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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00018 phylogeny
for nucleotide alignment


 
((SSU81_YEAST/303-359,BZZ1_YEAST/496-553),((LASP1_CAEEL/269-325,SPK1_DUGTI/36-92),(((MYOC_DICDI/1125-1181,MYOB_DICDI/1056-1111),ABP1_SACEX/560-616),((((SLA1_YEAST/72-130,RASA1_BOVIN/279-336),((SCD2_SCHPO/27-84,BEM1_YEAST/75-130),BOI2_YEAST/46-105)),((SCD2_SCHPO/126-183,BEM1_YEAST/158-215),(YKA7_CAEEL/194-250,(NCF2_HUMAN/460-514,(YKA7_CAEEL/274-328,STE6_SCHPO/3-58))))),(((((((HCK_HUMAN/80-135,LYN_HUMAN/65-120),((FGR_HUMAN/80-136,BLK_MOUSE/54-109),(SRK1_SPOLA/57-114,STK_HYDAT/62-118))),(SRC64_DROME/98-154,NCK1_HUMAN/5-59)),(((((ITK_HUMAN/174-229,TEC_HUMAN/182-237),BTK_HUMAN/217-272),TXK_HUMAN/85-140),BTKL_DROME/345-400),(ABL_DROME/207-263,ABL1_HUMAN/64-119))),(CRKL_HUMAN/126-181,NCK1_HUMAN/193-250)),(((RV167_YEAST/424-480,(HCLS1_HUMAN/431-485,((MYSB_ACACA/1093-1147,(PLCG2_HUMAN/772-827,PLCG1_BOVIN/794-849)),VAV_HUMAN/785-840))),(((MYSC_ACACA/979-1033,(SPTCA_DROME/973-1027,SPTA1_HUMAN/980-1034)),(NCF1_HUMAN/159-213,NCF1_HUMAN/229-283)),((DRK_DROME/1-56,SEM5_CAEEL/1-56),CSK_CHICK/12-68))),(((DRK_DROME/155-209,SEM5_CAEEL/157-211),GRB2_CHICK/159-213),NCF2_HUMAN/243-297))),(((BUD14_YEAST/262-318,(MYO3_YEAST/1124-1181,CDC25_CANAL/33-92)),SLA1_YEAST/356-413),(YHA2_YEAST/220-274,YFJ4_YEAST/317-373)))))),YB65_SCHPO/587-642);
((SSU81_YEAST/303-359:0.26662,BZZ1_YEAST/496-553:0.58084):0.12890,((LASP1_CAEEL/269-325:0.28598,SPK1_DUGTI/36-92:0.52486):0.12156,(((MYOC_DICDI/1125-1181:0.29480,MYOB_DICDI/1056-1111:0.26159):0.00208,ABP1_SACEX/560-616:0.35810):0.07083,((((SLA1_YEAST/72-130:0.39814,RASA1_BOVIN/279-336:0.57578):0.02726,((SCD2_SCHPO/27-84:0.28766,BEM1_YEAST/75-130:0.31465):0.05440,BOI2_YEAST/46-105:0.65008):0.18989):0.09727,((SCD2_SCHPO/126-183:0.29186,BEM1_YEAST/158-215:0.39198):0.32753,(YKA7_CAEEL/194-250:0.51734,(NCF2_HUMAN/460-514:0.42268,(YKA7_CAEEL/274-328:0.32447,STE6_SCHPO/3-58:0.58584):0.10033):0.14447):0.00000):0.24060):0.05171,(((((((HCK_HUMAN/80-135:0.17786,LYN_HUMAN/65-120:0.29989):0.07269,((FGR_HUMAN/80-136:0.19453,BLK_MOUSE/54-109:0.31828):0.03927,(SRK1_SPOLA/57-114:0.26432,STK_HYDAT/62-118:0.37118):0.10452):0.08333):0.00000,(SRC64_DROME/98-154:0.25510,NCK1_HUMAN/5-59:0.56104):0.18263):0.09820,(((((ITK_HUMAN/174-229:0.41491,TEC_HUMAN/182-237:0.20167):0.08017,BTK_HUMAN/217-272:0.29694):0.10188,TXK_HUMAN/85-140:0.23478):0.10802,BTKL_DROME/345-400:0.36628):0.13944,(ABL_DROME/207-263:0.41722,ABL1_HUMAN/64-119:0.19179):0.11759):0.11961):0.09897,(CRKL_HUMAN/126-181:0.33921,NCK1_HUMAN/193-250:0.49807):0.19228):0.11866,(((RV167_YEAST/424-480:0.51692,(HCLS1_HUMAN/431-485:0.47505,((MYSB_ACACA/1093-1147:0.29830,(PLCG2_HUMAN/772-827:0.26392,PLCG1_BOVIN/794-849:0.16409):0.19623):0.01033,VAV_HUMAN/785-840:0.33569):0.07938):0.04404):0.03464,(((MYSC_ACACA/979-1033:0.18850,(SPTCA_DROME/973-1027:0.16713,SPTA1_HUMAN/980-1034:0.35684):0.24350):0.10032,(NCF1_HUMAN/159-213:0.39161,NCF1_HUMAN/229-283:0.44711):0.24003):0.03655,((DRK_DROME/1-56:0.24506,SEM5_CAEEL/1-56:0.29038):0.22825,CSK_CHICK/12-68:0.31731):0.21117):0.01714):0.13394,(((DRK_DROME/155-209:0.29810,SEM5_CAEEL/157-211:0.29372):0.08332,GRB2_CHICK/159-213:0.27768):0.06750,NCF2_HUMAN/243-297:0.56709):0.09208):0.00000):0.27175,(((BUD14_YEAST/262-318:0.65380,(MYO3_YEAST/1124-1181:0.48897,CDC25_CANAL/33-92:0.42343):0.06666):0.07921,SLA1_YEAST/356-413:0.48341):0.07439,(YHA2_YEAST/220-274:0.34048,YFJ4_YEAST/317-373:0.32198):0.02244):0.06259):0.08519):0.05975):0.10285):0.10550,YB65_SCHPO/587-642:0.43197);