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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00007 - Cys_knot) |
| Cystine-knot domain |
| (Pfam reference: accession no. PF00007) |
| (Interpro reference: accession no. IPR006208) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
24 sequences @ 112 aa (ave. pairwise identity: 0.35) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 12.00) |
| nucleotides (available for above) |
20 sequences @ 336 bp (ave. pairwise identity: 0.47) |
New Hampshire format (total tree length: 6.87) |
|
amino acids, restricted set (corresp. to available nt seqs) |
20 sequences @ 112 aa (ave. pairwise identity: 0.34) |
New Hampshire format (total tree length: 11.06) |