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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00008 - EGF)
EGF-like domain
(Pfam reference: accession no. PF00008)
(Interpro reference: accession no. IPR006209)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
73 sequences @ 51 aa
(ave. pairwise identity: 0.35)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 58.55)
nucleotides
(available for above)
55 sequences @ 153 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 27.36)
amino acids, restricted set
(corresp. to available nt seqs)
55 sequences @ 51 aa
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 46.56)