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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00003 alignment
(29 sequences with 292 aa)


O73636_FUGRU/608-859 LAVFSVGG.-ACLAVITAAVFFHHRTSPIVRANNSELSFLLLFSLTLCFLCSLTFIGA-.--.--PSHLSCMLRHTAFGITFVLCISCVLGKTVVVLMAFR-ATLPGSN-VMKWFGPPQQRMTVVTFTSIQ..VLICIVWLVVNPPFPVRNLTTYKER-------......---IILECALGSS.VGFWAVLGYIGLLAAVCLVLAVLARKLP-DNFNEAKMITFSM---LIFCAVWITFIPAYVSSPG---.--KFTVAVEIFAILASSFGLILCIFAPKCFIILFKPEKN
O93552_CARAU/574-825 LVFFSLFG.-VGLTLLVAILFYNKKDTPMVKANNSELSFLLLFSLTLCFLCSLTFIGR-.--.--PTEWSCMLCHTAFGITFVLCISCVLGKTIVVLMAFK-ATLPGNN-IMKWFGPAQQRLSVLAFTLIQ..VIICVLWLTISPPFPYKNMKYYKEK-------......---IILECSLGST.IGFWAVLTYISLLAFLCFILAFLARTLP-DKFNEAKFITFSM---LIFCAVWITFIPAYVSSPG---.--KFTVAVEIFAILSSSFGLLFGIFAPKCYIILLKPEQN
O93553_CARAU/589-840 LTTISLVG.-AFITIIIAVIFFRYKNTPIVKANNSELSFLLLFSLMLCFLCSLTFIGR-.--.--PTEWSCMLRHTAFGITFVLCISCVLGKTIVVLMAFR-ATLPGSN-VMKWFGPPQQRLSVFSFTLIQ..VIICVLWLTIYPPFPFKNLNYFKEK-------......---IILECNVGSV.VGFWAVLGYIGLLAILCFFLAFLARKLP-DNFNEAKFITFSM---LIFCAVWIAFIPAYVSSPG---.--KFTVAVEVFAILASTYGMLFCIFIPKCYIILLKPDKN
O73638_FUGRU/594-844 LAAVSLFG.-AALTSLVFCVFFRFRHTPLVKASNSELSFLLLFSLTLCFLCSLTFIGR-.--.--PSRWSCVLRHTAFGITFALCMSCVLAKTVAVLFAFT-AKRPGNT-VFYCSVP-LQRTSVFACITLQ..VIICVLWLTLAPPHPHKNTAHAKER-------......---IILECNLGSP.VWFWVVLGYIGLLAVICFILAFLARKLP-DNFNEAKFITFSM---LIFCAVWVTFIPAYVSSPG---.--KFTVAVEIFAILASSFGLLFCIFAPKCYILILKPEKN
O73639_FUGRU/617-868 LLVVSLIG.-SFLTCAVALVFFYHRTSPIVRANNSDLSFLLLFSLTLCFLCSLTFISP-.--.--PSQWSCMLRHTAFGITFVLCISCILGKTIVVLMAFR-ATLPGSD-VMKWFGPGKQKAIITFSTLVQ..VVICTVWLVVAPPTPRQYMPRESAI-------......---IILLCDEGST.IAFSLVLGYIGVLACMCFLLAFLARKLP-DNFNEARLIAFSM---LIFCAVWVAFVPAYISSPG---.--KYSTLTEIFAILASSYGLLGCIFAPKCYIILMKSEKN
O73640_FUGRU/613-867 LTAVAVSG.-AVVTTAVFVVFLHYRHTPMVRANNSELSFLLLLSLKLCFLCSLVFIGR-.--.--PSVWSCRFQQAAFGISFVLCVSCLQVKTIVVLAAFR-SARPGAGALMKWFGPSQQRGSVCIFTCVQarVIICIVWLSLSPPVPQADLDVPGLQ-------......---VTLECAMASV.VGFSLVLGYIGLLACTCLLLAFLARKLP-DNFNEAKLITFSM---LIFCAVWVAFVPAYISSPG---.--KYSVAVEIFAILASSYGLLFCIFAPKCFIILLRPEKN
O73637_FUGRU/604-856 LTAASLLG.-TVISVVVLGIFIHHRSTPVVRANNSELSFLLLVSLKLCFLCSLLFIGR-.--.--PRLWTCQLRHAAFGISFVLCVSCILVKTMVVLAVFR-ASKPGGGATLKWFGAVQQRGTVLGLTSIQ..AAICFAWLLSSSPKPHKNIQYHKDK-------......---IVFECVVGST.VGFAVLLSYIGLLAILSFLLAFLARNLP-DNFNEAKLITFSM---LIFCAVWVAFVPAYINSPG---.--KYADAVEVFAILTSSFGLLVALFGPKCYIILFRPERN
CASR_HUMAN/616-867 LTLFAVLG.-IFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLCCFSSSLFFIGE-.--.--PQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFE-AKIPTSF-HRKWWGLNLQFLLVFLCTFMQ..IVICVIWLYTAPPSSYRNQELEDEI-------......---IFITCHEGSL.MALGFLIGYTCLLAAICFFFAFKSRKLP-ENFNEAKFITFSM---LIFFIVWISFIPAYASTYG---.--KFVSAVEVIAILAASFGLLACIFFNKIYIILFKPSRN
O35268_RAT/599-850 LSLMALC-.LAALTVVVLGVFVKHHRTPIVKANNCTLTYILLIALIFCFLCPLFFIGH-.--.--PNSATCILQQITFGVVFTVAISTVLAKTTTVILAFR-VTAPHRM-MKYFLVSRASNYIIPICTLIQ..IIVCAIWLGASPPSVDIDAQSEHGH-------......---IIIACNKGSV.TAFYCVLGYLACLAFVSFTLAFLSRNLP-VTFNEAKSMTFSM---LVFCSVWVTFLPVYHGTKG---.--KVMVAVEIFSTLASSAGMLGCIFAPKCYTILFRPDRN
O35266_RAT/506-757 LALIAFC-.LSAFTAVVLWVFVKHHDTPIVKANNRILSYILIMSLMFCFLCSFFFIGH-.--.--PNRGTCILQQITFGIVFTVAVSTVLAKTITVILAFK-LRDPGRS-LRNFLVSGAPNYIIPICSLLQ..CILCAIWLAVSPPFVDIDEHSEHGH-------......---IMIVCNKGSI.MAFYCVLGYLACLALGSFTTAFLAKNLP-DTFNEAKFLTFSM---LVFCSVWVTFLPVYHSTRG---.--RVMVAVEIFSILASSAGMFGCIFAPKIYIILMKPERN
O35189_MOUSE/588-839 LGCMALS-.FSAITILILVTFVKYKDTPTVKANNRILSYILLISLVFCFLCSLLFIGP-.--.--PDQVTCIFQQTTFGVLFTVSVSTVLAKTITVVMAFK-LTTPGRR-MRGMMMTGAPKLVIPICTLIQ..LVLCGIWLVTSPPFIDRDIQSEHGK-------......---IVILCNKGSV.IAFHVVLGYLGSLALGSFTLAFLARNLP-DTFNEAKFLTFSM---LVFCSVWITFLPVYHSTRG---.--RVMVVVEVFSILASSAGLLMCIFVPKCYVILIRPDSN
O35267_RAT/404-655 LAILALC-.FSALTAFVLSIFLKHQETPTVKANNRTLSYVLLISLISCFLCSLLFIGH-.--.--PSFTTCIMQQTTFAVVFTVAASTVLAKTIIVILAFK-VTNTSRK-MRWLLVSGAPKFIIPICTMIQ..LILCGIWLGTSPPFVDADGHVEKGH-------......---ILIFCNKGSI.LAFYCVLGYLVSIAIASFTLAFFARNLP-DTFNEAKFLTFSM---LVFCSVWVTFLPVYHSTKG---.--KSMVAVEVFCILASSAGLLFCIFAPKCFIILLRPEKK
O35265_RAT/279-530 LTLMSLG-.FFVVTGLVIGVFIIHRNTPIVKANNRSLSYILLITLTLCFLCPLLFIGL-.--.--PNTATCILQQNLFGLLFTVALSTVLAKTITVVMAFK-ITAPGRK-TRWLLILRAPQFIIPLCALMQ..ILFSGIWLGTSPPFVDMDAHSEHGH-------......---IIILCNKGSA.IGFYCTLAYLGVMAFGSYLLAFMSRNLP-DTFNESKALAFSM---LMFCSVWVTFLPVYHSTTG---.--KVRVAMEMFSILASSASILTLIFVPKCYIVLFRPERN
O35269_RAT/511-762 LCFMSLG-.FSSLTAAVLVVFLKNRDTPIVKANNLALSYTLLITLMLCFLCPLLFIGR-.--.--PSTASCILQQNIFGLLFTVALSTVLAKTITVVIAFK-ITSPGRI-RRWLLISRAPNFIIPLCTLLQ..VFLSGIWLTTSPPFIDKDAHSEHGH-------......---IIIICNKGSA.VAFHCNLGYLGALALVSYFMAFLSRNLP-DTFNEAKFLAFSM---LVFCSVWVTFLPVYHSTKG---.--KNMVAMEVFSILASSTSLLGIIFAPKCYLILLRPERN
O70409_MOUSE/597-848 LVSLAIS-.LSAFSAMILGLFICYRETPIVRANNRNLSYLLLISLKLCFFCSLIFIGQ-.--.--PRTVTCVLRQIIFGIVFSIVISAILAKTFIVVVAFK-AIKPGSI-LKMGMVTRLSNAIVCCGSIIQ..VCICAVWLGTYPPFPDVDMHSEFGQ-------......---IILWCNEGST.LAFYCVLGYLGFLASLSLLIAFLARRLP-DSFNEAKTITFSM---LVFCSVWISFVPAYLSSKG---.--KTMVAVEILSILASSAGLLGCIFLPKCYVILLKSGGH
O70410_MOUSE/624-874 LVILSIFG.-ALVVLAVTVVYVIHRHTPLVKANDRELSFLIQMSLVITVLSSLLFIGK-.--.--PCNWSCMARQITLALGFCLCLSSILGKTISLFFAYR-ISVSKTR--LISMHPIFRKLIVLVCVVGE..IGVCAAYLVLEPPRMFKNIEIQNVK-------......---IIFECNEGSV.EFLCSIFGFDVLRALLCFLTTFVARQLP-DNYYEGKCITFGM---LVFFIVWISFVPAYLSTKG---.--KFKVAVEIFAILASSYGLLGCLFLPKCFIILLRPKRN
MGR1_RAT/596-845 AIAFSCLG.-ILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAK-.--.--PTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVIIASILISVQ..LTLVVTLIIMEPPMP-ILSYPSIKE-------......---VYLICNTSN-.LGVVAPVGYNGLLIMSCTYYAFKTRNVP-ANFNEAKYIAFTM---YTTCIIWLAFVPIYFGSNY---.----KIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERN
MGR5_RAT/582-831 AVVFACLG.-LLATLFVTVIFIIYRDTPVVKSSSRELCYIILAGICLGYLCTFCLIAK-.--.--PKQIYCYLQRIGIGLSPAMSYSALVTKTNRIARILAGSKKKICTKKPRFMSACAQLVIAFILICIQ..LGIIVALFIMEPPDI-MHDYPSIRE-------......---VYLICNTTN-.LGVVTPLGYNGLLILSCTFYAFKTRNVP-ANFNEAKYIAFTM---YTTCIIWLAFVPIYFGSNY---.----KIITMCFSVSLSATVALGCMFVPKVYIILAKPERN
MGR4_HUMAN/591-852 PLFLAVVG.-IAATLFVVITFVRYNDTPIVKASGRELSYVLLAGIFLCYATTFLMIAE-.--.--PDLGTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQG--KRSVSAPRFISPASQLAITFSLISLQ..LLGICVWFVVDPSHSVVDFQDQRTLDP----R......FARGVLKCDISD-.LSLICLLGYSMLLMVTCTVYAIKTRGVP-ETFNEAKPIGFTM---YTTCIVWLAFIPIFFGTSQSAD.KLYIQTTTLTVSVSLSASVSLGMLYMPKVYIILFHPEQN
MGR7_RAT/594-855 PVFLAMLG.-IIATIFVMATFIRYNDTPIVRASGRELSYVLLTGIFLCYIITFLMIAK-.--.--PDVAVCSFRRVFLGLGMCISYAALLTKTNRIYRIFEQG--KKSVTAPRLISPTSQLAITSSLISVQ..LLGVFIWFGVDPPNIIIDYDEHKTMNP----E......QARGVLKCDITD-.LQIICSLGYSILLMVTCTVYAIKTRGVP-ENFNEAKPIGFTM---YTTCIVWLAFIPIFFGTAQSAE.KLYIQTTTLTISMNLSASVALGMLYMPKVYIIIFHPELN
MGR6_RAT/583-844 PLLLAVLG.-IMATTTIMATFMRHNDTPIVRASGRELSYVLLTGIFLIYAITFLMVAE-.--.--PCAAICAARRLLLGLGTTLSYSALLTKTNRIYRIFEQG--KRSVTPPPFISPTSQLVITFGLTSLQ..VVGVIAWLGAQPPHSVIDYEEQRTVDP----E......QARGVLKCDMSD-.LSLIGCLGYSLLLMVTCTVYAIKARGVP-ETFNEAKPIGFTM---YTTCIIWLAFVPIFFGTAQSAE.KIYIQTTTLTVSLSLSASVSLGMLYVPKTYVILFHPEQN
MGR2_HUMAN/571-824 PVTIACLG.-ALATLFVLGVFVRHNATPVVKASGRELCYILLGGVFLCYCMTFIFIAK-.--.--PSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGA--REGAQRPRFISPASQVAICLALISGQ..LLIVVAWLVVEAPGTGKETAPERREV------......---VTLRCNHRD-.ASMLGSLAYNVLLIALCTLYAFNTRKCP-ENFNEAKFIGFTM---YTTCIIWLALLPIFYVTSS---.DYRVQTTTMCVSVSLSGSVVLGCLFAPKLHIILFQPQKN
MGR_DROME/630-881 PMAIAIFG.-IALTSIVIVLFAKNHDTPLVRASGRELSYTLLFGILVCYCNTFALIAK-.--.--PTIGSCVLQRFGIGVGFSIIYSALLTKTNRISRIFHSA--SKSAQRLKYISPQSQVVITTSLIAIQ..VLITMIWMVVEPPGT-RFYYPDRRE-------......---VILKCKIQD-.MSFLFSQLYNMILITICTIYAIKTRKIP-ENFNESKFIGFTM---YTTCIIWLAFVPIYFGTGN---.SYEVQTTTLCISISLSASVALVCLYSPKVYILVFHPDKN
MGR1_CAEEL/685-934 PTILAVFG.-IIATLFVIVVYVIYNETPVVKASGRELSYILLISMIMCYCMTFVLLSK-.--.--PSAIVCAIKRTGIGFAFSCLYSAMFVKTNRIFRIFS----TRSAQRPRFISPISQVVMTAMLAGVQ..LIGSLIWLSVVPPGW-RHHYPTRDQ-------......---VVLTCNVPD-.HHFLYSLAYDGFLIVLCTTYAVKTRKVP-ENFNETKFIGFSM---YTTCVVWLSWIFFFFGTGS---.DFQIQTSSLCISISMSANVALACIFSPKLWIILFEKHKN
Q20073_CAEEL/1028-1271 LALITVL-.--VVVAIAVLVLVLVKLYLRVVKGNQSLGISLLIGIIILYSTAFFFVFD-.--.--PTDSVCRLRVILHGLGYTICFGVMIAKATQLRNAET----LGFG-TAIHISFWNYWLLLFFIVGVQ..IALSISWFLEPFMSTIGVIDTNVQR-------......-----MMCTMGK-.VEFVVSNFYVMILIFMALFISMLNRNIK-RNYKETKWLLYST---VLCFFTWVAWITLYLVLDH---.--EFRDTVIVVELVACATILLGFLFGPKIYILLSYEPVV
GPC5B_HUMAN/59-302 VEAVAGAGaLITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQ-.--.--EDETICSVRRFLWGVLFALCFSCLLSQAWRVRRLVR----HGTG-----PAGWQLVGLALCLMLVQ..VIIAVEWLVLTVLRD----TRP----------......------ACAYEP-.MDFVMALIYDMVLLVVTLGLALFTLCGKFKRWKLNGAFLLIT--AFLSVLIWVAWMTMYLFGNVKLQqGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLLPALQE
O96954_GEOCY/141-418 YVALAVGG.-LVFAIVCVFFTVIFRKRKLIRLSSPNLNYLIGLGAIILYFNVITLVIP-.TTdTVIAAILCNINPWLTSLGYSLCYGTILAKTIRIWFIFNKPRVPSVT-KSIVIKDYALALFVVSLVVID..VIILGIFAIVEGLRGELAVHRTSNKENIEDTIgptcefHQYYLYICKSKGQvALFTVLFGYKGLLQVTALILAFNTRKVKVKGLDDSKYIAAAIY--VTSIVLAVAAISTYTLRDYVN-.---IYPAVVGIGFLLGTTMILGLVFVPRMVGLYQDPQGD
GABR2_RAT/484-753 LSALTILG.-MIMASAFLFFNIKNRNQKLIKMSSPYMNNLIILGGMLSYASIFLFGLDGsFVsEKTFETLCTVRTWILTVGYTTAFGAMFAKTWRVHAIFKNVKMKK-----KIIKDQKLLVIVGGMLLID..LCILICWQAVDPLRRTVERYSMEPDPAGRDIS......IRPLLEHCENTHMtIWLGIVYAYKGLLMLFGCFLAWETRNVSIPALNDSKYIGMSVYNVGIMCIIGAAVSFLTRDQPN---.---VQFCIVALVIIFCSTITLCLVFVPKLITLRTNPDAA
GABR1_HUMAN/595-867 VSVLSSLG.-IVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGyHIgRNQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEW--RKTLEPWKLYATVGLLVGMD..VLTLAIWQIVDPLHRTIETFAKEEPKEDIDVS......ILPQLEHCSSRKMnTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQD---.---AAFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQ