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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00007 alignment
(24 sequences with 112 aa)


TSHB_ONCMY/19-125 VPMCVPTD---YTLYEERRECDFCVAINTTICMGFCYSRDsnMKELAGPRFLIQRGCTYDQVEYRTVILPGCPLHANPLFTYPVALSCHCG-.TCNTDSDECAHKASSGDGA
TSHB_ANGAN/19-125 LSICSPVD---YTLYVEKPECDFCVAINTTICMGFCYSLDpnVVGPAVKRLVVQRGCTYQAVEYRTAELPGCPPHVDPRFSYPVALHCTCR-.ACDPARDECTHRASADGDR
TSHB_HUMAN/19-125 MSFCIPTE---YTMHIERRECAYCLTINTTICAGYCMTRDinGKLFLPKYALSQDVCTYRDFIYRTVEIPGCPLHVAPYFSYPVALSCKCG-.KCNTDYSDCIHEAIKTNYC
TSHB_BOVIN/19-125 MSFCIPTE---YMMHVERKECAYCLTINTTVCAGYCMTRDvnGKLFLPKYALSQDVCTYRDFMYKTAEIPGCPRHVTPYFSYPVAISCKCG-.KCNTDYSDCIHEAIKTNYC
FSHB_RAT/19-123 CHSCELTN---ITISVEKEECRFCISINTTWCEGYCYTRD..LVYKDPARPNTQKVCTFKELVYETIRLPGCARHSDSLYTYPVATECHCG-.KCDSDSTDCTVRGLGPSYC
FSHB_BOVIN/18-122 CRSCELTN---ITITVEKEECGFCISINTTWCAGYCYTRD..LVYRDPARPNIQKTCTFKELVYETVKVPGCAHHADSLYTYPVATECHCS-.KCDSDSTDCTVRGLGPSYC
LSHB_RANCA/1-105 RHVCHLAN---ATISAEKDHCPVCITFTTSICTGYCQTMD..PVYKTALSSFKQNICTYKEIRYDTIKLPDCLPGTDPFFTYPVALSCYCD-.LCKMDYSDCTVESSEPDVC
GTH2_CTEID/32-136 LPPCEPVN---ETVAVEKEGCPKCLVFQTTICSGHCLTKE..PVYKSPFSTVYQHVCTYRDVRYETVRLPDCPPGVDPHITYPVALSCDCS-.LCTMDTSDCTIESLQPDFC
GTH2_ONCKE/26-130 MQPCQPIN---QTVSLEKEGCPTCLVIQTPICSGHCVTKE..PVFKSPFSTVYQHVCTYRDVRYETIRLPDCPPWVDPHVTYPVALSCDCS-.LCNMDTSDCTIESLQPDFC
GTH2_ANGAN/27-131 LLPCEPIN---ETISVEKDGCPKCLVFQTSICSGHCITKD..PSYKSPLSTVYQRVCTYRDVRYETVRLPDCRPGVDPHVTFPVALSCDCN-.LCTMDTSDCAIQSLRPDFC
GTH2_THUOB/3-107 LPPCQLIN---QTVSVEKEGCASCHPVETTICSGHCITKD..PVIKIPFSKVYQHVCTYRDFYYKTFELPDCPPGVDPTVTYPVALSCHCG-.RCAMDTSDCTFESLQPDFC
GTH2_FUNHE/24-128 LPRCQLLN---QTISLEKRGCSGCHRVETTICSGYCATKD..PNYKTSYNKAIQHVCTYGDLYYKTFEFPECVPGVDPVVTYPVALSCRCG-.GCAMATSDCTFESLQPDFC
LSHB_HUMAN/26-130 RPWCHPIN---AILAVEKEGCPVCITVNTTICAGYCPTMM..RVLQAVLPPLPQVVCTYRDVRFESIRLPGCPRGVDPVVSFPVALSCRCG-.PCRRSTSDCGGPKDHPLTC
CGHB_HUMAN/26-130 RPRCRPIN---ATLAVEKEGCPVCITVNTTICAGYCPTMT..RVLQGVLPALPQVVCNYRDVRFESIRLPGCPRGVNPVVSYAVALSCQCA-.LCRRSTTDCGGPKDHPLTC
CGHB_PAPAN/26-130 RPLCRPIN---ATLAAEKEACPVCVTVNTTICAGYCPTMM..RVLQAVLPPVPQVVCNYREVRFESIRLPGCPPGVDPMVSVPVALSCRCA-.LCRRSTSDCGGPKDHPLTC
LSHB_HORSE/26-130 RPLCRPIN---ATLAAEKEACPICITFTTSICAGYCPSMV..RVMPAALPAIPQPVCTYRELRFASIRLPGCPPGVDPMVSFPVALSCHCG-.PCQIKTTDCGVFRDQPLAC
GTH1_THUOB/5-99 SYGCHPKN---ISISVES--CGITEFILTTICEGQCYLED..PVYISHD---EQKICNG-DWSYEVKHIEGCPVG----VTYPVARNCECT-.ACNTGNTYCGRLPGYVPSC
GTH1_FUNHE/17-114 CFGCHLKN---VSIPMER--CGQRVCIHTTICEGLCFSED..AVFESPDEAPEHRVCNG-DWSYEVKHIQGCPES----ITYPVATNCYCS-.ACNTKDTYCTRLYAHIPSC
GTH1_ONCKE/29-130 RYGCRLNN---MTIIVEREDCHG--SITITTCAGLCETTD..LNYQSTWLPRSQGVCNFKEWSYEKVYLEGCPSGVEP-FFIPVAKSCDCI-.KCKTDNTDCDRISMATPSC
NOV_CHICK/255-348 GKKCIQTKKSMKAVRFEYKNCTSVQTYKPRYC-GLCN---..----DGR-------CCTPHNTKTIQVEFRCPQGKFLKKPMMLINTCVCHG.NCPQSNNAFFQPLDPMSSE
CTGF_HUMAN/253-346 GKKCIRTPKISKPIKFELSGCTSMKTYRAKFC-GVCT---..----DGR-------CCTPHRTTTLPVEFKCPDGEVMKKNMMFIKTCACHY.NCPGDNDIFESLYYRKMYG
CYR61_MOUSE/281-374 GKKCSKTKKSPEPVRFTYAGCSSVKKYRPKYC-GSCV---..----DGR-------CCTPLQTRTVKMRFRCEDGEMFSKNVMMIQSCKCNY.NCPHPNEASFRLYSLFNDI
CEF10_CHICK/278-371 GKKCTKTKKSPSPVRFTYAGCSSVKKYRPKYC-GSCV---..----DGR-------CCTPQQTRTVKIRFRCDDGETFTKSVMMIQSCRCNY.NCPHANEAYPFYRLVNDIH
MUC2_HUMAN/5072-5176 RVPCSTVP---VTTEVSYAGCT--KTVLMNHCSGSCGTFV..MYSAKAQALDHSCSCCKEEKTSQREVVLSCPNGGSLTHTYTHIESCQCQDtVCGLPTGTSRRARRSPRHL