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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF00005 - ABC_tran) |
| ABC transporter |
| (Pfam reference: accession no. PF00005) |
| (Interpro reference: accession no. IPR003439) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
65 sequences @ 333 aa (ave. pairwise identity: 0.26) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 57.19) |
| nucleotides (available for above) |
60 sequences @ 999 bp (ave. pairwise identity: 0.39) |
New Hampshire format (total tree length: 34.13) |
|
amino acids, restricted set (corresp. to available nt seqs) |
60 sequences @ 333 aa (ave. pairwise identity: 0.27) |
New Hampshire format (total tree length: 53.34) |