((ABL1_HUMAN/64-119:0.28477,ABL_DROME/207-263:0.20770):0.12202,MYO3_YEAST/1124-1181:0.96168):0.35630):0.21566,(SEM5_CAEEL/1-56:0.10415,DRK_DROME/1-56:0.37372):0.38201):0.08183,(((YHA2_YEAST/220-274:0.38482,((((HCLS1_HUMAN/431-485:0.48267,ABP1_SACEX/560-616:0.52165):0.17542,LASP1_CAEEL/269-325:0.58892):0.13151,MYOC_DICDI/1125-1181:0.39017):0.05879,(NCF2_HUMAN/460-514:0.30603,(YKA7_CAEEL/194-250:0.94574,YKA7_CAEEL/274-328:0.51282):0.33015):0.45926):0.11948):0.11567,((MYSC_ACACA/979-1033:0.27726,YFJ4_YEAST/317-373:0.46228):0.09812,(GRB2_CHICK/159-213:0.37187,(SEM5_CAEEL/157-211:0.19509,DRK_DROME/155-209:0.29388):0.10672):0.26610):0.01123):0.11659,(((NCF1_HUMAN/159-213:0.47697,STE6_SCHPO/3-58:0.91390):0.31754,CDC25_CANAL/33-92:0.62182):0.15540,(VAV_HUMAN/785-840:0.57733,(((MYSB_ACACA/1093-1147:0.22123,MYOB_DICDI/1056-1111:0.35547):0.10323,((PLCG1_BOVIN/794-849:0.30515,PLCG2_HUMAN/772-827:0.22282):0.30551,RV167_YEAST/424-480:0.53708):0.12043):0.05435,YB65_SCHPO/587-642:0.50530):0.08418):0.06972):0.14912):0.16340):0.07481,((SPTA1_HUMAN/980-1034:0.27507,SPTCA_DROME/973-1027:0.13417):0.10572,BUD14_YEAST/262-318:1.64964):0.27249):0.31683,NCF2_HUMAN/243-297:0.82095):0.04890,((NCF1_HUMAN/229-283:0.96135,BOI2_YEAST/46-105:0.84607):0.27043,BZZ1_YEAST/496-553:0.68308):0.61235):0.25113,SLA1_YEAST/356-413:0.26849):0.78978,BEM1_YEAST/158-215:0.40793,SCD2_SCHPO/126-183:0.33640);