#AC.SeqVer. EntryVer. Ver.Date Taxid Description JX453331.1 2 20130912 1241371 Abalone herpesvirus Victoria/AUS/2009 EU350361.2 2 20081229 491893 Abalone shriveling syndrome-associated virus AF033812.1 4 20050415 11788 Abelson murine leukemia virus FN434438.1 2 20150307 665102 Abutilon Brazil virus DNA segment A FN434439.1 2 20150307 665102 Abutilon Brazil virus DNA segment B X15983.2 15 20150307 10815 Abutilon mosaic virus subgenome DNA A X15984.3 4 20150307 10815 Abutilon mosaic virus subgenome DNA B JF801956.1 1 20111024 554168 Acanthamoeba castellanii mamavirus strain Hal-V AY653733.1 8 20081127 212035 Acanthamoeba polyphaga mimivirus EF101928.1 3 20071016 322019 Acanthocystis turfacea Chlorella virus 1 JQ837277.2 3 20130128 1168547 Acartia tonsa copepod circovirus isolate 154_D11 KC543331.1 2 20130421 1291515 Acheta domesticus volvovirus isolate IAF JX051319.1 2 20130123 1261100 Achimota virus 1 JX051320.1 2 20130123 1261101 Achimota virus 2 AB051848.1 3 20081201 101764 Aconitum latent virus JN427015.1 3 20120405 1112770 Actinidia virus B isolate TP7-93B AF150629.1 4 20001212 92444 Acute bee paralysis virus DQ286292.1 6 20090531 359302 Rosy apple aphid virus JN935380.1 1 20121101 31612 Adelaide River virus isolate DPP61 KP033140.2 3 20150403 1590650 Adelie penguin polyomavirus isolate AdPyV_Crozier_2012 AF028705.1 3 20050415 68742 Adeno-associated virus 3B AF063497.1 2 20050415 85106 Adeno-associated virus - 1 AF043303.1 4 20100522 10804 Adeno-associated virus - 2, revised sequence J01901.1 5 20050417 10804 Adeno-associated virus - 2 U48704.1 4 20050417 46350 Adeno-associated virus - 3 U89790.1 3 20050418 57579 Adeno-associated virus - 4 AF028704.1 3 20050415 68558 Adeno-associated virus - 6 DQ335246.2 3 20061121 296148 Adeno-associated virus-Go.1 AY388617.1 1 20040527 256548 Bovine adeno-associated virus HF679131.1 3 20150227 1293540 Adoxophyes honmai entomopoxvirus 'L' AP006270.1 3 20050416 224399 Adoxophyes honmai nucleopolyhedrovirus AF547984.1 3 20050415 170617 Adoxophyes orana granulovirus EU591746.1 1 20081026 542343 Adoxophyes orana nucleopolyhedrovirus AB488408.1 2 20140724 390845 Aedes flavivirus KP100644.1 1 20150211 1609159 African bat icavirus A isolate TNo13 HE616777.1 1 20120305 1124179 African cassava mosaic Burkina Faso virus DNA-A, isolate BF:Oua:BF127:08 J02057.1 4 20140515 10817 African cassava mosaic virus DNA 1 J02058.1 4 20140515 10817 African cassava mosaic virus DNA 2 FJ751234.1 2 20120829 685973 African cassava mosaic virus-cotton clone ACMV-Lob1 AF112352.1 5 20050415 222064 African cassava mosaic virus-[Cameroon] component A AF112353.1 4 20040619 222064 African cassava mosaic virus-[Cameroon] component B KF147833.1 2 20131128 1399914 African elephant polyomavirus 1 K02562.2 11 20130821 12480 African green monkey polyomavirus M30540.1 4 20050417 10574 Monkey B-lymphotropic papovavirus KP026921.1 1 20150206 1608275 African pouched rat arterivirus isolate p5 U18466.2 8 20141030 10497 African swine fever virus AM712239.1 2 20080220 443876 African swine fever virus Benin 97/1 FN557520.1 1 20100319 686262 African swine fever virus E75 AM712240.1 2 20080220 443878 African swine fever virus OURT 88/3 (avirulent field isolate) AJ437618.1 2 20050415 188333 Ageratum enation virus FN543100.1 1 20091118 666636 Ageratum enation virus associated DNA 1 FR717140.1 2 20120216 912035 Ageratum leaf curl Buea betasatellite, isolate SatB33 FR717143.1 2 20120216 743035 Ageratum leaf curl Cameroon alphasatellite, isolate SatA7 FR717138.1 2 20120216 635076 Ageratum leaf curl Cameroon betasatellite, isolate SatB6 FR717139.1 2 20120216 635076 Ageratum leaf curl Cameroon betasatellite, isolate SatB14 FR717141.1 2 20120216 635076 Ageratum leaf curl Cameroon betasatellite, isolate SatB35 FR717144.1 2 20120216 912033 Ageratum leaf curl Cameroon virus AJ851005.1 2 20061115 298650 Ageratum leaf curl virus - [G52] FJ869909.1 1 20090429 185750 Ageratum yellow vein betasatellite AB306522.1 2 20100907 446569 Ageratum yellow vein virus satellite DNA beta-[Ishigaki] JQ804985.1 1 20120717 202567 Ageratum yellow vein China virus isolate NN-1 AJ849916.1 2 20070321 298133 Ageratum yellow vein China virus - [G68] JX911332.1 1 20130407 1311625 Ageratum yellow vein China virus - [Z1] JX972141.1 2 20130814 1329380 Ageratum Yellow vein China virus - OX1 FJ956707.1 2 20101107 915293 Ageratum yellow vein Singapore alphasatellite AF314144.1 8 20050415 222079 Ageratum yellow vein Sri Lanka virus segment A EF458639.1 1 20080115 44560 Ageratum yellow vein virus AM940137.1 1 20080205 501251 Ageratum yellow vein virus - [G129] AB306314.1 2 20100907 446318 Ageratum yellow vein virus-Ishigaki AY623626.1 3 20050122 41763 Agropyron mosaic virus strain ND40 EU839994.1 1 20081008 208013 Agrotis ipsilon multiple nucleopolyhedrovirus AY522332.4 9 20090708 10464 Agrotis segetum granulovirus DQ123841.1 1 20060306 31508 Agrotis segetum nucleopolyhedrovirus KM102981.1 1 20141216 1580580 Agrotis segetum nucleopolyhedrovirus B isolate English AB040749.1 4 20050414 72149 Aichivirus A AB010145.1 7 20081203 72149 Aichivirus A, isolate A846/88 KC161964.1 2 20130505 1300945 Canine kobuvirus 1 strain UK003 JQ911763.1 3 20140515 1281440 Canine kobuvirus CH-1 JN088541.1 2 20120205 1082189 Canine kobuvirus US-PC0082 KF831027.1 3 20140522 1379496 Feline kobuvirus strain FK-13 JQ898342.1 2 20121024 1224522 Kobuvirus sewage Kathmandu isolate KoV-SewKTM JQ692069.1 1 20120528 1156769 Porcine kobuvirus strain WUH1 JN630514.1 3 20120316 1136133 Porcine kobuvirus SH-W-CHN/2010/China GQ249161.1 3 20100407 703582 Porcine kobuvirus swine/K-30-HUN/2008/HUN AB000851.1 4 20030707 70566 Akabane virus segement S AB190458.1 1 20070501 70566 Akabane virus segment L AB100604.1 3 20080621 70566 Akabane virus segment M AF005370.1 4 20061114 35252 Alcelaphine herpesvirus 1 KF274499.1 2 20140725 138184 Alcelaphine herpesvirus 2 isolate topi-AlHV-2 KP205452.1 1 20150427 998864 Alfalfa dwarf virus isolate Manfredi L00163.1 4 20060803 12321 Alfalfa mosaic virus RNA 1 X01572.1 6 19970217 12321 Alfalfa mosaic virus RNA-2 K02703.1 2 20060803 12321 Alfalfa mosaic virus RNA-3 EU410442.1 1 20080521 515575 Algerian watermelon mosaic virus FJ670570.2 5 20111115 317027 Allium virus X AY012687.1 2 20011211 144752 Allpahuayo virus segement S AY216502.2 2 20080110 144752 Allpahuayo virus segment L KJ399977.1 1 20140511 318843 Almpiwar virus isolate MRM4059 D13096.1 10 20071221 11153 Canine coronavirus DQ848678.1 1 20060914 12663 Feline coronavirus strain FCoV C1Je FJ938051.1 1 20090713 502100 Feline coronavirus RM FJ938060.1 1 20090713 502101 Feline coronavirus UU2 FJ938061.1 1 20090713 454951 Feline coronavirus UU3 FJ938054.1 1 20090713 454952 Feline coronavirus UU4 FJ938056.1 1 20090713 454953 Feline coronavirus UU5 FJ938053.1 1 20090713 454955 Feline coronavirus UU7 FJ938055.1 1 20090713 627435 Feline coronavirus UU8 FJ938062.1 1 20090713 627436 Feline coronavirus UU9 FJ938059.1 1 20090713 627431 Feline coronavirus UU10 FJ938052.1 1 20090713 627432 Feline coronavirus UU11 FJ938057.1 1 20090713 627433 Feline coronavirus UU15 FJ938058.1 2 20110501 627434 Feline coronavirus UU16 HQ392470.1 1 20101018 906884 Feline coronavirus UU19 HQ392471.1 1 20101018 906885 Feline coronavirus UU20 GU553361.1 1 20100210 711465 Feline coronavirus UU22 GU553362.1 1 20100210 711466 Feline coronavirus UU23 HQ392472.1 1 20101018 906886 Feline coronavirus UU30 HQ392469.1 2 20140928 906887 Feline coronavirus UU40 JN183882.1 2 20140928 1052157 Feline coronavirus UU47 JN183883.1 2 20140928 1052158 Feline coronavirus UU54 AY994055.1 4 20081216 11135 Feline infectious peritonitis virus DQ811787.1 4 20090505 398815 PRCV ISU-1 AJ271965.2 6 20050415 11149 Transmissible gastroenteritis virus strain Purdue HM245925.1 2 20110527 766791 Mink coronavirus strain WD1127 HM245926.1 2 20110527 766792 Mink coronavirus strain WD1133 HM746600.1 1 20110621 1041929 Cavally virus isolate C79 KC807177.1 3 20140604 1332246 Houston virus strain 16740 KF771866.1 2 20140501 325676 Nam Dinh virus isolate NDiV-NJ8-09 JQ686833.1 3 20141015 1265748 Ngewotan virus X74475.1 10 20050418 333763 Human papillomavirus type 32 M73236.1 4 20050417 10590 Human papillomavirus type 42 X74462.1 5 20050418 10614 Human papillomavirus type 3 X74465.1 12 20050418 333759 Human papillomavirus type 10 U31783.1 3 20050417 37111 Human papillomavirus type 28 U31784.1 3 20050417 37112 Human papillomavirus type 29 AJ620211.1 2 20050415 260717 Human papillomavirus type 94 GQ246950.1 2 20100220 720708 Human papillomavirus type 117 FN547152.2 6 20130531 673323 Human papillomavirus type 125 KC138720.1 4 20140102 1288116 Human Papillomavirus type XS2 U31793.1 3 20050417 37116 Human papillomavirus type 61 AY395706.1 1 20040909 334210 Human papillomavirus type 62 KJ145795.1 1 20140604 1484958 Human papillomavirus type 72b AJ620209.1 2 20050415 333771 Human papillomavirus type 81 AF151983.1 3 20050415 333772 Human papillomavirus type 83 AF293960.1 2 20050415 150546 Human papillomavirus type 84 AF349909.1 2 20050415 171370 Human papillomavirus type 86 AJ400628.2 8 20050415 120381 Human papillomavirus type 87 DQ080083.1 2 20051208 338327 Human papillomavirus type 102 GQ244463.1 1 20100305 735496 Human papillomavirus type 114 EF117891.1 2 20071016 333751 Human papillomavirus type 2 X55964.1 6 19920413 10584 Human papillomavirus type 2a X74473.1 13 20050418 333752 Human papillomavirus type 27 AB211993.1 1 20050725 325568 Human papillomavirus type 27b X55965.1 6 20050418 333753 Human papillomavirus type 57 U37537.1 4 20050417 186160 Human papillomavirus type 57b AB361563.1 3 20080621 471358 Human papillomavirus type 57c X74472.1 10 20050418 333762 Human papillomavirus type 26 M62877.1 3 19991101 10595 Human papillomavirus type 51 AB027020.1 3 20050414 37121 Human papillomavirus type 69 AB027021.1 3 20050414 129724 Human papillomavirus type 82 X74474.1 10 20050418 10611 Human papillomavirus type 30 X74482.1 10 20050418 333765 Human papillomavirus type 53 X74483.1 12 20050418 10596 Human papillomavirus type 56 U31794.1 3 20050417 37119 Human papillomavirus type 66 X05015.1 13 20050418 333761 Human papillomavirus type 18 KC470240.1 1 20130908 10588 Human papillomavirus type 39 isolate Qv25959 X74479.1 16 20050418 10593 Human papillomavirus type 45 X77858.1 5 20050418 37115 Human papillomavirus type 59 EU918769.1 2 20090304 45240 Human papillomavirus type 68 DQ080079.1 2 20051208 338322 Human papillomavirus type 68a FR751039.1 1 20101229 940838 Human papillomavirus type 68b U21941.1 8 20050417 39457 Human papillomavirus type 70 DQ080080.1 1 20060531 338324 Human papillomavirus type 97 X74463.1 13 20050418 10620 Human papillomavirus type 7 X74478.1 18 20050418 10615 Human papillomavirus type 40 AJ620205.1 2 20050415 10591 Human papillomavirus type 43 K02718.1 8 20050417 333760 Human papillomavirus type 16 J04353.1 6 20050417 10585 Human papillomavirus type 31 M12732.1 4 20050417 10586 Human papillomavirus type 33 M74117.1 5 20050417 10587 Human papillomavirus type 35 X74481.1 16 20050418 10618 Human papillomavirus type 52 D90400.1 7 20071207 10598 Human papillomavirus type 58 D21208.1 6 20070414 37120 Human papillomavirus type 67 AF020905.1 2 20050415 66261 Common chimpanzee papillomavirus 1 AF092932.1 3 20050415 31552 Human papillomavirus type 6 L41216.1 4 20050417 37122 Human papillomavirus type 6a X00203.1 12 20050418 10600 Human papillomavirus type 6b M14119.1 4 20050417 10580 Human papillomavirus type 11 DQ344807.1 1 20060131 10573 Human papillomavirus type 13 U31788.1 3 20050417 10592 Human papillomavirus type 44 U31791.1 3 20050417 37114 Human papillomavirus type 55 X74476.1 10 20050418 333764 Human papillomavirus type 34 M60184.1 8 20050417 10570 Alphapapillomavirus 12 EF558839.2 3 20091022 471181 Macaca fascicularis papillomavirus type 3 EF558841.1 2 20091022 471182 Macaca fascicularis papillomavirus type 4 EF558843.1 2 20091022 471183 Macaca fascicularis papillomavirus type 5 EF558840.1 2 20091022 471184 Macaca fascicularis papillomavirus type 6 EF558838.1 2 20091022 471185 Macaca fascicularis papillomavirus type 7 EF558842.1 2 20091022 471186 Macaca fascicularis papillomavirus type 8 EU490516.1 2 20091022 524652 Macaca fascicularis papillomavirus type 9 EU490515.1 2 20091022 524653 Macaca fascicularis papillomavirus type 10 GQ227670.1 2 20091022 656889 Macaca fascicularis papillomavirus type 11 EF591300.1 2 20091022 464935 Rhesus papillomavirus type 1b U37488.1 3 20050417 333766 Alphapapillomavirus 13 AB040456.1 3 20050414 120686 Human papillomavirus type 71 AB542808.1 1 20111213 333769 Human papillomavirus type 90 DNA, strain: 590 DQ080082.1 2 20051208 338326 Human papillomavirus type 106 AB206396.1 4 20060531 316983 Alstroemeria virus x AY863024.1 3 20070311 85454 Alternanthera mosaic virus AJ965540.1 3 20060427 337826 Alternanthera yellow vein virus KP239989.1 1 20141228 1580606 Alternaria brassicicola endornavirus isolate 1 KJ817371.1 2 20150410 1532031 Alternaria longipes dsRNA virus 1 strain HN28 AF485256.1 3 20030620 45218 Amapari virus segment S AY216517.2 2 20080110 45218 Amapari virus strain segment L AM749118.1 2 20080326 453139 Cherry chlorotic rusty spot associated small satellite-like dsRNA A AM749119.1 2 20080326 453140 Cherry chlorotic rusty spot associated small satellite-like dsRNA B AM749120.1 2 20080326 453141 Cherry chlorotic rusty spot associated small satellite-like dsRNA C AY150217.1 2 20050416 217733 Ambystoma tigrinum stebbensi virus JX569193.2 5 20140515 1344113 American bat vesiculovirus TFFN-2013 isolate liver2008 JQ245696.1 1 20120503 1177630 American hop latent virus isolate Bittergold AF235165.1 4 20030529 134632 American plum line pattern virus RNA2 AF235166.1 4 20030529 134632 American plum line pattern virus RNA3 AF250284.1 2 20050415 28321 Amsacta moorei entomopoxvirus 'L' JF999965.1 1 20110906 104388 Anatid herpesvirus 1 strain 2085 KJ938716.1 2 20150314 1542745 Ancient caribou feces associated virus JX508291.1 2 20130507 73819 Andean potato latent virus JX508290.1 4 20130613 1296569 Andean potato mild mosaic virus isolate Hu AF291704.5 7 20030529 46607 Andes virus strain Chile-9717869 segment L AF291703.2 4 20030529 46607 Andes virus strain Chile-9717869 segment M AF291702.1 5 20030529 46607 Andes virus strain Chile-9717869 segment S DQ219415.1 2 20070131 352882 Angelonia flower break virus KC469701.1 1 20140131 1420600 Anguilla anguilla circovirus isolate Ba1 FJ940765.3 4 20120523 150286 Anguillid herpesvirus 1 FN557213.1 2 20120517 685443 Eel Virus European X complete genome, viral cRNA, isolate 153311 AP013055.1 2 20140305 62099 Anomala cuprea entomopoxvirus DNA, strain: CV6M KF938901.1 1 20140316 1465751 UNVERIFIED: Anopheles minimus irodovirus isolate AMIV U25749.1 4 20050417 38251 Goose parvovirus KC171936.1 1 20130310 37325 Muscovy duck parvovirus isolate SAAS-SHNH KF751885.1 2 20140323 1460071 Antheraea pernyi iflavirus isolate LnApIV-02 DQ486030.2 3 20061114 161494 Antheraea pernyi nucleopolyhedrovirus JX404026.1 2 20130324 1234615 Philosamia cynthia ricini nucleopolyhedrovirus virus DQ813662.1 2 20061020 31507 Anticarsia gemmatalis nucleopolyhedrovirus JQ320375.1 2 20120330 209529 Aphid lethal paralysis virus HM363516.1 1 20110117 168135 Apium virus Y isolate Ce FJ914221.1 1 20100602 307461 Apocheima cinerarium nucleopolyhedrovirus AF160193.1 2 20050415 64280 Apoi virus M58152.1 4 20061114 12175 Apple chlorotic leaf spot virus KM386645.1 1 20150331 1633752 Apple geminivirus PL-2015 isolate China HE963831.1 3 20130830 1211388 Apple green crinkle associated virus, genomic RNA, isolate Aurora-1 AF174584.1 3 20040619 12319 Apple mosaic virus RNA 1 AF174585.1 3 20040619 12319 Apple mosaic virus RNA 2 AY972082.1 2 20050425 325110 Apple scar skin viroid-C isolate Liaoning D14995.2 7 20080226 28347 Apple stem grooving virus AY646511.1 1 20040614 33759 Citrus tatter leaf virus strain Kumquat 1 D21829.1 10 20030707 35350 Apple stem pitting virus HQ339956.1 2 20110208 75387 Apricot latent virus, isolate A18 AY713379.1 3 20090422 307677 Apricot pseudo-chlorotic leaf spot virus isolate Sus2 HG008921.2 2 20140226 1343920 Apricot vein clearing associated virus, isolate VC KP202150.1 1 20150430 1634476 Apteryx rowi circovirus-like virus isolate JWNM 090913 EU142040.1 2 20071214 471728 Seal picornavirus type 1 D00664.1 5 20071215 190809 Arabis mosaic virus large satellite RNA M21212.1 4 20020606 196399 Arabis mosaic virus small satellite RNA EF614259.1 2 20080719 211977 Aravan virus KC994644.1 2 20140501 1479612 Arboretum virus isolate Lo-121 EU715328.1 2 20101021 556524 Armigeres subalbatus virus SaX06-AK20 KF917535.1 1 20150305 64303 Aroa virus strain Macaray 01809 KF917538.1 1 20150305 64313 Naranjal virus strain 25008 JN620802.1 3 20130129 1133751 Artemisia virus A JQ037754.1 1 20120116 1131485 Artibeus jamaicensis parvovirus 1 KP405232.1 1 20150327 46076 Artichoke latent virus isolate FR37 X62493.1 7 20050418 12142 Artichoke mottled crinkle virus HQ425778.1 2 20130128 1027880 Asclepias asymptomatic virus FJ824737.1 2 20090821 351427 Asian prunus virus 1 KJ830761.1 1 20141204 443746 Asparagus virus 1 isolate DSMZ PV-0955 AB304848.1 1 20080301 445435 Asparagus virus 3 strain J AJ316085.1 4 20021115 445435 Asparagus virus 3 FJ222451.1 1 20081021 568715 Astrovirus MLB1 HM450380.1 2 20100921 858367 Astrovirus MLB1 HK05 JF742759.1 1 20111106 683172 Astrovirus MLB2 isolate MLB2/human/Stl/WD0559/2008 JX857870.1 2 20130117 1247114 Astrovirus MLB3 isolate MLB3/human/Vellore/26564/2004 GQ891990.1 1 20100602 767521 Astrovirus SG FJ973620.1 2 20090927 645687 Astrovirus VA1 JX857868.1 2 20130117 683174 Astrovirus VA3 isolate VA3/human/Vellore/28054/2005 JX857869.1 2 20130117 1247113 Astrovirus VA4 isolate VA4/human/Nepal/s5363 JQ340310.1 3 20120605 1137931 Astrovirus wild boar/WBAstV-1/2011/HUN JX159987.1 7 20140620 1236391 Ateles paniscus polyomavirus 1 AF083424.1 7 20071115 85618 Ateline herpesvirus 3 L39125.1 5 20000304 37961 Atkinsonella hypoxylon virus RNA 1 KJ577139.1 2 20140918 1489836 Atlantic salmon calicivirus isolate Nordland/2011 EF646380.1 1 20080318 381543 Atlantic salmon paramyxovirus DQ174103.1 5 20060302 348296 Atlantic salmon swim bladder sarcoma virus AB193726.1 5 20091004 674971 Aurantiochytrium single-stranded RNA virus 01 AF081020.2 3 20021130 90961 Australian bat lyssavirus L22858.1 15 20050417 46015 Autographa californica nucleopolyhedrovirus AY145471.1 3 20050416 80366 Rachiplusia ou MNPV Y15936.2 11 20121105 1239437 Avastrovirus 1 HM029238.1 1 20110406 336960 Avian nephritis virus 1 from China FJ434664.1 3 20121005 1239439 Avastrovirus 3 C-NGB EU143843.1 2 20121005 1239439 Avastrovirus 3 strain TAstV/AK/98 KF753804.1 2 20140501 1239441 Duck astrovirus strain SL1 AY629582.1 2 20040911 219704 Avian adeno-associated virus ATCC VR-865 JX065209.1 1 20120723 675389 Avian bornavirus isolate 6758 FJ620690.1 1 20090618 555867 Avian bornavirus 2 M14008.1 3 20060803 11958 Avian carcinoma virus strain MH2E21 AY646283.1 2 20060111 284515 Avian infectious bronchitis virus partridge/GD/S14/2003 JF705860.1 1 20110926 300188 Duck coronavirus isolate DK/CH/HN/ZZ2004 LN610099.1 1 20150413 1245464 Guinea fowl coronavirus GfCoV/FR/2011 M95169.1 18 20061114 11120 Infectious bronchitis virus strain Beaudette FN430414.1 1 20091023 658929 Infectious bronchitis virus ITA/90254/2005 FN430415.1 2 20130703 658930 Infectious bronchitis virus NGA/A116E7/2006 EU095850.1 3 20081126 11152 Turkey coronavirus GQ368252.1 2 20110128 341671 Avian adeno-associated virus AY629583.1 2 20040911 281492 Avian adeno-associated virus strain DA-1 AY275539.1 1 20040101 70796 Avian encephalomyelitis virus strain L2Z AJ238124.1 3 20050415 93465 Avian endogenous retrovirus EAV-HP AJ238125.1 3 20050415 93465 Avian endogenous retrovirus EAV-HP(Chicken) HM590588.1 2 20110601 1002273 Avian gyrovirus 2 AY535004.1 2 20040529 172851 Avian hepatitis E virus HQ425636.1 2 20110419 11946 Avian leukemia virus isolate SCDY1 DQ365814.1 1 20070131 11864 Avian leukosis virus strain MQNCSU M37980.1 8 20051224 363745 Avian leukosis virus - RSA KP284572.1 2 20150417 1401444 Avian leukosis virus subgroup J isolate PDRC-59831 AY579780.1 3 20050416 38525 Avian metapneumovirus HG934338.1 1 20140729 227731 Avian metapneumovirus type C strain Muscovy duck/1999/99178/France HG934339.1 1 20140729 519376 Avian metapneumovirus type D strain Turkey/1985/Fr85.1 AF033809.1 4 20050415 11867 Avian myelocytomatosis virus EU338414.1 2 20080904 35302 Avian paramyxovirus 2 EU403085.1 2 20081031 207246 Avian paramyxovirus 3 EU877976.1 1 20080729 28274 Avian paramyxovirus 4 GU206351.1 1 20100310 740710 Avian paramyxovirus 5 AY029299.1 2 20050416 157619 Avian paramyxovirus 6 FJ231524.1 2 20090911 622416 Avian paramyxovirus 7 FJ215864.1 2 20090724 623144 Avian paramyxovirus 8 EU910942.1 2 20090510 580247 Avian paramyxovirus 9 JQ886184.1 1 20120704 1204252 Avian paramyxovirus 11 isolate common_snipe/France/100212/2010 KC333050.1 1 20130324 1305716 Avian paramyxovirus 12 isolate Wigeon/Italy/3920_1/2005 HM147142.1 1 20100719 862945 Avian paramyxovirus penguin/Falkland Islands/324/2007 X13744.1 4 20050418 11874 Avian retrovirus IC10 AY563023.1 2 20071101 686983 Avian sapelovirus KC614703.1 2 20130512 1293536 Turkey avisivirus isolate USA-IN1 KM874290.1 1 20150304 1618232 Avon-Heathcote Estuary associated circular virus 1 isolate AHEaCV-1-NZ-2981C1-2012 KM874294.1 1 20150304 1618243 Avon-Heathcote Estuary associated circular virus 2 isolate AHEaCV-2-NZ-3024C3-2012 KM874295.1 1 20150304 1618254 Avon-Heathcote Estuary associated circular virus 3 isolate AHEaCV-3-NZ-3030C2-2012 KM874299.1 1 20150304 1618255 Avon-Heathcote Estuary associated circular virus 4 isolate AHEaCV-4-NZ-3049C2-2012 KM874303.1 1 20150304 1618256 Avon-Heathcote Estuary associated circular virus 5 isolate AHEaCV-5-NZ-4834GA-2012 KM874308.1 1 20150304 1618257 Avon-Heathcote Estuary associated circular virus 6 isolate AHEaCV-6-NZ-4645GA-2012 KM874309.1 1 20150304 1618258 Avon-Heathcote Estuary associated circular virus 7 isolate AHEaCV-7-NZ-3107C3-2012 KM874312.1 1 20150304 1618259 Avon-Heathcote Estuary associated circular virus 8 isolate AHEaCV-8-NZ-2216TU-2012 KM874315.1 1 20150304 1618260 Avon-Heathcote Estuary associated circular virus 9 isolate AHEaCV-9-NZ-3171C1-2012 KM874321.1 1 20150304 1618233 Avon-Heathcote Estuary associated circular virus 10 isolate AHEaCV-10-NZ-4985GA-2012 KM874326.1 1 20150304 1618234 Avon-Heathcote Estuary associated circular virus 11 isolate AHEaCV-11-NZ-3130SG-2012 KM874328.1 1 20150304 1618235 Avon-Heathcote Estuary associated circular virus 12 isolate AHEaCV-12-NZ-3316C1-2012 KM874331.1 1 20150304 1618236 Avon-Heathcote Estuary associated circular virus 13 isolate AHEaCV-13-NZ-4754GA-2012 KM874332.1 1 20150304 1618237 Avon-Heathcote Estuary associated circular virus 14 isolate AHEaCV-14-NZ-3348C3-2012 KM874338.1 1 20150304 1618238 Avon-Heathcote Estuary associated circular virus 15 isolate AHEaCV-15-NZ-2320TU-2012 KM874340.1 1 20150304 1618239 Avon-Heathcote Estuary associated circular virus 16 isolate AHEaCV-16-NZ-3310C1-2012 KM874345.1 1 20150304 1618240 Avon-Heathcote Estuary associated circular virus 17 isolate AHEaCV-17-NZ-2032CO-2012 KM874344.1 1 20150304 1618241 Avon-Heathcote Estuary associated circular virus 18 isolate AHEaCV-17-NZ-2032GA-2012 KM874347.1 1 20150304 1618242 Avon-Heathcote Estuary associated circular virus 19 isolate AHEaCV-19-NZ-4942GA-2012 KM874348.1 1 20150304 1618244 Avon-Heathcote Estuary associated circular virus 20 isolate AHEaCV-20-NZ-4957GA-2012 KM874350.1 1 20150304 1618245 Avon-Heathcote Estuary associated circular virus 21 isolate AHEaCV-21-NZ-2050TU-2012 KM874352.1 1 20150304 1618246 Avon-Heathcote Estuary associated circular virus 22 isolate AHEaCV-22-NZ-3009SG-2012 KM874353.1 1 20150304 1618247 Avon-Heathcote Estuary associated circular virus 23 isolate AHEaCV-23-NZ-2161TU-2012 KM874354.1 1 20150304 1618248 Avon-Heathcote Estuary associated circular virus 24 isolate AHEaCV-24-NZ-2183TU-2913 KM874356.1 1 20150304 1618249 Avon-Heathcote Estuary associated circular virus 25 isolate AHEaCV-25-NZ-2250TU-2012 KM874359.1 1 20150304 1618250 Avon-Heathcote Estuary associated circular virus 26 isolate AHEaCV-26-NZ-2311TU-2012 KM874360.1 1 20150304 1618251 Avon-Heathcote Estuary associated circular virus 27 isolate AHEaCV-27-NZ-2332TU-2012 KM874365.1 1 20150304 1618252 Avon-Heathcote Estuary associated circular virus 28 isolate AHEaCV-28-NZ-2208TU-2012 KM874366.1 1 20150304 1618253 Avon-Heathcote Estuary associated circular virus 29 isolate AHEaCV-29-NZ-3425C1-2012 KJ437671.1 2 20141105 1476487 Axonopus compressus streak virus isolate ACSV_NG_g84_oba_2007 KM408491.1 1 20150122 1594788 Pestivirus Burdur/05-TR JX428945.1 1 20121001 1234809 Pestivirus strain Aydin/04-TR D10032.1 12 20081001 11764 Baboon endogenous virus strain M7 KF133809.1 1 20130806 1379694 Bacillariodnavirus LDMD-2013 KP263543.1 1 20150405 1634484 Badger feces-associated gemycircularvirus strain 588t EU684972.1 2 20091023 64290 Bagaza virus KC734549.1 4 20140515 64291 Israel turkey meningoencephalomyelitis virus KJ541759.1 1 20140821 1535248 Ball python nidovirus strain 07-53 D26017.1 5 20080531 35286 Bamboo mosaic virus JQ898331.2 3 20121024 1229324 Baminivirus isolate BamiV DQ851496.1 2 20080306 45661 Banana bract mosaic virus L41574.1 4 20000304 12585 Banana bunchy top virus DNA 3 AF314662.1 2 20010924 148879 Banana mild mosaic virus HQ593111.1 1 20110504 1016852 Banana streak CA virus KJ013507.1 3 20141115 328670 Banana streak GF virus HQ593112.1 1 20110504 1016853 Banana streak IM virus HQ659760.1 2 20110406 1016853 Banana streak IM virus strain IRFA910 AY805074.1 3 20050416 1476909 Banana streak MY virus KJ013509.1 3 20141115 1476909 Banana streak MY virus AJ002234.1 4 20050526 328671 Banana streak OL virus HQ593107.1 1 20110504 1016854 Banana streak UA virus HQ593108.1 1 20110504 1016855 Banana streak UI virus HQ593109.1 1 20110504 1016856 Banana streak UL virus HQ593110.1 1 20110504 1016857 Banana streak UM virus DQ451009.1 1 20060419 69577 Banana streak virus isolate GD DQ092436.1 1 20050712 334778 Banana streak virus Acuminata Yunnan KJ013510.1 3 20141115 1411991 Banana streak VN virus EU069819.1 1 20071201 479058 Bandicoot papillomatosis carcinomatosis virus type 1 EU277647.1 1 20080604 500654 Bandicoot papillomatosis carcinomatosis virus type 2 GU799606.1 2 20110726 759938 Barbel circovirus Y10973.1 2 20050418 12466 Barley mild mosaic virus RNA1 X90904.1 4 19961213 12466 Barley mild mosaic virus RNA2 J04342.1 2 20000304 12327 Barley stripe mosaic virus RNA 1 X03854.1 6 20081023 12327 Barley stripe mosaic virus RNA 2 M16576.1 5 20000304 12327 Barley stripe mosaic virus RNA 3 KC571999.1 2 20130707 1304863 Barley yellow dwarf virus Ker-II isolate K439 AY220739.1 1 20030327 224578 Barley yellow dwarf virus-GAV AF218798.2 2 20030422 228581 Barley yellow dwarf virus-PAS AJ810418.1 4 20090730 12040 Barley yellow dwarf virus-PAV AJ132268.1 5 20030128 12465 Barley yellow mosaic virus KM213865.1 1 20150305 656083 Barley yellow striate mosaic virus strain Hebei U73745.1 4 20070714 11020 Barmah Forest virus DQ821938.1 1 20070701 373398 Basella rugose mosaic virus isolate AC DQ851494.1 2 20080306 400395 Peace lily mosaic virus isolate Haiphong JQ805139.1 2 20120722 1195167 Bat betaherpesvirus B7D8 JX863737.1 1 20130512 1329650 Bat circovirus isolate XOR KM382269.1 2 20150227 1572237 Bat circovirus POA/2012/II KM382270.1 2 20150227 1572239 Bat circovirus POA/2012/VI JF938082.1 2 20111020 1072162 Bat circovirus ZS/China/2011 isolate YN-BtCV-5 EU420138.1 2 20080422 393767 Bat coronavirus 1A EU420137.1 2 20080422 393768 Bat coronavirus 1B DQ648794.1 1 20060720 389230 Bat coronavirus (BtCoV/133/2005) GU190215.1 2 20101010 864596 Bat coronavirus BM48-31/BGR/2008 KF430219.1 2 20140928 1384461 Bat coronavirus CDPHE15/USA/2006 JQ989272.1 1 20121019 1241932 Hipposideros bat coronavirus HKU10 isolate TLC1343A JQ989270.1 1 20121019 1241933 Rousettus bat coronavirus HKU10 isolate 183A JQ303225.1 3 20140702 1147756 Rhinolophus ferrumequinum retrovirus JX941466.1 3 20130407 1303386 Bat hepatitis virus isolate 776 JQ001749.1 2 20120814 1216472 Bat hepevirus isolate BatHEV/BS7/GE/2009 KF636752.1 1 20141001 1541205 Bat Hp-betacoronavirus/Zhejiang2013 GU226970.1 1 20100308 727977 Bat adenovirus TJM JN252129.1 3 20120205 696069 Bat adenovirus 2 strain PPV1 HQ660129.1 2 20120510 1112631 Bat Paramyxovirus Eid_hel/GH-M74a/GHA/2009 HQ595340.1 1 20110816 1074863 Bat picornavirus 1 strain NC16A HQ595343.1 1 20110816 1074864 Bat picornavirus 2 strain SK17F HQ595345.1 1 20110816 1074865 Bat picornavirus 3 strain TLC21F KJ641707.1 1 20150402 1221637 Bat polyomavirus isolate BtMp-PyV/SX2013 FJ188392.1 2 20090722 563775 Myotis polyomavirus VM-2008 AB972945.1 1 20150314 1623687 Bat polyomavirus 5a DNA isolate: 5a AB972940.1 1 20150314 1623684 Bat polyomavirus 5b DNA isolate: 5b-2 AB972941.1 1 20150314 1623685 Bat polyomavirus 6a DNA isolate: 6a AB972947.1 1 20150314 1623689 Bat polyomavirus 6b DNA isolate: 6b AB972946.1 1 20150314 1623688 Bat polyomavirus 6c DNA isolate: 6c AB972942.1 1 20150314 1623686 Bat polyomavirus 6d DNA isolate: 6d-2 JN899075.1 1 20120514 1185359 Bat sapovirus TLC58/HK HM004432.1 1 20101130 880159 Bathycoccus sp. RCC1105 virus BpV1 HM004430.1 1 20101130 880160 Bathycoccus sp. RCC1105 virus BpV2 KJ469370.1 1 20150305 64306 Batu Cave virus strain P70-1459 AF080560.1 3 20061114 77856 Beak and feather disease virus AF110189.1 4 20050415 31602 Bean calico mosaic virus DNA A AF110190.1 2 20001018 31602 Bean calico mosaic virus DNA B HQ229995.1 2 20110406 43240 Bean common mosaic necrosis virus strain TN1 DQ666332.1 1 20070801 12196 Bean common mosaic virus strain NL4 AY575773.1 2 20040419 29276 Bean common mosaic virus strain Blackeye U05771.1 6 20050417 28353 Bean common mosaic virus strain peanut stripe M88180.1 8 20081021 10838 Bean dwarf mosaic virus DNA B AF173555.1 4 20050415 222447 Bean golden yellow mosaic virus-[Mexico] DNA-A AF173556.1 3 20040619 222447 Bean golden yellow mosaic virus-[Mexico] DNA-B D00200.1 5 20070710 222449 Bean golden yellow mosaic virus-[Puerto Rico-Japan] DNA A D00201.1 8 20070710 222449 Bean golden yellow mosaic virus-[Puerto Rico-Japan] DNA B AF441393.1 3 20060111 12041 Bean leafroll virus M62738.1 2 20000304 12260 Bean pod mottle virus RNA 2 Y11023.2 6 20130404 57119 Bean yellow dwarf virus D83749.1 5 20050417 12197 Bean yellow mosaic virus AY924390.1 2 20071107 192848 Bear Canyon virus segment L AY924391.1 2 20071107 192848 Bear Canyon virus segment S HE572591.1 3 20121121 1054649 Beauveria bassiana RNA virus 1 HM147985.1 1 20120227 59305 Bebaru virus AY626780.1 2 20060914 196375 Beet black scorch virus FN543474.1 1 20091120 298965 Beet black scorch virus satellite RNA AF352024.1 4 20060111 131082 Beet chlorosis virus JQ707944.1 3 20130129 391228 Beet curly top Iran virus isolate IR:Neg:B25P:Sug:08 EU273818.1 3 20080507 501371 Beet curly top Iran virus-[K] EU273817.1 3 20080507 501372 Beet curly top Iran virus-[Sh2] JX082259.1 1 20130110 1277443 Beet curly top Iran virus-[Siv] EU273816.1 3 20080507 501373 Beet curly top Iran virus-[Yazd] JX487184.1 2 20140501 10840 Beet curly top virus isolate California-BV3 FJ545686.1 3 20140501 10840 Beet curly top virus isolate LRME27607 JN817383.1 4 20140515 10840 Beet curly top virus isolate pCO-95-6-31 AY548948.1 2 20140430 10840 Beet curly top virus isolate spinach 3 EU193175.1 2 20140501 10840 Beet curly top virus strain BMCTV-Mexico AF379637.1 4 20050415 268961 Beet curly top virus - California [Logan/Arabidopsis] U56975.1 6 20050417 268956 Beet mild curly top virus - [Worland] X83110.1 4 20050418 156690 Beet mild yellowing virus AY206394.2 3 20040602 114921 Beet mosaic virus isolate BtMV-Wa X05147.1 4 19980418 31721 Beet necrotic yellow vein virus RNA-1 D84411.1 9 20060609 31721 Beet necrotic yellow vein virus RNA-2 D84412.1 6 20030707 31721 Beet necrotic yellow vein virus RNA-3 D84413.1 6 20030707 31721 Beet necrotic yellow vein virus RNA-4 D63936.1 5 20030707 31721 Beet necrotic yellow vein virus RNA-5 AF061869.1 2 20020214 76343 Beet soil-borne mosaic virus RNA-2 FN386612.1 3 20150307 46436 Beet soil-borne virus segment RNA-1 FN386613.1 3 20150307 46436 Beet soil-borne virus segment RNA-2 FN386614.1 3 20150307 46436 Beet soil-borne virus segment RNA-3 AJ223596.1 2 20061130 71972 Beet virus Q RNA 1 EU636990.1 2 20110928 12042 Beet western yellows virus AF473561.1 1 20020509 12042 Beet western yellows virus strain USA X73476.1 11 20061114 12161 Beet yellows virus DQ100461.1 1 20060227 341053 Beilong virus AB597230.1 1 20110707 354328 Bell pepper endornavirus genomic RNA, host: Capsicum annuum cv. Kyosuzu DQ355023.1 2 20120404 368735 Bell pepper mottle virus EU111742.1 2 20080501 694015 Beluga Whale coronavirus SW1 KF793824.1 2 20140312 1433215 Bottlenose dolphin coronavirus HKU22 isolate CF090325 HM461974.1 1 20120617 318834 Berrimah virus strain DPP 63 AF220295.1 3 20050415 11128 Bovine coronavirus strain Quebec EF424615.1 3 20070615 422217 Bovine coronavirus E-AH65 EF424616.1 3 20070615 422218 Bovine coronavirus E-AH65-TC EF424619.1 3 20070615 422220 Bovine coronavirus E-AH187 FJ938064.1 1 20090713 454963 Bovine coronavirus E-AH187-TC FJ938063.1 1 20090713 422216 Bovine coronavirus E-DB2-TC DQ915164.2 3 20070621 404135 Bovine coronavirus isolate Alpaca EF424617.1 3 20070615 422214 Bovine coronavirus R-AH65 EF424618.1 3 20070615 422215 Bovine coronavirus R-AH65-TC EF424620.1 3 20070615 422219 Bovine coronavirus R-AH187 EF424624.1 3 20070615 422140 Calf-giraffe coronavirus US/OH3/2006 JX860640.1 2 20130313 215681 Canine respiratory coronavirus strain K37 KF906249.1 1 20140403 1479610 Dromedary camel coronavirus HKU23 strain HKU23-265F EF446615.1 1 20071115 136187 Equine coronavirus strain NC99 EF424622.1 3 20070615 422141 Giraffe coronavirus US/OH3-TC/2006 EF424623.1 3 20070615 422139 Giraffe coronavirus US/OH3/2003 AY585229.1 2 20060111 31631 Human coronavirus OC43 serotype OC43-Paris FJ415324.1 1 20081216 166124 Human enteric coronavirus 4408 DQ011855.1 3 20060701 42005 Porcine hemagglutinating encephalomyelitis virus strain VW572 EF424621.1 2 20070510 422138 Sable antelope coronavirus US/OH1/2003 FJ425188.1 1 20081216 422133 Sambar deer coronavirus US/OH-WD388-TC/1994 FJ425189.1 1 20081216 422132 Sambar deer coronavirus US/OH-WD388/1994 FJ425185.1 1 20081216 502096 Waterbuck coronavirus US/OH-WD358-GnC/1994 FJ425184.1 1 20081216 422137 Waterbuck coronavirus US/OH-WD358-TC/1994 FJ425186.1 1 20081216 422135 Waterbuck coronavirus US/OH-WD358/1994 FJ425187.1 1 20081216 422134 White-tailed deer coronavirus US/OH-WD470/1994 KC545383.1 2 20140312 1385427 Betacoronavirus Erinaceus/VMC/DEU/2012 isolate ErinaceusCoV/2012-174/GER/2012 KM349742.1 2 20150417 1590370 Betacoronavirus HKU24 strain HKU24-R05005I M17463.1 5 20050417 333923 Human papillomavirus type 5 D90252.1 6 20071207 10599 Human papillomavirus type 5b M12737.1 3 20000304 10579 Human papillomavirus type 8 X74466.1 10 20050418 10604 Human papillomavirus type 12 X74467.1 14 20050418 31546 Human papillomavirus type 14D X74470.1 12 20050418 10608 Human papillomavirus type 19 U31778.1 3 20050417 31547 Human papillomavirus type 20 U31779.1 3 20050417 31548 Human papillomavirus type 21 U31782.1 3 20050417 37956 Human papillomavirus type 24 X74471.1 10 20050418 10609 Human papillomavirus type 25 U31785.1 3 20050417 37957 Human papillomavirus type 36 M32305.1 5 20061114 10594 Human papillomavirus type 47 FM955837.2 3 20091027 587347 Human papillomavirus type 98 FM955838.1 2 20090722 587348 Human papillomavirus type 99 FM955841.1 2 20090722 587350 Human papillomavirus type 105 GQ246951.1 2 20101119 927771 Human papillomavirus type 118 clone K2 GQ845446.1 1 20100527 765056 Human papillomavirus type 124 JF304768.1 1 20140210 990302 Human papillomavirus type 152 isolate Muc17.1 EF028290.1 2 20090319 419544 Macaca fascicularis papillomavirus type 1 EU410347.1 2 20080926 563190 Human papillomavirus FA75/KI88-03 X74464.1 12 20050418 10621 Human papillomavirus type 9 X74468.1 11 20050418 10606 Human papillomavirus type 15 X74469.1 10 20050418 10607 Human papillomavirus type 17 U31780.1 3 20050417 37954 Human papillomavirus type 22 U31781.1 3 20050417 37955 Human papillomavirus type 23 U31786.1 3 20050417 37958 Human papillomavirus type 37 U31787.1 3 20050417 37959 Human papillomavirus type 38 DQ090005.2 3 20061004 334514 Human papillomavirus type 38b subtype FA125 FM955839.1 2 20090722 587349 Human papillomavirus type 100 FM955840.1 2 20090722 518628 Human papillomavirus type 104 EF422221.1 2 20080920 427343 Human papillomavirus type 107 EU410348.1 1 20080924 518629 Human papillomavirus type 110 EU410349.1 1 20080924 518630 Human papillomavirus type 111 FM955842.1 2 20090722 587351 Human papillomavirus type 113 FN598907.1 3 20120718 765052 Human papillomavirus type 120, isolate SIBX-3a GQ845442.1 1 20100527 765052 Human papillomavirus type 120 GQ845444.1 1 20100527 765054 Human papillomavirus type 122 FN677756.1 8 20130611 743812 Human papillomavirus type 151 HE963025.1 3 20130611 1209820 Human papillomavirus type 159 isolate SIBX8 X74480.1 16 20050418 10616 Human papillomavirus type 49 FJ947080.1 2 20091209 696746 Human papillomavirus type 115 FN677755.1 9 20130611 743811 Human papillomavirus type 150 AJ308425.1 4 20030212 186371 Bhendi yellow vein betasatellite KC222955.1 1 20130204 186371 Bhendi yellow vein betasatellite isolate Hyderabad FJ589571.1 1 20090203 591160 Bhendi yellow vein Bhubhaneswar virus KJ628309.1 1 20140923 1504801 Bhendi yellow vein Haryana virus isolate OY82 FR823510.1 2 20141125 908070 Bhendi yellow vein mosaic betasatellite, isolate Himachal JX678967.1 2 20130128 120168 Bhendi yellow vein mosaic virus isolate WTHOK6 AF241479.1 7 20050415 221523 Bhendi yellow vein mosaic virus-[Madurai] KF649336.1 2 20140922 320856 Bidens mosaic virus isolate SP01 EU250212.1 1 20091231 433357 Bidens mottle virus KP688373.1 2 20150211 909207 Bivens Arm virus isolate UF 10 M23122.1 7 20050417 10629 BK polyomavirus V01108.1 6 20050418 10629 BK polyomavirus, strain Dunlop X02396.1 5 20050418 12285 Black beetle virus RNA-1 X00956.1 3 19930912 12285 Black beetle virus RNA-2 KP233189.1 1 20150131 1603066 Black howler monkey smacovirus isolate SF1 KP119603.1 1 20141218 92395 Black queen cell virus isolate JL1 EU082131.1 2 20080221 463392 Black raspberry virus F KP071318.1 3 20150227 1572341 Black sea bass polyomavirus 1 isolate 2835 KC904540.1 4 20140515 1381464 Blackberry vein banding associated virus isolate Mississippi1 JN053266.1 2 20110914 1043184 Blackberry virus E isolate BB_Ellis-1 AY994084.1 3 20080213 323118 Blackberry virus Y AF368272.1 2 20030529 65743 Blackcurrant reversion virus segment RNA-1 AF020051.3 6 20040619 65743 Blackcurrant reversion virus segment RNA-2 AF192260.1 3 20050415 97344 Periplaneta fuliginosa densovirus JQ807999.1 1 20121104 1072517 Blue squill virus A isolate SW3 HM029246.1 1 20101010 430710 Blueberry latent virus isolate MI-1 AF404509.2 4 20050415 172220 Blueberry red ringspot virus AY941198.1 4 20051208 31722 Blueberry scorch virus isolate BC-1 AB733585.1 2 20130402 1206566 Blueberry virus A JX134222.1 2 20140227 1223302 Bluegill picornavirus isolate 04-032 AM498051.2 5 20150307 197780 Bluetongue virus 8 complete viral segment 1 AM498052.2 5 20150307 197780 Bluetongue virus 8 complete viral segment 2 AM498053.1 4 20150307 197780 Bluetongue virus 8 complete viral segment 3 AM498054.1 4 20150307 197780 Bluetongue virus 8 complete viral segment 4 AM498056.2 5 20150307 197780 Bluetongue virus 8 complete viral segment 5 AM498055.2 6 20150307 197780 Bluetongue virus 8 complete viral segment 6 AM498057.2 5 20150307 197780 Bluetongue virus 8 complete viral segment 7 AM498058.1 4 20150307 197780 Bluetongue virus 8 complete viral segment 8 AM498059.1 4 20150307 197780 Bluetongue virus 8 complete viral segment 9 AM498060.1 4 20150307 197780 Bluetongue virus 8 complete viral segment 10 JF311903.1 1 20110810 1072176 Bokeloh bat lyssavirus isolate 21961 AB183384.1 2 20090127 284503 Bombyx mori cypovirus 1 satellite RNA AB624361.1 2 20120207 288456 Bombyx mori Macula-like virus genomic RNA FJ882854.1 2 20100421 640862 Bombyx mandarina nucleopolyhedrovirus JQ071499.1 2 20121024 1208064 Bombyx mandarina nucleopolyhedrovirus S2 L33180.1 9 20090411 271108 Bombyx mori nucleopolyhedrovirus isolate T3 JQ991011.1 2 20130613 271108 Bombyx mori nucleopolyhedrovirus strain Guangxi JQ991008.1 2 20130613 271108 Bombyx mori nucleopolyhedrovirus strain Zhejiang KC807166.1 3 20140604 1332245 Bontang virus strain JKT7774 GQ902940.1 2 20131216 358764 Border disease virus U70263.1 4 20050418 157731 Border disease virus - BD31 AJ311524.1 8 20120503 12455 Borna disease virus FN356900.1 3 20150210 1604874 Bornean orang-utan polyomavirus isolate Bo KM051424.1 1 20140928 1547580 Botryosphaeria dothidea victorivirus 1 isolate GY25 AM491609.1 2 20150307 425010 Botryotinia fuckeliana partitivirus 1 segment 1 AM491610.1 2 20150307 425010 Botryotinia fuckeliana partitivirus 1 segment 2 AM491611.1 2 20150307 425010 Botryotinia fuckeliana partitivirus 1 segment 3 AM491608.1 1 20070321 425009 Botryotinia fuckeliana totivirus 1 KJ549662.1 2 20150403 1568973 Botrytis cinerea RNA virus 1 strain BerBc-1 AF238884.1 2 20010111 129395 Botrytis virus F AY055762.1 2 20060308 174142 Botrytis virus X EU034539.1 1 20070806 263892 Bougainvillea chlorotic vein banding virus AF036092.3 10 20061114 70333 Bovine adenovirus 4 JQ345700.1 1 20130101 111167 Bovine adenovirus 6 strain 671130 KJ620980.1 1 20140605 1435485 Bovine astrovirus strain BAstV-GX27/CHN/2014 HQ916313.1 2 20110726 1027245 Bovine astrovirus B18/HK KM822593.1 1 20150204 1604873 Yak astrovirus isolate S8 HQ916317.1 2 20110726 1027247 Bovine astrovirus B76-2/HK HQ916316.1 2 20110726 1027248 Bovine astrovirus B76/HK HQ916314.1 2 20110726 1027244 Bovine astrovirus B170/HK KM035759.1 1 20140723 1522059 Bovine astrovirus CH13 AF234533.1 3 20001123 11303 Bovine ephemeral fever virus U94514.1 3 20050418 207343 Bovine foamy virus AJ004801.1 10 20100602 79889 Bovine herpesvirus type 1.1 KM258881.1 1 20140929 1548190 Bovine herpesvirus type 1.2 strain B589 KM258880.1 1 20140929 31519 Bovine herpesvirus type 1.2 strain K22 KM258882.1 1 20140929 1548191 Bovine herpesvirus type 1.2 strain SM023 KM258883.1 1 20140929 1548192 Bovine herpesvirus type 1.2 strain SP1777 AF318573.1 3 20050415 10385 Bovine herpesvirus 4 KJ705001.1 2 20140731 1504288 Bovine herpesvirus 6 isolate Pennsylvania 47 M32690.1 6 20061114 11657 Bovine immunodeficiency virus U21603.1 12 20070109 36370 Jembrana disease virus AF033818.1 6 20050415 11901 Bovine leukemia virus AF030154.1 4 20050415 10510 Bovine adenovirus 3 KM589359.1 1 20150430 1631554 Bovine nidovirus TCH5 KM983393.1 1 20150208 10571 Bovine papillomavirus isolate Aks-02 AY386265.1 4 20050416 129727 Bovine papular stomatitis virus strain BV-AR02 AF178654.1 3 20050415 11215 Bovine parainfluenza virus 3 strain Kansas/15626/84 D13942.1 12 20081001 10627 Bovine polyomavirus KM496323.1 2 20150403 1561702 Bovine polyomavirus 1 isolate 1S5 KM496324.1 2 20150403 1561703 Bovine polyomavirus 2a isolate 2aS11 KM496325.1 2 20150403 1561704 Bovine polyomavirus 2b isolate 2bS5 KM496326.1 2 20150403 1561705 Bovine polyomavirus 3 isolate 3S5 FJ938065.1 1 20090713 502108 Bovine respiratory coronavirus AH187 FJ938066.1 1 20090713 502105 Bovine respiratory coronavirus bovine/US/OH-440-TC/1996 AF092942.1 3 20050415 11246 Bovine respiratory syncytial virus AF295543.1 2 20050415 11247 Bovine respiratory syncytial virus ATCC51908 EU236594.1 2 20080411 693066 Bovine rhinitis B virus AY427798.1 2 20051216 46473 Breda virus strain Breda 1 AF220247.1 2 20050415 11099 Bovine viral diarrhea virus 1 AF091605.1 2 20050415 82470 Bovine viral diarrhea virus strain Oregon C24V JN704144.1 1 20120215 981676 Bovine viral diarrhea virus type 1b isolate 3156 FJ527854.1 1 20090513 54315 Bovine viral diarrhea virus 2 AF002227.1 5 20050415 60869 Bovine viral diarrhea virus 2 C413 HQ231763.1 1 20110822 381707 Bovine viral diarrhea virus 3 strain Italy-1/10-1 FJ040215.1 2 20090717 402584 Bovine viral diarrhea virus 3 Th/04_KhonKaen HQ388348.1 4 20111207 1046403 Brassica yellows virus isolate TuYV-ABJ EF517277.1 2 20070817 436447 Brevicoryne brassicae picorna-like virus AF225953.1 2 20030529 76875 Broad bean wilt virus 2 RNA1 AF225954.1 2 20030529 76875 Broad bean wilt virus 2 RNA2 X02380.1 4 19961029 12302 Brome mosaic virus RNA1 X01678.1 4 19961029 12302 Brome mosaic virus RNA2 J02042.1 4 20050417 12302 Brome mosaic virus RNA-3 Z48506.1 3 19950920 42631 Brome streak mosaic virus HQ113104.1 3 20110304 936005 Bromus catharticus striate mosaic virus, isolate AU QL 99 KM510190.1 1 20150113 1590154 Bromus-associated circular DNA virus 1 isolate BasCV-1_NZ-NZG03_Wel-2012 KM510191.1 1 20150113 1590155 Bromus-associated circular DNA virus 2 isolate BasCV-2_NZ-NZG03_Wel-2012 KM510192.1 1 20150113 1590156 Bromus-associated circular DNA virus 3 isolate BasCV-3_NZ-NZG01_Sef-2012 KP005454.1 1 20150113 1590172 Bromus-associated circular DNA virus 4 isolate BasCV-4_FR38-38-Cam AM398436.1 2 20100216 402399 Brugmansia mild mottle virus JX874139.1 2 20130604 1239452 Brugmansia mosaic virus isolate D-437 JX867236.1 6 20130901 1239452 Brugmansia mosaic virus strain SK AB551370.1 1 20100922 487155 Brugmansia suaveolens mottle virus genomic RNA, complete genome, strain: Bs-Campinas AF118150.1 4 20050415 10625 Budgerigar fledgling disease polyomavirus FJ376620.1 3 20090101 572287 Bulbul coronavirus HKU11-796 FJ376619.2 3 20090101 572288 Bulbul coronavirus HKU11-934 KC545396.1 2 20130627 565995 Bundibugyo virus isolate EboBund-14 2012 X14383.1 2 19910730 35304 Bunyamwera virus segment L M11852.1 3 20060803 35304 Bunyamwera virus segment M D00353.1 4 20030707 35304 Bunyamwera virus segment S KF859964.1 1 20140711 1518575 Human astrovirus BF34 KF360862.1 1 20131212 1394033 Butcherbird polyomavirus isolate AWH19840 AB517596.1 1 20100210 666859 Butterbur mosaic virus KF611977.1 3 20140515 74320 Buzura suppressaria nucleopolyhedrovirus isolate Hubei L14546.1 2 20000304 31559 Cacao swollen shoot virus KF917536.1 1 20150305 64305 Cacipacore virus strain BeAn 3276000 AF308158.2 3 20040427 112227 Cactus virus X JN819202.1 1 20120228 1150861 Canine picodicistrovirus strain 209 GU244497.1 2 20101111 693272 Cafeteria roenbergensis virus BV-PW1 GQ244431.1 2 20100202 204928 Calibrachoa mottle virus AF528165.1 2 20030529 11577 La Crosse virus segment L AF528166.1 2 20030529 11577 La Crosse virus segment M AF528167.1 2 20030529 11577 La Crosse virus segment S GQ331138.1 3 20110720 715223 California sea lion polyomavirus 1 AF319782.2 3 20050415 106331 Callitrichine herpesvirus 3 strain CJ0149 AY009089.1 5 20050416 203172 Camelpox virus CMS HQ912791.1 2 20110726 996651 Camelus dromedarius papillomavirus type 2 AJ301633.2 5 20030521 142661 Canary circovirus GU345044.1 2 20101119 881945 Canary polyomavirus isolate CaPyV-Ha09 AY318871.1 2 20050416 44088 Canarypox virus strain ATCC VR-111 KP404149.1 2 20150424 1157338 Canine astrovirus strain Gillingham/2012/UK KC580640.1 1 20130225 1295080 Canine bocavirus 3 isolate UCD GQ475302.1 1 20090929 673763 Calicivirus isolate Allston 2008/US GQ475301.1 1 20090929 673764 Calicivirus isolate Allston 2009/US JQ821392.1 1 20120606 1194757 Canine circovirus isolate 214 AF164967.1 2 20050415 11232 Canine distemper virus Y07760.1 9 20050418 10512 Canine adenovirus 1 U77082.1 3 20050418 10514 Canine adenovirus 2 JF800656.1 2 20120725 1087108 Canine papillomavirus 9 JF800657.1 1 20111010 1087109 Canine papillomavirus 10 JQ701802.1 2 20130128 1236767 Canine papillomavirus 14 from Switzerland JX899359.1 1 20121219 1272519 Canine papillomavirus 15 isolate Hercules2012 KP099966.1 1 20150305 1619253 Canine papillomavirus 16 isolate Chana JN831356.1 3 20120606 1196647 Canine picornavirus KF015281.1 1 20140120 1408279 Canine pneumovirus strain dog/Bari/100-12/ITA/2012 JN204722.1 1 20120703 1176484 Canine vesivirus strain Bari/212/07/ITA KF261120.1 3 20141203 1394979 Cannes 8 virus M33677.1 6 20050417 11660 Caprine arthritis encephalitis virus FJ195346.1 2 20090618 621214 Caprine arthritis encephalitis virus Ov496 EU293537.2 3 20090101 507757 Caprine arthritis encephalitis virus Roccaverano HM210570.1 1 20100907 254355 Small ruminant lentivirus KF793927.1 4 20140828 1452516 Caprine kobuvirus isolate 12Q108 DQ256125.1 1 20060815 163325 Capsicum chlorosis virus segment M DQ256123.1 1 20060815 163325 Capsicum chlorosis virus segment S L16015.1 5 20050417 31711 Cardamine chlorotic fleck virus AM933578.1 1 20080127 497865 Cardiospermum yellow leaf curl betasatellite KJ938717.1 2 20150314 1542743 Caribou feces-associated gemycircularvirus X04658.1 10 20050418 10640 Carnation etched ring virus X85215.3 10 20100521 39443 Carnation Italian ringspot virus AF192772.1 2 20050415 11986 Carnation mottle virus L18870.2 7 20050417 12268 Carnation ringspot virus RNA 1 M88589.2 5 19990315 12268 Carnation ringspot virus RNA 2 M20036.1 6 20050417 28314 Aleutian mink disease virus AB158475.1 1 20041201 329639 Canine minute virus JN648103.1 3 20140623 1511885 Canine bocavirus 1 isolate Con-161 JQ692586.1 2 20120626 1174530 Feline bocavirus strain HK797U D26079.1 8 20080216 10788 Canine parvovirus JQ268283.1 1 20130606 497961 Canine parvovirus 2a strain CPV-LZ1 JQ268284.1 1 20130606 568986 Canine parvovirus 2b strain CPV-LZ2 KP280068.1 2 20150409 10786 Feline panleukopenia virus isolate HRB-CS1 KF306267.1 1 20140102 1439369 Carp picornavirus 1 isolate F37/06 U57305.1 8 20081126 47736 Carrot mottle mimic virus FJ188473.1 1 20081103 68033 Carrot mottle virus AY695933.1 5 20060111 66200 Carrot red leaf virus strain UK-1 JX156435.1 1 20130715 114922 Carrot thin leaf virus isolate CTLV-Dc FJ869862.1 2 20090821 656190 Carrot yellow leaf virus JQ412057.1 2 20120517 1170653 Cassava associated cicular DNA virus isolate G5 HG965221.1 1 20140326 137758 Cassava brown streak virus, isolate CBSV-[TZ;Nal;07] U23414.1 3 20000304 39046 Cassava common mosaic virus U20341.1 4 20050417 38062 Cassava vein mosaic virus KJ125489.1 3 20140515 1482319 Casuarina virus isolate 0071 HE580235.1 1 20110815 1076345 Catharanthus yellow mosaic virus, clone KN5 V00140.1 13 20061114 10641 Cauliflower mosaic virus HG531783.1 2 20140123 1415526 Caviid herpesvirus 2 str. CIDMTR JX159988.2 7 20140620 1236392 Cebus albifrons polyomavirus 1 JQ001776.1 1 20120819 1221391 Cedar virus isolate CG1a HQ676607.1 2 20110501 112436 Celery mosaic virus isolate California KJ741267.1 2 20150206 31658 Cell fusing agent virus strain Galveston AY714813.1 2 20050112 10317 Cercopithecine herpesvirus 2 FJ483969.2 3 20130510 50292 Cercopithecine herpesvirus 5 AF275348.3 7 20070126 35246 Cercopithecine herpesvirus 9 JX159985.1 5 20140620 1236395 Cercopithecus erythrotis polyomavirus 1 AF235168.2 3 20030422 228582 Cereal yellow dwarf virus-RPS L25299.1 5 20061114 191217 Cereal yellow dwarf virus-RPV M63666.1 6 20020409 191032 Cereal yellow dwarf virus-RPV satellite RNA AJ608288.1 4 20050511 37131 Dolphin morbillivirus JX520657.1 3 20130326 1276181 Chaerephon polyomavirus 1 isolate KY397 AB553581.1 2 20110803 754441 Chaetoceros lorenzianus DNA Virus AB193315.2 5 20091004 674980 Chaetoceros salsugineum DNA virus AB781089.1 2 20140109 1290581 Chaetoceros setoense DNA virus AB597949.1 2 20140109 915486 Chaetoceros tenuissimus DNA virus AB971658.1 2 20150218 1516127 Chaetoceros tenuissimus DNA virus type-II DNA isolate: SS10-8V GU212858.1 1 20101028 11272 Chandipura virus isolate CIN 0327 JQ308185.1 1 20120327 631267 Chaoyang virus isolate HLD115 EU260464.1 1 20080403 499556 Chapare virus segment L EU260463.1 1 20080403 499556 Chapare virus segment S AF195000.2 3 20050415 71030 Chayote mosaic virus AM261426.1 5 20091106 36344 Chelonus inanitus Bracovirus HM626515.1 1 20110522 1032478 Chenopodium leaf curl virus HM626516.1 1 20110522 1032479 Chenopodium leaf curl virus [VEM] AF017780.1 1 19980923 65467 Cherry green ring mottle virus FR851462.1 1 20110421 12615 Cherry leaf roll virus RNA2, isolate E395 AF170028.1 2 20020327 131226 Cherry mottle leaf virus AF237816.1 1 20000701 129143 Cherry necrotic rusty mottle virus KC218926.1 2 20130809 1312929 Cherry rusty mottle associated virus isolate 95CI192R3 KF958838.1 2 20140924 1424279 Cherry twisted leaf associated virus isolate CTLV_8431 U66304.1 3 20061114 12618 Chicken anemia virus (attenuated) AF395114.1 2 20040917 12618 Chicken anemia virus strain BD-3 JF414802.1 2 20120216 336959 Chicken astrovirus isolate GA2011 KF961187.1 1 20140326 1477515 Chicken megrivirus strain chicken/CHK-IV-CHV/2013/HUN KM203656.1 1 20141106 1565990 Chicken orivirus 1 strain chicken/Pf-CHK1/2013/HUN JN989418.1 3 20130317 1302848 Chickpea chlorosis Australia virus isolate CpCV-D_AU_2008_2007 KC172700.1 2 20130912 930965 Chickpea chlorosis virus isolate F 3487J GU256530.1 2 20101130 887825 Chickpea chlorosis virus-A GU256531.1 2 20101130 887826 Chickpea chlorosis virus-B JN989417.1 2 20120517 1162554 Chickpea chlorosis virus-C isolate CpCV-C_AU_3494Ib_2002 JN989425.1 2 20120517 1162556 Chickpea chlorosis virus-E isolate CpCV-E_AU_3459G_2002 AM849097.1 2 20130404 463360 Chickpea chlorotic dwarf virus AM933135.1 3 20130404 463360 Chickpea chlorotic dwarf virus clone CpCDSV_Eco18 HE864164.1 3 20140512 463360 Chickpea chlorotic dwarf virus strain L KF176552.1 1 20130923 1400200 Chickpea chlorotic dwarf virus D isolate 4K1 AY956384.1 1 20060623 328430 Chickpea chlorotic stunt virus isolate Et-fb-am1 GU256532.1 2 20101130 887827 Chickpea redleaf virus KM377674.1 1 20141111 1568974 Chickpea yellow dwarf virus isolate CpYDV-PK_PK103_2012 JN989439.1 3 20120517 1162557 Chickpea yellows virus isolate CpYV_AU_3489B_2002 AY726732.1 2 20050609 37124 Chikungunya virus strain 37997 EU037962.1 2 20100826 466217 Chikungunya virus Wuerzburg 1 KF584013.1 2 20140515 1428342 Chilli leaf curl alphasatellite isolate Sikar Ch-AS EU582020.1 1 20090401 169690 Chilli leaf curl betasatellite FM179615.1 2 20091125 693900 Chilli leaf curl betasatellite - [Pakistan:Potato:2008] FM179614.1 1 20090225 661505 Chilli leaf curl Multan alphasatellite KF229718.1 1 20140403 1481460 Chili leaf curl virus-Oman isolate Tom-26 FM179613.1 1 20090225 546025 Chilli leaf curl Multan virus segment A JN604498.1 1 20120129 172278 Chilli leaf curl virus isolate Th3 HM140364.1 3 20120704 913595 Chilli leaf curl virus-DU [India:New Delhi:Papaya:2009] HM140365.1 3 20120704 913596 Chilli leaf curl virus-HD [India:New Delhi:Papaya:2007] HM140370.1 3 20120704 913598 Chilli leaf curl virus-Najafgarh2 [India:New Delhi:Papaya:2009] HM140371.1 3 20120704 913599 Chilli leaf curl virus-Noida [India:Uttar Pradesh:Papaya:2009] HM140366.1 3 20120704 913597 Chilli leaf curl virus-Panipat1 [India:Panipat:Papaya:2008] HM004433.1 2 20100804 749223 Chilli leaf curl virus-[Soyla:India:2009] JQ234922.1 1 20120305 414528 Chilli ringspot virus isolate ChiRSV-HN/Yingzhou AJ972878.1 1 20080108 52280 Chilli veinal mottle virus complete genome FN563123.1 2 20100509 688701 Chiltepin yellow mosaic virus FJ828987.1 2 20091001 638787 Chimeric Tick-borne encephalitis virus/Dengue virus 4 JQ360576.1 2 20130809 332937 Chimpanzee alpha-1 herpesvirus strain 105640 FR692334.1 1 20101201 305677 Chimpanzee polyomavirus, isolate Bob KP233190.1 1 20150131 1603067 Chimpanzee smacovirus isolate SF2 GQ351275.1 1 20100114 702718 Chimpanzee stool associated circular ssDNA virus GQ404851.1 1 20100315 743290 Chimpanzee stool avian-like circovirus Chimp17 AJ012005.1 2 20040617 83544 Chinese wheat mosaic virus RNA1 AJ012006.2 3 20040617 83544 Chinese wheat mosaic virus RNA2 AB710145.1 2 20121130 128818 Chinese yam necrotic mosaic virus genomic RNA isolate: PES3 KJ681496.1 1 20150410 1611837 Chinook salmon bafinivirus isolate NIDO DQ295066.1 2 20061115 360397 Canine papillomavirus 3 FJ492743.1 2 20091023 658422 Canine papillomavirus 5 JF800658.1 2 20140620 1091166 Canine papillomavirus 11 EF584537.1 2 20080207 464980 Canine papillomavirus 4 HQ262536.1 1 20110920 1081055 Canis familiaris papillomavirus 8 isolate Charlotte JQ037753.1 1 20120116 1131483 Eidolon helvum (bat) parvovirus GQ153938.1 2 20130421 741995 Chlamys acute necrobiotic virus M20021.1 4 20000304 10820 Chloris striate mosaic virus HF679132.1 3 20150227 10288 Choristoneura biennis entomopoxvirus 'L' AY327402.2 4 20050416 74660 Choristoneura fumiferana DEF multiple nucleopolyhedrovirus KF894742.1 2 20140204 1346828 Choristoneura murinana alphabaculovirus strain Darmstadt KC961303.1 1 20130728 1367204 Choristoneura occidentalis alphabaculovirus DQ333351.1 2 20070712 364745 Choristoneura occidentalis granulovirus KC961304.1 1 20130728 1367205 Choristoneura rosaceana alphabaculovirus HF679133.1 3 20150227 1293539 Choristoneura rosaceana entomopoxvirus 'L' AM493895.2 3 20120224 12165 Chrysanthemum virus B AY864330.1 2 20071221 320432 Chrysodeixis chalcites nucleopolyhedrovirus JX559621.1 3 20131216 1346815 Circo-like virus-Brazil hs1 JX559622.1 3 20131216 1346816 Circo-like virus-Brazil hs2 FJ959086.1 2 20090918 642260 Circovirus-like genome BBC-A FJ959082.1 2 20090918 642256 Circovirus-like genome CB-A FJ959083.1 2 20090918 642257 Circovirus-like genome CB-B FJ959077.1 2 20090918 642251 Circovirus-like genome RW-A FJ959078.1 2 20090918 642252 Circovirus-like genome RW-B FJ959079.1 2 20090918 642253 Circovirus-like genome RW-C FJ959080.1 2 20090918 642254 Circovirus-like genome RW-D FJ959081.1 2 20090918 642255 Circovirus-like genome RW-E FJ959084.2 3 20090918 642258 Circovirus-like genome SAR-A FJ959085.1 2 20090918 642259 Circovirus-like genome SAR-B GU979420.1 1 20100719 862944 Circulifer tenellus virus 1 JQ920490.1 2 20120726 1202142 Citrus chlorotic dwarf associated virus isolate TK4 KF800044.1 3 20140501 1435008 Citrus endogenous pararetrovirus clone CB17-2 EU857540.1 2 20100907 129141 Citrus leaf blotch virus FJ009367.1 3 20100928 557419 Dweet mottle virus U23715.1 4 19960124 37126 Citrus leaf rugose virus RNA 1 U17726.1 3 20000304 37126 Citrus leaf rugose virus RNA 2 U17390.1 3 20040622 37126 Citrus leaf rugose virus RNA 3 AY654892.1 2 20050122 73561 Citrus psorosis virus segment RNA1 AY654893.1 2 20050122 73561 Citrus psorosis virus segment RNA2 AY654894.1 2 20050122 73561 Citrus psorosis virus segment RNA3 AY884005.1 2 20050417 312008 Citrus sudden death-associated virus Y18420.1 2 19990406 12162 Citrus tristeza virus EU076703.3 3 20100708 12162 Citrus tristeza virus B165 AF260651.1 2 20000718 12162 Citrus tristeza virus T30 U16304.1 6 20061114 12162 Citrus tristeza virus T36 HF679486.1 2 20141002 1301220 Citrus vein enation virus, isolate VE-1 AF347695.1 1 20011027 174178 Citrus yellow mosaic virus JX040635.1 2 20140102 1214459 Citrus yellow vein clearing virus isolate Y1 from Turkey JX101610.1 1 20130731 1297894 Citrus yellow vein-associated virus isolate YV920 AY646427.1 4 20071101 11096 Classical swine fever virus AF407339.1 2 20050415 170646 Classical swine fever virus 39 AY554397.1 2 20050416 279150 Classical swine fever virus 96TD X87939.1 16 20100717 358769 Classical swine fever virus - Alfort/187 Z46258.1 23 20051125 358812 Classical swine fever virus - C AF326963.1 3 20050415 149596 Classical swine fever virus strain Eystrup FN435999.1 2 20150307 666144 Cleome leaf crumple virus segment DNA A FN436000.1 2 20150307 666144 Cleome leaf crumple virus segment DNA B FN436007.1 1 20100609 666146 Cleome leaf crumple virus associated DNA 1 FN396962.1 2 20150307 559878 Clerodendrum golden mosaic China virus segment DNA-A FN396963.1 2 20150307 559878 Clerodendrum golden mosaic China virus segment DNA-B FN396966.1 2 20150307 649509 Clerodendrum golden mosaic Jiangsu virus segment DNA-A FN396967.1 2 20150307 649509 Clerodendrum golden mosaic Jiangsu virus segment DNA-B HE717021.1 2 20120628 1162083 Clitocybe odora virus, isolate C-Holm JN566124.1 2 20120404 1128119 Clitoria yellow mottle virus isolate Larrimah HQ116624.1 2 20110629 283675 Clostera anachoreta granulovirus isolate ClanGV-HBHN KC179784.1 1 20131022 1352289 Clostera anastomosis granulovirus isolate CaLGV-Henan D29630.1 5 20040909 12177 Clover yellow mosaic virus AB011819.1 3 20050414 12198 Clover yellow vein virus GQ294473.1 2 20110911 764599 Coastal Plains virus EU373657.1 1 20080612 50713 Cocal virus EU081018.1 2 20090922 479060 Cocksfoot mild mosaic virus AB040447.1 3 20030707 40979 Cocksfoot mottle virus AF499738.1 3 20050415 192452 Cocksfoot streak virus M29963.1 4 20140306 1458187 Coconut foliar decay alphasatellite JQ801448.1 1 20130101 91613 Colombian datura virus HQ738642.1 2 20110323 942030 Circovirus NGchicken38/NGA/2009, isolate NGchicken38 AF252610.1 7 20010118 126070 Columbid circovirus LC035390.1 1 20150405 1414603 Pigeon circovirus DNA strain: PiCV/Japan/2/2010 X52938.1 5 19930912 10653 Commelina yellow mottle virus JQ065049.1 1 20120320 1159902 Common-moorhen coronavirus HKU21 strain HKU21-8295 KC223600.1 1 20130306 1297645 Corchorus yellow vein mosaic virus isolate CEA8 HM588723.1 2 20110505 937809 Cordyline virus 1 isolate Kahaluu-1 KM516909.1 1 20141217 1582094 Cosavirus JMY-2014 isolate Cosa-CHN AJ632304.1 5 20150307 39640 Cotesia congregata bracovirus Circle1 AJ632305.1 4 20150307 39640 Cotesia congregata bracovirus Circle2 AJ632306.1 5 20150307 39640 Cotesia congregata bracovirus Circle3 AJ632307.1 4 20150307 39640 Cotesia congregata bracovirus Circle4 AJ632308.1 6 20150307 39640 Cotesia congregata bracovirus Circle5 AJ632309.1 4 20150307 39640 Cotesia congregata bracovirus Circle6 AJ632310.1 4 20150307 39640 Cotesia congregata bracovirus Circle7 AJ632311.1 4 20150307 39640 Cotesia congregata bracovirus Circle8 AJ632312.1 4 20150307 39640 Cotesia congregata bracovirus Circle9 AJ632313.1 4 20150307 39640 Cotesia congregata bracovirus Circle10 AJ632314.1 4 20150307 39640 Cotesia congregata bracovirus Circle11 AJ632315.1 5 20150307 39640 Cotesia congregata bracovirus Circle12 AJ632316.1 4 20150307 39640 Cotesia congregata bracovirus Circle13 AJ632317.1 4 20150307 39640 Cotesia congregata bracovirus Circle14 AJ632318.1 4 20150307 39640 Cotesia congregata bracovirus Circle15 AJ632319.1 3 20150307 39640 Cotesia congregata bracovirus Circle17 AJ632320.1 5 20150307 39640 Cotesia congregata bracovirus Circle18 AJ632321.1 6 20150307 39640 Cotesia congregata bracovirus Circle19 AJ632322.1 4 20150307 39640 Cotesia congregata bracovirus Circle20 AJ632323.1 3 20150307 39640 Cotesia congregata bracovirus Circle21 AJ632324.1 4 20150307 39640 Cotesia congregata bracovirus Circle22 AJ632325.1 4 20150307 39640 Cotesia congregata bracovirus Circle23 AJ632326.1 4 20150307 39640 Cotesia congregata bracovirus Circle25 AJ632327.1 4 20150307 39640 Cotesia congregata bracovirus Circle26 AJ632328.1 4 20150307 39640 Cotesia congregata bracovirus Circle30 AJ632329.1 5 20150307 39640 Cotesia congregata bracovirus Circle31 AJ632330.1 4 20150307 39640 Cotesia congregata bracovirus Circle32 AJ632331.1 4 20150307 39640 Cotesia congregata bracovirus Circle33 AJ632332.1 4 20150307 39640 Cotesia congregata bracovirus Circle35 AJ632333.1 4 20150307 39640 Cotesia congregata bracovirus Circle36 DQ075354.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 2 DQ075355.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 3 DQ075356.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 4 DQ075357.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 5 DQ075358.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 8 DQ075359.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 9 EF067319.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 10 DQ075360.1 4 20090821 256130 Cotesia plutellae polydnavirus segment 11 EF067320.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 14 EF067321.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 16 EF067322.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 21 EF067323.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 22 EF067324.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 27 AY651829.1 5 20090821 256130 Cotesia plutellae polydnavirus segment 28 AY651828.1 3 20090821 256130 Cotesia plutellae polydnavirus segment 30 AY651830.1 3 20090821 256130 Cotesia plutellae polydnavirus segment 33 EF067325.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 35 EF067326.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 36 EF067327.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 37 EF067328.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 38 EF067329.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 41 EF067330.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 48 EF067331.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 50 EF067332.1 2 20090821 256130 Cotesia plutellae polydnavirus segment 51 KM595078.1 1 20141023 39444 Cotia virus strain SPAn880 HQ647181.2 4 20120419 930275 Cotia virus SPAn232 AJ292769.1 3 20020402 134386 Cotton leaf curl betasatellite FR750323.1 1 20101223 620894 Cotton leaf curl Burewala virus, clone MV18A AM421522.1 3 20100811 418448 Cotton leaf curl Burewala virus - [India:Vehari:2006] AF155064.2 5 20050415 222459 Cotton leaf curl Gezira virus HE793429.1 2 20130507 627501 Cotton leaf curl Gezira virus-[Cameroon] isolate Mue5:BCG AY036010.1 6 20051129 222461 Cotton leaf curl Gezira virus-[Okra/Egypt] segment A EU024120.1 2 20090319 454129 Okra leaf curl Mali virus FN552006.1 2 20100907 222464 Cotton leaf curl Kokhran virus AJ496286.1 3 20040517 222466 Cotton leaf curl Kokhran virus-[Faisalabad1] isolate x2f HF564600.1 1 20150105 1048668 Cotton leaf curl Multan alphasatellite clone AS1 HF564601.1 1 20150105 1048668 Cotton leaf curl Multan alphasatellite clone AS2 HF564602.1 1 20150105 1048668 Cotton leaf curl Multan alphasatellite clone AS3 HF564605.1 1 20150105 1048668 Cotton leaf curl Multan alphasatellite clone AS4 HE978345.1 1 20150105 1048668 Cotton leaf curl Multan alphasatellite clone AS23 HE978346.1 1 20150105 1048668 Cotton leaf curl Multan alphasatellite clone AS24 EF465536.1 2 20080520 306025 Cotton leaf curl Multan betasatellite JX914662.1 1 20121228 223252 Cotton leaf curl Multan virus isolate JS-Hi-A-3-2 AJ496287.1 4 20050415 223255 Cotton leaf curl Multan virus-[Faisalabad2] AF363011.1 5 20060223 223259 Cotton leaf curl Rajasthan virus segment A FM202329.1 1 20090708 551238 Cotton leaf curl Rajasthan virus satellite DNA 1 FN552005.1 2 20100907 674996 Cotton leaf curl Shadadpur virus KM070822.1 1 20140805 189515 Cotton leaf curl virus betasatellite isolate IARI-34 GU440580.1 1 20100324 727987 Cotton leaf curl virus LKO-2 HQ827780.2 4 20121109 312295 Cotton leafroll dwarf virus HQ880243.1 2 20110601 12199 Cowpea aphid-borne mosaic virus isolate MG-Avr M28817.1 3 20000304 12303 Cowpea chlorotic mottle virus RNA 2 KC884248.1 1 20130804 67761 Cowpea mild mottle virus isolate CPMMV:BR:GO:01:1 X00729.1 6 20050418 12264 Cowpea mosaic virus (CPMV) middle-component RNA X00206.1 2 19930912 12264 Cowpea mosaic virus RNA 1 U20976.1 9 20020128 12627 Cowpea mottle virus M83830.1 8 20040909 12261 Cowpea severe mosaic virus RNA-1 M83309.1 3 20000304 12261 Cowpea severe mosaic virus RNA-2 AF482758.2 5 20060802 10243 Cowpox virus EF165536.1 2 20080320 417288 Crassocephalum yellow vein virus - Jinghong FN401520.1 1 20110622 653708 Crassocephalum yellow vein virus - Yuanjiang, genomic RNA, isolate YYJi3 HQ698924.1 2 20110302 1605972 Cricetid herpesvirus 2 Peru clone L KP974707.1 1 20150407 12136 Cricket paralysis virus isolate CrPV-3 AY389361.2 2 20040628 11593 Crimean-Congo hemorrhagic fever virus segment L AF467768.2 5 20050926 11593 Crimean-Congo hemorrhagic fever virus segment M U88410.1 2 20000304 11593 Crimean-Congo hemorrhagic fever virus segment S KJ802403.1 1 20140925 1541211 Cripavirus NB-1/2011/HUN KM588256.1 1 20141209 411248 Croton yellow vein mosaic betasatellite isolate KP1 JN817516.1 1 20120129 207697 Croton yellow vein mosaic virus isolate CYVMV-Del-Cr from India FN543112.1 2 20110531 671095 Croton yellow vein virus DQ192570.1 1 20060320 349563 Crow polyomavirus AF082191.1 1 19990211 40281 Cryphonectria hypovirus 1 L29010.1 4 20000304 40268 Cryphonectria hypovirus 2-NB58 AF188515.1 2 20001027 106962 Cryphonectria hypovirus 3 AY229987.1 3 20050416 35254 Cryptophlebia leucotreta granulovirus AF321057.1 3 20120404 146499 Cucumber fruit mottle mosaic virus D12505.1 18 20070927 12235 Cucumber green mottle mosaic virus DQ227315.1 2 20070131 165432 Cucumber leaf spot virus D10538.1 5 20071101 12305 Cucumber mosaic virus RNA3 D00356.1 11 20080621 12305 Cucumber mosaic virus segment RNA1 strain Fny D00355.1 5 20030707 12305 Cucumber mosaic virus segment RNA2 strain Fny AJ276479.1 4 20150307 255721 Cucumber mosaic virus (strain Mf) RNA1 AJ276480.1 5 20150307 255721 Cucumber mosaic virus (strain Mf) RNA2 AJ276481.1 5 20150307 255721 Cucumber mosaic virus (strain Mf) RNA3 M10686.1 5 20020606 12436 Cucumber mosaic virus satellite RNA AB261167.1 2 20100907 388038 Cucumber mottle virus M25270.1 6 20050417 12143 Cucumber necrosis virus AY578085.1 3 20050831 137475 Cucumber vein yellowing virus strain ALM32 EU000535.1 1 20080601 91753 Cucurbit aphid-borne yellows virus AF224760.2 6 20050415 134681 Cucurbit leaf crumple virus segment A AF224761.2 5 20030529 134681 Cucurbit leaf crumple virus segment B AB262759.2 4 20080621 390844 Culex flavivirus AF403738.1 3 20050415 130556 Culex nigripalpus nucleopolyhedrovirus JQ429443.1 2 20121026 1236047 Culex originated Tymoviridae-like virus AB604791.1 2 20140704 936308 Culex tritaeniorhynchus rhabdovirus RNA, strain: TY AY216519.2 2 20080110 208899 Cupixi virus segment L AF512832.1 5 20080913 208899 Cupixi virus segment S HQ731075.1 2 20110527 1016879 Cutthroat trout virus isolate Heenan88 JX908740.1 3 20130710 1282444 Cyanoramphus nest associated circular K DNA virus JX908739.1 3 20130710 1282443 Cyanoramphus nest associated circular X DNA virus EU853709.1 1 20080729 549205 Cycad leaf necrosis virus HQ738637.1 2 20110323 942035 Cyclovirus bat/USA/2009 isolate CyCV-TB GQ404849.1 1 20100315 742920 Cyclovirus Chimp11 GQ404850.1 1 20100315 742921 Cyclovirus Chimp12 GQ404854.1 1 20100315 742922 Cyclovirus NG12 GQ404855.1 1 20100315 742923 Cyclovirus NG14 HQ738643.1 2 20110323 942036 Cyclovirus NGchicken8/NGA/2009 isolate NGchicken8 HQ738644.1 2 20110323 942037 Cyclovirus NGchicken15/NGA/2009 isolate NGchicken15 GQ404844.1 1 20100315 742915 Cyclovirus PK5006 GQ404845.1 1 20100315 742916 Cyclovirus PK5034 GQ404846.1 1 20100315 742917 Cyclovirus PK5222 GQ404847.1 1 20100315 742918 Cyclovirus PK5510 GQ404848.1 1 20100315 742919 Cyclovirus PK6197 HQ738636.1 2 20110323 942034 Cyclovirus PKgoat11/PAK/2009 isolate PKgoat11 HQ738634.1 2 20110323 942032 Cyclovirus PKbeef23/PAK/2009 isolate PKbeef23 HQ738635.1 2 20110323 942033 Cyclovirus PKgoat21/PAK/2009 isolate PKgoat21 GQ404858.1 1 20100315 742925 Cyclovirus TN18 GQ404857.1 1 20100315 742924 Cyclovirus TN25 KF031469.1 1 20130702 1348500 Cyclovirus VN isolate hcf5 AB937981.1 1 20141101 1506567 Cyclovirus ZM01 AB937980.1 1 20141101 1506566 Cyclovirus ZM32 AB937983.1 1 20141101 1506569 Cyclovirus ZM38 AB937984.1 1 20141101 1506570 Cyclovirus ZM41 AB937985.1 1 20141101 1506571 Cyclovirus ZM50a AB937986.1 1 20141101 1506572 Cyclovirus ZM54 AB937987.1 1 20141101 1506573 Cyclovirus ZM62 KM392286.1 1 20141216 1573583 Swine cyclovirus strain SC_CGS77 AB937982.1 1 20141101 1506568 Cyclovirus ZM36a U53466.2 7 20050417 28289 Cydia pomonella granulovirus U62963.1 2 20000304 12178 Cymbidium mosaic virus X15511.1 7 20050418 12144 Cymbidium ringspot virus AF389462.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 1 AF389463.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 2 AF389464.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 3 AF389465.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 4 AF389466.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 5 AF389467.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 6 AF389468.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 7 AF389469.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 8 AF389470.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 9 AF389471.1 2 20030529 165803 Lymantria dispar cypovirus 1 segment 10 AF389452.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 1 AF389453.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 2 AF389454.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 3 AF389455.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 4 AF389456.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 5 AF389457.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 6 AF389458.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 7 AF389459.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 8 AF389460.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 9 AF389461.1 2 20030529 165429 Lymantria dispar cypovirus 14 segment 10 AF291683.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 1 AF291684.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 2 AF291685.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 3 AF291686.3 4 20030529 134606 Trichoplusia ni cypovirus 15 segment 4 AF291687.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 5 AF291688.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 6 AF291689.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 7 AF291690.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 8 AF291691.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 9 AF291692.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 10 AF291693.1 3 20030529 134606 Trichoplusia ni cypovirus 15 segment 11 JQ815363.1 2 20130310 317858 Cyprinid herpesvirus 1 strain NG-J1 JQ815364.1 2 20130310 317878 Cyprinid herpesvirus 2 strain ST-J1 KJ627438.1 2 20150213 180230 Cyprinid herpesvirus 3 strain KHV-GZ11 JN032736.1 3 20111207 1077151 Dahlia common mosaic virus isolate DCMV-NZ JX272320.1 2 20140902 213888 Dahlia mosaic virus clone pDaMV-p2 AB753015.2 4 20140408 1238455 Dak Nong virus RNA KF963252.1 3 20140501 1469956 Danaus plexippus plexippus iteravirus isolate Granby DQ299908.1 4 20081216 578107 Daphne mosaic virus AJ298033.1 2 20050415 29271 Dasheen mosaic virus KP126831.1 1 20150211 1609188 De Brazza's monkey arterivirus isolate TNp09 GU371276.1 2 20100729 797418 Fenneropenaeus chinensis hepandensovirus DQ002873.1 3 20140623 1513204 Penaeus monodon hepandensovirus 1 AF218266.2 3 20091209 1513224 Decapod penstyldensovirus 1 AY689436.1 2 20061004 305674 Deerpox virus W-848-83 AY689437.1 2 20061004 305676 Deerpox virus W-1170-84 HM067437.1 2 20101223 198112 Deformed wing virus M15953.1 9 20081018 10565 Deltapapillomavirus 1 M11910.1 4 20050417 10564 Deltapapillomavirus 2 U83594.1 3 20050418 56144 Deltapapillomavirus 3 U83595.1 3 20050418 56145 Ovine papillomavirus type 2 JX174438.1 2 20121216 1229657 Bos grunniens papillomavirus type 1 strain QH-2 X02346.1 9 20081023 10559 Bovine papillomavirus type 1 M20219.1 4 20050417 10560 Bovine papillomavirus type 2 JQ798171.1 2 20130128 1232138 Bovine papillomavirus type 13 KP276343.1 1 20150416 1639825 Bovine papillomavirus type 14 isolate CGKnose1 EF680235.1 1 20080702 470214 Capreolus capreolus papillomavirus 1 HQ912790.1 2 20110726 996650 Camelus dromedarius papillomavirus type 1 KF907503.1 2 20141122 12637 Dengue virus strain Dakar HD 34460 JN054255.1 5 20140515 11053 Dengue virus 1 isolate DV1_SL_2010b U88536.1 4 20050418 11053 Dengue virus 1 M19197.1 3 20000304 11060 Dengue virus 2 M93130.1 6 20050417 11069 Dengue virus 3 AF326825.1 2 20030502 11070 Dengue virus 4 KP175581.1 1 20150314 1622024 Desmodus rotundus endogenous retrovirus isolate 216 JQ958892.1 5 20150204 1606503 Desmodus rotundus polyomavirus 1 isolate AT7 CU469068.1 2 20110329 158683 Diadromus pulchellus ascovirus 4a AF142094.1 2 20001130 111470 Diaporthe ambigua RNA virus 1 AF036333.1 2 20050415 72003 Diatraea saccharalis densovirus JQ948088.1 2 20121014 1196237 Digitaria ciliaris striate mosaic virus isolate AU-QG5-2011 M23022.1 5 20050417 10837 Digitaria streak virus KF843822.1 1 20141203 1541119 Dinocampus coccinellae paralysis virus strain Quebec2013 DQ822073.1 2 20070324 52996 Dioscorea bacilliform virus EU547739.1 2 20110406 459770 Diplodia scrobiculata RNA virus 1 FJ810126.1 2 20090618 185638 Culex pipiens densovirus FJ360744.1 4 20140623 1513196 Aedes aegypti densovirus 2 strain 0814616 EU233812.1 1 20081002 487311 Anopheles gambiae densovirus X74945.1 3 20140724 1513199 Aedes albopictus densovirus 2 AF316992.1 5 20030529 148880 Discula destructiva virus 1 segment 1 AF316993.1 5 20030529 148880 Discula destructiva virus 1 segment 2 AF316994.2 5 20030529 148880 Discula destructiva virus 1 segment 3 AF316995.1 5 20030529 148880 Discula destructiva virus 1 segment 4 JX173276.1 2 20130310 1247115 Diuris virus A isolate SW3.3 JX173277.1 2 20130310 1247116 Diuris virus B isolate SW3.3 AJ410617.1 3 20150307 12506 Dobrava-Belgrade virus segment L AJ410616.1 3 20150307 12506 Dobrava-Belgrade virus segment M AJ410615.1 3 20150307 12506 Dobrava-Belgrade virus segment S JX315325.1 1 20120925 333968 Dolichos yellow mosaic virus clone JD18 KF958252.1 2 20140801 1511639 Dolphin rhabdovirus isolate pxE1 1992 JQ086551.1 1 20120320 985683 Donggang virus isolate DG0909 KC923234.1 1 20131126 1400526 Donkey orchid symptomless virus isolate Mariginiup11 DQ473478.1 2 20070801 380669 Dracaena mottle virus JX185415.1 2 20121122 1234872 Dragonfly circularisvirus isolate TO-DF3E-2010 JX185418.1 2 20121122 1234878 Dragonfly cyclicusvirus isolate FL1-NZ37-2010 JX185419.1 2 20121122 1234879 Dragonfly cyclovirus 1 isolate TO-DFpB1-2010 JX185423.1 2 20121122 1234880 Dragonfly cyclovirus 2 isolate FL3-8E-2010 JX185424.1 2 20121122 1234881 Dragonfly cyclovirus 3 isolate FL2-5E-2010 JX185425.1 2 20121122 1234882 Dragonfly cyclovirus 4 isolate BG-NZ46-2007 KC512916.1 2 20141127 1234882 Dragonfly cyclovirus 4 isolate DfCyV-4_US-DFKWGX-2012 JX185427.1 2 20121122 1234883 Dragonfly cyclovirus 5 isolate PR-NZ47-2010 KF738873.1 3 20140713 1454021 Dragonfly larvae associated circular virus-1 isolate DflaCV-1_NZ-PG11-LD KF738874.1 3 20140713 1454023 Dragonfly larvae associated circular virus-2 isolate DflaCV-2_NZ-PG8-LS KF738875.1 3 20140713 1454024 Dragonfly larvae associated circular virus-3 isolate DflaCV-3_NZ-PG1-LG KF738877.1 3 20140713 1454025 Dragonfly larvae associated circular virus-4 isolate DflaCV-4_NZ-PG3-LG KF738878.1 3 20140713 1454026 Dragonfly larvae associated circular virus-5 isolate DflaCV-5_NZ-PG2-LG KF738880.1 3 20140713 1454027 Dragonfly larvae associated circular virus-6 isolate DflaCV-6_NZ-PG9-LD KF738881.1 3 20140713 1454028 Dragonfly larvae associated circular virus-7 isolate DflaCV-7_NZ-PG5-LH KF738882.1 3 20140713 1454029 Dragonfly larvae associated circular virus-8 isolate DflaCV-8_NZ-PG5-LS KF738883.1 3 20140713 1454030 Dragonfly larvae associated circular virus-9 isolate DflaCV-9_NZ-PG10-LD KF738884.1 3 20140713 1454022 Dragonfly larvae associated circular virus-10 isolate DflaCV-10_NZ-XZ2-LS JX185430.1 2 20121122 1234887 Dragonfly-associated circular virus 1 isolate FL1-2X-2010 JX185429.1 2 20121122 1234886 Dragonfly-associated circular virus 2 isolate FL2-5X-2010 JX185428.1 2 20121122 1234884 Dragonfly-associated circular virus 3 isolate TO-DFS3B2-2010 JX458740.1 2 20130310 1249648 Dragonfly-associated mastrevirus isolate PR_NZ50_2009 KP345887.1 1 20150407 1637527 Dromedary camel enterovirus strain 19CC KM573766.1 1 20141203 1574422 Dromedary stool-associated circular ssDNA virus isolate DcSCV_c1054 FJ150422.1 2 20090815 595895 Drosophila A virus AF014388.1 7 20000303 64279 Drosophila C virus KF242511.1 1 20140720 1500866 Drosophila immigrans Nora virus GQ375258.1 2 20091210 666961 Drosophila melanogaster sigmavirus HAP23 GQ342961.1 2 20100205 663282 Drosophila melanogaster totivirus SW-2009a GQ410979.1 2 20091210 666962 Drosophila obscura sigmavirus 10A KF242510.1 1 20140720 1500865 Drosophila subobscura Nora virus KJ469653.1 2 20140813 1520006 Duck adenovirus 2 strain GR Y09598.1 4 20050418 130329 Duck adenovirus 1 FJ919226.1 1 20100630 707882 Duck astrovirus 1 DQ100076.1 3 20070420 324685 Duck circovirus isolate 33753-52 HQ180266.1 1 20110213 232802 Mulard duck circovirus isolate TD/41/09 AY394721.1 2 20060525 257468 Muscovy duck circovirus isolate TC1/2002 HQ654774.1 1 20110621 691956 Duck hepatitis A virus strain JS2010 DQ812094.2 4 20110415 1006061 Duck hepatitis A virus 1 isolate DHV-HS DQ219396.1 3 20110415 1006061 Duck hepatitis A virus 1 strain DRL-62 DQ256132.1 2 20110415 1006063 Duck hepatitis A virus 3 isolate AP-03337 DQ256133.1 2 20110415 1006063 Duck hepatitis A virus 3 isolate AP-04009 DQ812093.1 3 20110415 1006063 Duck hepatitis A virus 3 isolate AP-04114 DQ256134.1 2 20110415 1006063 Duck hepatitis A virus 3 isolate AP-04203 GQ122332.1 2 20110415 1006063 Duck hepatitis A virus 3 strain GD EF067923.1 1 20070606 427748 Duck hepatitis virus 2 strain 04G EF067924.1 1 20070606 427749 Duck hepatitis virus 2 strain 90D DQ812092.1 2 20071101 398066 Duck hepatitis virus DHV-HSS EU755009.1 1 20080627 542654 Duck hepatitis virus G GQ485310.1 1 20090923 673840 Duck hepatitis virus SD01 GQ485311.1 1 20090923 673841 Duck hepatitis virus SD02 X60213.1 5 20010322 12639 Duck hepatitis B virus isolate DHBVQCA34 X74623.1 10 20010322 12639 Duck hepatitis B virus isolate IDHBV KF313137.1 1 20130922 1400257 Duck infectious anemia virus strain ATCC-VR775 KC663628.1 1 20140518 1350001 Duck megrivirus strain LY KJ000696.1 4 20140529 1482734 Duck picornavirus GL/12 U15018.1 3 20000304 11595 Dugbe virus segment L M94133.1 4 20000304 11595 Dugbe virus segment M AF434161.1 3 20030529 11595 Dugbe virus segment S AY789137.1 4 20090924 70823 Dulcamara mottle virus EU293119.1 1 20080516 38767 Duvenhage virus EF395818.1 1 20080924 446138 Sus scrofa papillomavirus 1 EU188799.1 1 20090818 485362 Francolinus leucoscepus papillomavirus 1 FJ796965.1 3 20101014 634772 Ovis aries papillomavirus 3 isolate Sar1 GU220391.1 1 20100513 759701 Bettongia penicillata papillomavirus 1 HQ262535.1 1 20110920 1081054 Morelia spilota papillomavirus 1 isolate Zurich 2009 HQ293213.1 1 20110327 998829 Zalophus californianus papillomavirus 1 strain ZcPV1_2008 JF304765.1 1 20140210 990304 Saimiri sciureus papillomavirus 1 isolate Mac2066 JF304766.1 1 20140210 990305 Saimiri sciureus papillomavirus 2 isolate Mac2067.1 JF304767.1 1 20140210 990306 Saimiri sciureus papillomavirus 3 isolate Mac2167.2 GU117623.1 1 20110403 706527 Phocoena phocoena papillomavirus 4 KC020689.2 2 20140110 1352235 Castor canadensis papillomavirus 1 isolate CcanPV1 KM096429.1 1 20141009 1001533 Bos taurus papillomavirus 7 strain IT-221 EU493092.1 2 20090227 485241 Caretta caretta papillomavirus 1 EU493091.1 2 20090227 485242 Chelonia mydas papillomavirus 1 AF112354.1 5 20050415 223262 East African cassava mosaic Cameroon virus DNA-A AF112355.1 4 20040619 223262 East African cassava mosaic Cameroon virus DNA-B HE979773.1 1 20130816 62079 East African cassava mosaic virus segment DNA-A, isolate EACMV-UG[UG:Nam:CMD-MI54:12] FM877474.1 2 20090723 581119 East African cassava mosaic virus-Uganda BFA/2008 HE806428.1 2 20130212 223275 East African cassava mosaic Zanzibar virus complete segment DNA A, isolate SB2 AB246773.1 3 20080621 341167 East Asian Passiflora virus strain: AO AY722102.1 2 20051223 11021 Eastern equine encephalitis virus strain PE6 GQ478343.1 1 20110801 875324 Eclipta yellow vein virus clone EcYVV-[PK,Fai,06] KC476655.1 2 20140421 1417755 Eclipta yellow vein virus [India: Lucknow: Andrographis paniculata:2010] isolate CSIR-CIMAP-A24 AF204951.2 7 20070911 37665 Ectocarpus siliculosus virus 1 KJ563295.1 1 20140717 12643 Ectromelia virus isolate NAVAL JQ410350.1 2 20140126 1452750 Ectromelia virus ERPV culture-collection ATCC:VR-1431 DQ837165.1 3 20070420 59376 Ectropis obliqua nucleopolyhedrovirus strain A1 KC843627.1 1 20130911 1398149 Eel picornavirus 1 strain F15/05 J04374.1 4 20050417 12151 Eggplant mosaic virus JQ864181.1 1 20140123 270256 Eggplant mottled crinkle virus DQ011234.1 1 20060501 334425 Lisianthus necrosis virus KJ082087.1 1 20140326 488317 Eggplant mottled dwarf virus isolate Agapanthus JX520660.1 3 20130326 1276187 Eidolon polyomavirus 1 isolate KY270 JX678730.1 2 20131216 1231903 Eilat virus isolate EO329 AF356189.1 1 20010329 155414 Eimeria brunetti RNA virus 1 KF921519.1 3 20140815 768738 Elephant endotheliotropic herpesvirus 5 strain Vijay KC618527.1 2 20130421 759753 Elephant endotheliotropic herpesvirus 1A KC462165.1 3 20140424 146015 Elephantid herpesvirus 1 strain Raman U57047.1 3 20001003 56486 Elm mottle virus RNA 1 U34050.1 4 20040622 56486 Elm mottle virus RNA 2 U85399.1 3 20031016 56486 Elm mottle virus RNA 3 JQ247188.1 1 20120326 498803 Emilia yellow vein virus isolate Fz12 EU377539.1 1 20080205 498805 Emilia yellow vein virus-[Fz1] FJ869906.1 1 20090429 640136 Emilia yellow vein virus-associated DNA beta AJ890364.1 9 20081023 181082 Emiliania huxleyi virus 86 X87335.1 7 20050418 12104 Encephalomyocarditis virus AF356822.1 2 20050415 12104 Encephalomyocarditis virus strain BEL-2887A/91 DQ294633.1 3 20061114 12107 Mengo virus isolate Rz-pMwt KJ410351.1 2 20140501 1472717 Enhydra lutris papillomavirus 1 isolate 6898-13 DQ837641.1 1 20061222 64283 Entebbe bat virus strain UgIL-30 HQ728259.1 1 20110710 33757 Coxsackievirus A2 strain CVA2/SD/CHN/09 HQ728260.1 1 20110710 42785 Coxsackievirus A4 strain CVA4/SZ/CHN/09 HQ728261.1 1 20110710 42786 Coxsackievirus A5 strain CVA5/SD/CHN/09 AB678778.1 3 20120219 86107 Coxsackievirus A6 genomic RNA, strain: Shizuoka 18 KM609480.1 1 20150113 42788 Coxsackievirus A8 isolate CVA8/SZ39/CHN/2013 HQ728262.1 1 20110710 42769 Coxsackievirus A10 strain CVA10/SD/CHN/09 KF422142.1 2 20140924 42771 Coxsackievirus A12 strain QD-LXH535/SD/CHN/2009 KP036483.1 1 20141222 42773 Coxsackievirus A14 isolate PZ15G/JS/2012 U05876.1 5 20050418 31704 Coxsackievirus A16 G-10 AF352027.1 4 20050415 156647 Enterovirus 5666/sin/002209 AF316321.2 6 20050415 150846 Enterovirus 5865/sin/000009 U22521.1 5 20050417 39054 Enterovirus A71 JF905564.1 2 20110914 306588 Enterovirus A76 strain 04360/SD/CHN/2004/EV76 AY773285.1 1 20041103 297248 Enterovirus A90 isolate F950027 EF667344.1 2 20081216 469959 Enterovirus A92 strain RJG7 LK021688.1 2 20140625 1435148 Enterovirus A120 complete genome, strain MAD-2741-11 HQ456313.1 1 20110503 138948 Enterovirus A strain GZ2010-95 HQ400942.1 1 20110420 1006008 Human enterovirus 71 HZ08/Hangzhou/2008 EF667343.1 2 20081216 469958 Simian enterovirus 46 D00627.1 7 20071214 12067 Coxsackievirus A9 strain Griggs M16560.1 5 20050417 12071 Coxsackievirus B1 AF081485.1 2 20050415 82639 Coxsackievirus B2 strain Ohio M33854.1 7 19990630 12072 Coxsackievirus B3 AF311939.1 2 20050415 12073 Coxsackievirus B4 strain E2 X05690.1 6 20050418 12073 Coxsackievirus B4 X67706.1 4 20050418 12074 Coxsackievirus B5 AF039205.1 3 20050415 74561 Coxsackievirus B6 strain Schmitt X92886.1 9 20061114 103914 Echovirus 9 strain Barty X84981.1 9 20050418 103915 Echovirus 9 strain Hill AY302545.1 2 20050416 35294 Echovirus E2 strain Cornelis AY302553.1 2 20050416 47516 Echovirus E3 strain Morrisey AY302557.1 2 20050416 35295 Echovirus E4 strain Pesacek AF083069.1 2 20050415 40280 Echovirus E5 HM185056.1 3 20111115 12062 Echovirus E6 strain Echo6/Henan/127/2008 U16283.1 3 20050417 12062 Echovirus E6 AY302559.1 2 20050416 46018 Echovirus E7 strain Wallace AF524867.1 2 20050415 12060 Echovirus E9 isolate DM AJ577589.1 1 20040719 12078 Echovirus E11 isolate HUN-1108 X77708.1 28 20050418 35293 Echovirus E12, prototype Travis AY302539.1 2 20050416 47501 Echovirus E13 13 strain Del Carmen AY302540.1 2 20050416 47502 Echovirus E14 strain Tow AY302541.1 2 20050416 47503 Echovirus E15 strain CH 96-51 AY302542.1 2 20050416 47504 Echovirus E16 strain Harrington AY302543.1 2 20050416 47505 Echovirus E17 strain CHHE-29 HM777023.1 1 20101021 47506 Echovirus E18 isolate Kor05-ECV18-054cn AY302544.1 2 20050416 47507 Echovirus E19 strain Burke AY302546.1 2 20050416 47508 Echovirus E20 strain JV-1 AY302547.1 2 20050416 47509 Echovirus E21 strain Farina AY302548.1 2 20050416 47510 Echovirus E24 strain DeCamp AY302549.1 2 20050416 45101 Echovirus E25 strain JV-4 AY302550.1 2 20050416 47511 Echovirus E26 strain Coronel AY302551.1 2 20050416 45999 Echovirus E27 strain Bacon AY302552.1 2 20050416 47512 Echovirus E29 strain JV-10 AF162711.1 2 20050415 41846 Echovirus E30 strain Bastianni AF311938.1 2 20050415 41846 Echovirus E30 strain Bastianni AY302554.1 2 20050416 47513 Echovirus E31 strain Caldwell AY302555.1 2 20050416 47514 Echovirus E32 strain PR-10 AY302556.1 2 20050416 47515 Echovirus E33 strain Toluca-3 AY302560.1 2 20050416 171720 Enterovirus B69 strain Toluca-1 KF874626.1 1 20140918 200154 Enterovirus B73 isolate 088/SD/CHN/04 AY556057.1 1 20041025 222889 Enterovirus B74 strain USA/CA75-10213 AY556070.1 1 20041025 282345 Enterovirus B75 strain USA/OK85-10362 AY843302.1 3 20070817 222887 Enterovirus B77 strain USA/TX97-10394 AY843298.1 3 20110227 318563 Enterovirus B80 strain USA/CA67-10387 AY843299.1 3 20110227 318564 Enterovirus B81 strain USA/CA68-10389 AY843300.1 3 20110227 318565 Enterovirus B82 strain USA/CA64-10390 AY843301.1 3 20070817 318566 Enterovirus B83 strain USA/CA76-10392 DQ902712.1 1 20070831 318567 Enterovirus B84 isolate CIV2003-10603 AY843303.1 3 20070817 318568 Enterovirus B85 strain BAN00-10353 AY843304.1 3 20070817 318569 Enterovirus B86 strain BAN00-10354 AY843305.1 3 20070817 318570 Enterovirus B87 strain BAN01-10396 AY843306.1 3 20070817 318571 Enterovirus B88 strain BAN01-10398 AY843307.1 3 20070817 325446 Enterovirus B97 strain BAN99-10355 AB426611.1 3 20100325 325446 Enterovirus B97 strain DT94-0227 DQ902713.1 1 20070831 325447 Enterovirus B100 isolate BAN2000-10500 AY843308.1 3 20070817 408681 Enterovirus B101 strain CIV03-10361 KF990476.1 2 20140501 1248136 Enterovirus B106 isolate 148/YN/CHN/12 KF312882.1 1 20140326 1442164 Enterovirus B111 strain Q0011/XZ/CHN/2000 AF241359.1 2 20050415 152632 Enterovirus CA55-1988 AF230973.1 1 20000704 123738 Enterovirus Yanbian 96-83csf AY843297.1 3 20110227 318562 Human enterovirus 79 AY429470.1 3 20081229 12075 Swine vesicular disease virus strain HK'70 D00435.1 8 20050422 12076 Swine vesicular disease virus (STRAIN H/3 '76) JX174177.1 1 20120829 42779 Coxsackievirus A1 isolate KS-ZPH01F/XJ/CHN/2011 DQ995634.1 1 20090623 42770 Coxsackievirus A11 strain BAN01-10589 DQ995640.1 1 20090623 42772 Coxsackievirus A13 strain BAN99-10419 FM955278.1 1 20090523 42775 Coxsackievirus A17 isolate cCA17.67591 AB205396.1 3 20080621 42776 Coxsackievirus A18 strain CAM1972 DQ358078.1 1 20070111 42782 Coxsackievirus A20 serotype CAV20a DQ995647.1 1 20090623 42783 Coxsackievirus A22 strain ban99-10427 D90457.1 6 20071207 12089 Coxsackievirus A24 EF015886.1 1 20090623 325445 Enterovirus C96 strain BAN00-10488 KJ857508.1 1 20141022 1295563 Enterovirus C99 isolate YT31/SD/CHN/11 AB205395.1 4 20091211 138950 Enterovirus C strain Cambodia-02 D00538.1 9 20050422 12070 Human coxsackievirus A21 Coe EF555644.1 1 20090623 418905 Human enterovirus C99 EF555645.1 1 20090623 460162 Human enterovirus C102 JX982257.1 2 20140713 650039 Human enterovirus C104 strain Pavia261-9570 GQ865517.1 2 20100907 861519 Human enterovirus C109 isolate NICA08-4327 JX262382.1 1 20120914 1230646 Human enterovirus C117 strain LIT22 JX961709.1 2 20130313 1247477 Human enterovirus C118 strain ISR38 AY876913.1 2 20050417 310756 Human enterovirus Hangzhou13-02 AY876912.1 2 20050417 310755 Human enterovirus Ningbo3-02 AJ132961.1 3 20050415 12080 Human poliovirus 1 V01149.1 6 20030210 12081 Human poliovirus 1 Mahoney M12197.1 9 20060803 12083 Human poliovirus 2 X00925.1 5 19961022 12086 Human poliovirus 3 AY426531.1 1 20040820 42789 Enterovirus D68 strain Fermon D00820.1 6 20090219 12090 Human enterovirus 70 EF107097.1 2 20070228 318572 Human enterovirus 94 AF123432.1 3 20050415 106607 Bovine enterovirus strain K2577 AF123433.1 3 20050415 106608 Bovine enterovirus strain SL305 KM667941.1 1 20150113 12064 Enterovirus E isolate BEV/Egypt/2014 AY508697.1 2 20041022 269638 Bovine enterovirus type 2 strain 3A KC748420.1 1 20130825 1330520 Enterovirus F strain IL/alpaca AY462106.1 2 20061223 263531 Possum enterovirus W1 AY462107.1 2 20061223 263532 Possum enterovirus W6 JQ818253.1 1 20120903 106966 Enterovirus G isolate PEV-B-KOR JQ277724.1 2 20120822 1194444 Ovine enterovirus strain ovine/TB4-OEV/2009/HUN HQ702854.1 2 20110720 1028489 Porcine enterovirus 3H strain swine/K23/2008/HUN Y14459.1 7 20061114 64141 Porcine enterovirus 9 FJ007373.1 2 20130508 1330521 Enterovirus J strain POo-1 KJ420747.1 1 20140507 47681 Enterovirus sp. isolate GR_2815/07 HM104174.1 1 20100627 239365 Enzootic nasal tumour virus of goats JN408834.1 1 20121019 166056 Epinotia aporema granulovirus AY043265.1 3 20070809 70600 Epiphyas postvittana nucleopolyhedrovirus FJ433873.1 1 20100308 100217 Epizootic haematopoietic necrosis virus AM745007.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 1 AM745008.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 2 AM745009.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 3 AM745010.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 4 AM745011.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 5 AM745012.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 6 AM745013.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 7 AM745014.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 8 AM745015.1 3 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 9 AM745016.1 2 20150307 449135 Epizootic hemorrhagic disease virus (serotype 1 / strain IbAr22619) segment 10 AM744977.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 1 AM744978.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 2 AM744979.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 3 AM744980.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 4 AM744981.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 5 AM744982.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 6 AM744983.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 7 AM744984.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 8 AM744985.1 3 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 9 AM744986.1 2 20150307 449133 Epizootic hemorrhagic disease virus (serotype 1 / strain New Jersey) segment 10 AM744987.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 1 AM744988.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 2 AM744989.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 3 AM744990.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 4 AM744991.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 5 AM744992.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 6 AM744993.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 7 AM744994.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 8 AM744995.1 3 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 9 AM744996.1 2 20150307 449134 Epizootic hemorrhagic disease virus (serotype 2 / strain 439) segment 10 AM744997.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 1 AM744998.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 2 AM744999.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 3 AM745000.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 4 AM745001.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 5 AM745002.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 6 AM745003.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 7 AM745004.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 8 AM745005.1 3 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 9 AM745006.1 2 20150307 10910 Epizootic hemorrhagic disease virus (serotype 2 / strain Alberta) segment 10 AM745077.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 1 AM745078.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 2 AM745079.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 3 AM745080.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 4 AM745081.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 5 AM745082.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 6 AM745083.1 2 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 7 AM745084.1 1 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 8 AM745085.1 1 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 9 AM745086.1 1 20091006 449142 Epizootic hemorrhagic disease virus (serotype 2 / strain Ibaraki) segment 10 AM745017.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 1 AM745018.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 2 AM745019.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 3 AM745020.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 4 AM745021.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 5 AM745022.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 6 AM745023.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 7 AM745024.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 8 AM745025.1 3 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 9 AM745026.1 2 20150307 449136 Epizootic hemorrhagic disease virus (serotype 4 / strain IbAr 33853) segment 10 AM745027.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 1 AM745028.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 2 AM745029.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 3 AM745030.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 4 AM745031.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 5 AM745032.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 6 AM745033.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 7 AM745034.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 8 AM745035.1 3 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 9 AM745036.1 2 20150307 449137 Epizootic hemorrhagic disease virus (serotype 5 / strain CSIRO 157) segment 10 AM745067.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 1 AM745068.1 2 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 2 AM745069.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 3 AM745070.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 4 AM745071.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 5 AM745072.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 6 AM745073.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 7 AM745074.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 8 AM745075.1 3 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 9 AM745076.1 2 20150307 449141 Epizootic hemorrhagic disease virus (serotype 6 / strain 318) segment 10 AM745037.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 1 AM745038.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 2 AM745039.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 3 AM745040.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 4 AM745041.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 5 AM745042.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 6 AM745043.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 7 AM745044.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 8 AM745045.1 3 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 9 AM745046.1 2 20150307 449138 Epizootic hemorrhagic disease virus (serotype 6 / strain CSIRO 753) segment 10 AM745047.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 1 AM745048.1 2 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 2 AM745049.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 3 AM745050.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 4 AM745051.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 5 AM745052.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 6 AM745053.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 7 AM745054.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 8 AM745055.1 3 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 9 AM745056.1 2 20150307 449139 Epizootic hemorrhagic disease virus (serotype 7 / strain CSIRO 775) segment 10 AM745057.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 1 AM745058.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 2 AM745059.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 3 AM745060.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 4 AM745061.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 5 AM745062.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 6 AM745063.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 7 AM745064.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 8 AM745065.1 3 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 9 AM745066.1 2 20150307 449140 Epizootic hemorrhagic disease virus (serotype 8 / strain CPR 3961A) segment 10 DQ098913.1 1 20070708 374077 Bovine papillomavirus 8 DQ098917.1 1 20070708 374078 Bovine papillomavirus type 8-EB AJ620206.1 2 20050415 40537 Epsilonpapillomavirus 1 KC858263.1 1 20140311 1464071 Eptesicus serotinus papillomavirus type 1 KC858264.1 1 20140311 1464072 Eptesicus serotinus papillomavirus type 2 KC858265.1 1 20140311 1464073 Eptesicus serotinus papillomavirus type 3 AY665713.1 5 20061114 10326 Equid herpesvirus 1 U20824.2 9 20150202 12657 Equid herpesvirus 2 AF030027.1 6 20050415 10331 Equid herpesvirus 4 KM924295.1 3 20150326 10371 Equid herpesvirus 5 strain 2-141/67 JQ343919.1 1 20120425 39637 Equid herpesvirus 8 strain wh AP010838.1 3 20090407 55744 Equid herpesvirus 9 X53459.3 13 20010625 11047 Equine arteritis virus AF201902.1 2 20050415 109270 Equine foamy virus KP325401.1 2 20150314 1605403 Non-primate hepacivirus NZP1 AF016316.1 2 20050415 11665 Equine infectious anemia virus JN418926.1 2 20120207 46916 Equine adenovirus 1 strain M1 EU503122.1 1 20090303 526413 Equine papillomavirus 2 JQ965698.1 2 20130524 1235427 Equine papillomavirus type 6 KC410872.1 2 20130606 1307803 Equine Pegivirus 1 isolate C0035 JQ412134.1 2 20120802 1191100 Equine polyomavirus isolate CU03 DQ272128.1 3 20061208 47000 Equine rhinitis A virus strain U188 AF361253.1 3 20050415 168014 Equine rhinitis B virus 2 KF741371.1 3 20140507 1457996 Equus asinus papillomavirus AA-2014 isolate Asinara JQ031032.1 3 20130524 1235428 Equus ferus caballus papillomavirus type 4 JQ031033.1 3 20130524 1235429 Equus ferus caballus papillomavirus type 5 JX035935.1 2 20130524 1235430 Equus ferus caballus papillomavirus type 7 FJ665632.1 1 20090422 638358 Eragrostis curvula streak virus JF508490.1 1 20110517 1030595 Eragrostis minor streak virus EU244915.1 2 20080301 496807 Eragrostis streak virus KJ406702.1 1 20141014 307444 Erinnyis ello granulovirus AF098523.1 3 20000314 12152 Erysimum latent virus KJ918748.1 1 20140902 1538549 Ethiopian tobacco bushy top virus isolate 18-2 EU569831.1 1 20080409 515444 Eupatorium vein clearing virus AB300464.1 4 20100603 221054 Eupatorium yellow vein betasatellite AB007990.1 3 20050414 186637 Eupatorium yellow vein virus AB433979.1 2 20090130 519350 Eupatorium yellow vein virus-[Japan:Kagawa:Tomato:1997] AB300463.1 5 20100603 436246 Eupatorium yellow vein virus-[Suya] HF921477.1 2 20130923 1306546 Euphorbia caput-medusae latent virus, isolate Lap11 AM411424.1 1 20070108 412688 Euphorbia leaf curl Guangxi virus isolate G35-1 KC161185.1 2 20141127 270117 Euphorbia leaf curl virus isolate PF1 AM886131.1 2 20080408 471180 Euphorbia mosaic virus Peru DNA-A FN436008.1 2 20150115 598494 Euphorbia yellow mosaic virus associated DNA 1 isolate Brazil:Mato grosso do sul:1:2007 FN435995.1 3 20150307 598494 Euphorbia yellow mosaic virus isolate Brazil:Mato grosso do sul:1:2007 FN435996.1 3 20150307 598494 Euphorbia yellow mosaic virus segment DNA B isolate Brazil:Mato grosso do sul:1:2007 FJ227128.1 1 20090428 307467 Euproctis pseudoconspersa nucleopolyhedrovirus AF461742.1 2 20100208 186165 Euprosterna elaeasa virus EF157976.1 1 20070406 57482 European bat lyssavirus 1 isolate RV9 EF157977.2 2 20150227 57483 European bat lyssavirus 2 isolate RV1333 Z69620.1 5 20050418 33756 European brown hare syndrome virus JQ724856.1 1 20120517 84739 European catfish virus AJ132185.1 3 20140331 1453082 Faba bean necrotic yellows C7 alphasatellite isolate Egyptian EV1-93 AJ132187.1 3 20140331 1453083 Faba bean necrotic yellows C9 alphasatellite C9-Eg gene, isolate Egyptian EV1-93 AJ005968.1 3 20140331 1453081 Faba bean necrotic yellows C11 alphasatellite AJ132180.1 2 20000916 59817 Faba bean necrotic yellows virus DNA 2 AJ132181.1 3 20021223 59817 Faba bean necrotic yellows virus DNA 3 AJ132182.1 2 20000916 59817 Faba bean necrotic yellows virus DNA 4 AJ132183.1 2 20000916 59817 Faba bean necrotic yellows virus DNA 5 AJ132184.1 3 20021223 59817 Faba bean necrotic yellows virus DNA 6 AJ132186.1 3 20021223 59817 Faba bean necrotic yellows virus DNA 8 AJ132179.1 2 20000916 59817 Faba bean necrotic yellows virus DNA 10 HE654127.1 2 20130628 1137801 Faba bean yellow leaf virus NSP gene for nuclear shuttle protein, segment DNA-N, isolate Eth-231 KF371643.1 4 20141002 1391028 Faecal-associated gemycircularvirus 1a isolate as41 KF371642.1 4 20141002 1391029 Faecal-associated gemycircularvirus 1b isolate P22 KF371641.1 4 20141002 1391030 Faecal-associated gemycircularvirus 1c isolate P9 KF371640.1 4 20141002 1391031 Faecal-associated gemycircularvirus 2 isolate as5 KF371639.1 4 20141002 1391032 Faecal-associated gemycircularvirus 3 isolate P24c KF371638.1 4 20141002 1391033 Faecal-associated gemycircularvirus 4 isolate as50 KF371637.1 4 20141002 1391034 Faecal-associated gemycircularvirus 5 isolate P24b KF371636.1 4 20141002 1391035 Faecal-associated gemycircularvirus 6 isolate P24a KF371635.1 4 20141002 1391036 Faecal-associated gemycircularvirus 7 isolate as24 KF371634.1 4 20141002 1391037 Faecal-associated gemycircularvirus 8 isolate P21 KF371633.1 4 20141002 1391038 Faecal-associated gemycircularvirus 9 isolate P22 KF371632.1 4 20141002 1391025 Faecal-associated gemycircularvirus 10 isolate P14 KF371631.1 4 20141002 1391026 Faecal-associated gemycircularvirus 11 isolate as35 KF371630.1 4 20141002 1391027 Faecal-associated gemycircularvirus 12 isolate as3 KJ668231.1 1 20140625 1510155 Falconid herpesvirus 1 strain S-18 KP230449.1 1 20150421 1641896 Falcovirus A1 strain kestrel/VOVE0622/2013/HUN KC441518.1 1 20130811 1380894 Farfantepenaeus duorarum circovirus isolate FL2009 HM627182.1 1 20120503 1027468 Farmington virus KF874490.1 1 20140310 1401263 Fathead minnow picornavirus isolate 20 FJ478159.2 3 20100509 10334 Felid herpesvirus 1 strain C-27 KF499111.1 2 20131028 1389204 Feline astrovirus 2 strain 1637F KF374704.1 2 20140516 1413815 Feline astrovirus Viseu KF792837.1 1 20131114 1417756 Feline bocavirus 2 isolate POR1 M86379.1 5 20050417 11978 Feline calicivirus AF109465.1 2 20050415 11978 Feline calicivirus strain F65 KM017740.1 2 20141122 1530454 Feline cyclovirus Y08851.1 7 20060619 53182 Feline foamy virus M25381.1 8 20061114 11673 Feline immunodeficiency virus AF052723.1 2 20050415 11768 Feline leukemia virus X00255.1 5 20050418 11772 Feline sarcoma virus JQ411016.1 1 20120417 1170234 Feline morbillivirus strain M252A JN572118.1 2 20111215 1108810 Feline picornavirus strain 661F KF387721.1 2 20140516 1416021 Feline sakobuvirus A isolate FFUP1 KF147892.1 2 20140417 1398507 Felis catus papillomavirus 4 isolate MY-3 KJ956407.1 2 20141004 1529450 Anaconda paramyxovirus isolate RF111111 KF006988.1 1 20130904 1394141 Ferret papillomavirus isolate MpPV1 JF411989.1 2 20120725 1034096 Fig badnavirus 1 isolate Arkansas 1 FR687855.1 2 20110621 882768 Fig cryptic virus segment 2 X06166.1 10 20050418 10649 Figwort mosaic virus KC676792.1 2 20131105 1408144 Fikirini bat rhabdovirus isolate KEN352 DQ845075.1 2 20070805 400122 Finch circovirus DQ192571.1 1 20060320 349564 Finch polyomavirus KM434233.1 2 20150219 1574287 Fisavirus 1 strain HAL1 JX431885.1 1 20131002 200400 Flanders virus strain M11750 M91671.1 4 20050417 11093 Flavivirus sp. EU627611.1 2 20080815 45220 Flexal virus segment L AF512831.1 5 20080913 45220 Flexal virus segment S JX569794.1 3 20130604 1286619 Florida woods cockroach-associated cyclovirus isolate PBCyV GS140 AY593765.1 2 20050429 12111 Foot-and-mouth disease virus - type A AY593796.1 2 20050429 110195 Foot-and-mouth disease virus - type Asia 1 AF274010.1 2 20050415 12116 Foot-and-mouth disease virus - type C AJ320488.1 3 20050415 12118 Foot-and-mouth disease virus - type O AY593840.1 2 20050429 12122 Foot-and-mouth disease virus - type SAT 1 AY593847.1 2 20050429 35292 Foot-and-mouth disease virus - type SAT 2 AY593851.1 2 20050429 12123 Foot-and-mouth disease virus - type SAT 3 AY593805.1 2 20050429 12121 Foot-and-mouth disease virus C1 AY593806.1 2 20050429 46290 Foot-and-mouth disease virus C3 AY593808.1 2 20050429 46291 Foot-and-mouth disease virus C4 AY593809.1 2 20050429 46292 Foot-and-mouth disease virus C5 AY686687.1 2 20100826 290057 Foot-and-mouth disease virus O/ES/2001 isolate O/ES/2001 EF552688.1 1 20080309 461287 Foot-and-mouth disease virus O/UKG/3952/2001 EF552693.1 1 20080309 461292 Foot-and-mouth disease virus O/UKG/4014/2001 EF552689.1 1 20080309 461288 Foot-and-mouth disease virus O/UKG/4141/2001 EF552694.1 1 20080309 461293 Foot-and-mouth disease virus O/UKG/4998/2001 EF552696.1 1 20080309 461295 Foot-and-mouth disease virus O/UKG/5470/2001 EF552697.1 1 20080309 461296 Foot-and-mouth disease virus O/UKG/5681/2001 EF552690.1 1 20080309 461289 Foot-and-mouth disease virus O/UKG/7039/2001 EF552692.1 1 20080309 461291 Foot-and-mouth disease virus O/UKG/7299/2001 EF552691.1 1 20080309 461290 Foot-and-mouth disease virus O/UKG/9161/2001 EF552695.1 1 20080309 461294 Foot-and-mouth disease virus O/UKG/9443/2001 KF500001.1 1 20131212 1432856 Formica exsecta virus 1 isolate Fex1 KF500002.1 1 20131212 1432857 Formica exsecta virus 2 isolate Fex2 HM147986.1 1 20120227 48541 Buggy Creek virus GQ281603.1 1 20091125 48544 Fort Morgan virus isolate CM4-146 U46933.1 5 20050417 10553 Fowl adenovirus 1 KC493646.1 2 20130818 172861 Fowl adenovirus 5 strain 340 KM096544.1 3 20150429 190063 Fowl aviadenovirus C isolate JSJ13 GU188428.1 2 20110527 190063 Fowl aviadenovirus C isolate ON1 AF083975.2 5 20050415 172864 Fowl adenovirus 9 KM096546.1 2 20150402 190064 Fowl aviadenovirus D GU734104.1 2 20110316 190065 Fowl aviadenovirus E isolate HG AF198100.1 3 20050415 10261 Fowlpox virus M62730.1 3 20000304 12179 Foxtail mosaic virus JN555602.2 3 20140102 99585 Frangipani mosaic virus strain Fr-Ind-1 FM206346.1 4 20100615 421012 Freesia mosaic virus JX094281.1 1 20120813 1218727 French bean severe leaf curl virus isolate FbSLCV-2 AM039800.1 1 20060308 332471 Fritillary virus Y isolate Pan'an AF224336.1 4 20050415 114102 Frog adenovirus 1 KC865735.1 2 20131101 1398177 Andrias davidianus ranavirus isolate 1201 KF512820.1 2 20140725 1213990 Chinese giant salamander iridovirus isolate CGSIV-HN1104 JQ231222.1 2 20120320 540070 Common midwife toad ranavirus isolate Mesotriton alpestris/2008/E AY548484.1 4 20061114 10493 Frog virus 3 JQ654586.1 3 20120809 380178 Rana grylio iridovirus EU627010.1 2 20090517 365144 Soft-shelled turtle iridovirus AF389451.1 6 20051208 160691 Tiger frog virus AB825953.1 1 20140613 1343901 Fruit bat alphaherpesvirus 1 AF033810.1 4 20050415 11885 Fujinami sarcoma virus KJ452243.1 1 20140604 1463817 Fulmarus glacialis papillomavirus 1 KF246569.1 2 20130815 1353241 Fur seal faeces associated circular DNA virus isolate as50 FJ768020.1 1 20100302 676234 Furcraea necrotic streak virus AY533037.2 3 20090618 194397 Fusarium graminearum dsRNA mycovirus-1 GQ140626.1 1 20091107 687917 Fusarium graminearum dsRNA mycovirus-3 KC330231.1 3 20130505 1284208 Fusarium graminearum hypovirus 1 isolate HN10 KP208178.1 1 20150416 1640379 Fusarium graminearum hypovirus 2 isolate FgHV2/JS16 KJ415259.1 1 20140403 1468172 Gaillardia latent virus isolate 5/18-05-2010 Y13463.1 5 20050418 60714 Galinsoga mosaic virus HQ630064.1 1 20110426 10386 Gallid herpesvirus 1 strain live attenuated Serva AF147806.2 5 20061114 10390 Gallid herpesvirus 2 AY510475.1 5 20061114 10390 Gallid herpesvirus 2 DQ530348.1 3 20070324 10390 Gallid herpesvirus 2 strain CVI988 JF742597.1 2 20120224 1123959 Gallid herpesvirus 2 strain 814 AB049735.1 3 20101121 35250 Gallid herpesvirus 3 AB024414.1 2 20050414 36353 Marek's disease virus serotype 2 MDV2 KJ486491.1 1 20150106 1136878 Chicken parvovirus isolate ADL120686 GU214704.1 1 20100308 717641 Chicken parvovirus ABU-P1 KM598414.1 1 20150402 1633569 Gallus gallus enteric parvovirus isolate ChPV 367 GU214706.1 1 20100308 740934 Turkey parvovirus 260 JQ691613.1 2 20120927 1214230 Turkey gallivirus strain turkey/M176/2011/HUN DQ280312.2 3 20080604 9031 Gallus gallus MLV-related endogenous retrovirus X70827.1 3 20050418 10617 Human papillomavirus type 4 X70829.1 3 20050418 28312 Human papillomavirus type 65 U31789.1 3 20050417 40538 Human papillomavirus type 48 U31790.1 3 20050417 40539 Human papillomavirus type 50 U31792.1 3 20050417 40540 Human papillomavirus type 60 EF467176.1 1 20071116 337054 Human papillomavirus type 88 DQ080081.1 2 20070330 915425 Human papillomavirus type 101 DQ080078.1 2 20070330 338323 Human papillomavirus type 103 FM212639.1 2 20090316 565537 Human papillomavirus type 108 EU541441.1 2 20100301 915426 Human papillomavirus type 109 GQ845445.1 1 20100527 765055 Human papillomavirus type 123 HM999990.1 1 20120731 1070411 Human papillomavirus type 138 isolate GH13 HM999991.1 1 20120731 1070412 Human papillomavirus type 139 isolate GH1646 GU117629.1 2 20110623 909328 Human papillomavirus type 149 EU541442.1 2 20100301 915427 Human papillomavirus type 112 GQ845441.1 1 20100527 765051 Human papillomavirus type 119 HM999999.1 1 20120731 1070420 Human papillomavirus type 147 isolate GH659 GQ845443.1 1 20100527 915429 Human papillomavirus type 121 GU117630.1 2 20110623 909329 Human papillomavirus type 130 GU117633.1 2 20110623 909332 Human papillomavirus type 133 HM999994.1 1 20120731 1070415 Human papillomavirus type 142 isolate GH1302 AB646346.1 3 20111130 1055684 Human papillomavirus type 126 HM011570.1 1 20100907 746832 Human papillomavirus type 127 isolate R3a GU225708.1 2 20110623 931209 Human papillomavirus type 128 GU117631.1 2 20110623 909330 Human papillomavirus type 131 HM999987.1 1 20120603 1070408 Human papillomavirus type 135 isolate NJ3500 HM999998.1 1 20120731 1070419 Human papillomavirus type 146 isolate GH1677 HM999989.1 1 20120603 1070410 Human papillomavirus type 137 isolate NJ2801H HM999996.1 1 20120603 1070417 Human papillomavirus type 144 isolate CL3740 JX429973.1 3 20130305 1248396 Human papillomavirus type 156 isolate GC01 JX413107.1 2 20130405 1315262 Human papillomavirus type 163 isolate KC3 JF320810.1 2 20120224 47900 Garlic common latent virus isolate WA-1 AB010300.1 8 20081229 12433 Garlic virus A AB010302.1 6 20081229 12431 Garlic virus C KF550407.1 2 20140515 12430 Garlic virus D isolate GarVD-SW9 U89243.1 5 20020208 150284 Garlic virus X KC172652.1 2 20130424 1296573 Gastropod associated circular ssDNA virus strain chc D90600.1 7 20050417 54290 GB virus C/Hepatitis G virus isolate GT110 U45966.1 8 20050417 54290 GB virus C/Hepatitis G virus isolate R10291 AF070476.1 2 20050415 93986 GB virus C variant troglodytes KP133078.1 1 20150416 1588761 Gemycircularvirus BZ1 KP133079.1 1 20150416 1588762 Gemycircularvirus BZ2 KP133080.1 1 20150416 1588763 Gemycircularvirus NP KP133075.1 1 20150416 1588764 Gemycircularvirus SL1 KP133076.1 1 20150416 1588765 Gemycircularvirus SL2 KP133077.1 1 20150416 1588766 Gemycircularvirus SL3 AB698918.1 2 20130327 1150353 Gentian Kobu-sho-associated virus RNA isolate: Nishiwaga KP266742.1 2 20150320 1620702 German gecko ranavirus isolate 2000/99 AY702913.1 1 20040930 59300 Getah virus from South Korea KP264963.1 1 20150122 1595996 Giant guitarfish polyomavirus 1 isolate UGA1 DQ238861.1 3 20090913 353633 Giardia canis virus L13218.1 7 20000304 29255 Giardia lamblia virus M26927.1 5 20061114 11840 Gibbon ape leukemia virus U60065.1 4 20050418 11840 Gibbon ape leukemia virus strain X EU487200.1 1 20080708 96029 Yellow head virus EF568108.1 2 20080420 379529 Glossina pallidipes salivary gland hypertrophy virus EU001259.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 1 EU001260.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 2 EU001261.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 3 EU001262.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 4 EU001263.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 5 EU001264.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 6 EU001265.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 7 EU001266.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 9 EU001267.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 10 EU001268.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 11 EU001269.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 12 EU001270.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 13 EU001271.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 14 EU001272.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 15 EU001273.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 17 EU001274.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 18 EU001275.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 19 EU001276.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 20 EU001277.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 21 EU001278.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 22 EU001279.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 23 EU001280.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 24 EU001281.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 26 EU001282.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 27 EU001283.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 28 EU001284.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 29 EU001285.1 1 20081229 451706 Glyptapanteles flavicoxis bracovirus segment 31 JF510462.1 3 20121024 1193422 Goose adenovirus 4 strain P29 KJ473715.1 2 20140924 1493858 Goose calicivirus strain N AJ304456.1 1 20010807 146032 Goose circovirus HQ681902.1 2 20110819 208491 Goose hemorrhagic polyomavirus isolate Toulouse Goose 2008 HQ852250.1 2 20110817 157270 Gooseberry vein banding associated virus isolate BC HQ385752.1 2 20101230 928214 Gorilla gorilla gorilla polyomavirus 1 isolate 5766 KP233191.1 1 20150131 1603068 Gorilla smacovirus isolate SF3 KM070823.1 1 20140805 1428341 Cotton leaf curl alphasatellite isolate IARI-45 KF588035.1 3 20141120 1560351 Goutanap virus strain F33 KJ534082.1 1 20140513 208084 Grapevine Algerian latent virus FN691935.1 3 20110503 748667 Grapevine Bulgarian latent virus segment 2, isolate Serb1 JX678977.1 1 20121111 1249676 Grapevine endophyte endornavirus D00442.1 5 20030707 141860 Grapevine fanleaf virus satellite RNA AJ309022.1 3 20050415 103722 Grapevine fleck virus KC427995.1 1 20130911 1395525 Grapevine redleaf-associated virus isolate GiGV-WA-MR JQ023131.1 1 20111221 47985 Grapevine leafroll-associated virus 1 isolate 1050 AY881628.1 1 20050801 64003 Grapevine leafroll-associated virus 2 isolate 93/955 EU344893.1 2 20080722 55951 Grapevine leafroll-associated virus 3 JX266782.1 2 20121203 1263294 Grapevine leafroll-associated virus 3m isolate 139 FJ467503.1 2 20120216 70177 Grapevine leafroll-associated virus 4 isolate LR106 JX559639.1 1 20121107 71032 Grapevine leafroll-associated virus 5 isolate 3138-03 FJ467504.1 2 20120216 203168 Grapevine leafroll-associated virus 6 isolate Estellat HE588185.1 3 20111014 217615 Grapevine leafroll-associated virus 7 isolate AA42 FR877530.1 2 20120216 1051792 Grapevine Pinot gris virus KC896623.1 2 20141001 1381007 Grapevine red-blotch associated virus isolate CF214-1 JQ901105.2 4 20140501 1381007 Grapevine red-blotch associated virus isolate JRT[456]17NOV10 JX559646.1 1 20121107 68893 Grapevine Rupestris stem pitting virus isolate 3138-07 AF026278.1 3 20000303 196400 Grapevine rupestris stem pitting-associated virus AF057136.1 2 20001111 81832 Grapevine rupestris stem pitting-associated virus 1 JF301669.2 2 20110830 1050407 Grapevine vein-clearing virus isolate LBC0903 X75433.2 14 20060203 35288 Grapevine virus A X75448.1 28 20060203 35289 Grapevine virus B AB432910.1 3 20090127 516956 Grapevine virus E JX105428.1 1 20120821 1221437 Grapevine virus F isolate AUD46129 KC113518.1 1 20130205 1288359 Grass carp rhabdovirus V76 AY615209.1 2 20050428 279538 Gremmeniella abietina mitochondrial RNA virus S2 AY615210.1 2 20050428 279539 Gremmeniella abietina RNA virus L2 DQ399289.1 2 20090812 374005 Gremmeniella abietina type B RNA virus XL1 DQ399290.1 2 20090812 374006 Gremmeniella abietina type B RNA virus XL2 U29144.1 4 20000304 41952 Arctic ground squirrel hepatitis B virus K02715.1 3 20000304 10406 Ground squirrel hepatitis virus AF025538.1 2 20001017 40687 Peanut bud necrosis virus segment L U42555.1 4 20071101 40687 Peanut bud necrosis virus segment M U27809.1 4 20071212 40687 Peanut bud necrosis virus segment S Z69910.1 4 19960930 47740 Groundnut rosette virus AF202870.1 1 20000613 127441 Groundnut rosette virus satellite RNA EF203088.1 4 20070615 432587 Gryllus bimaculatus nudivirus AY358024.2 2 20030829 45219 Guanarito virus segment L AY129247.1 2 20030529 45219 Guanarito virus segment S DQ845074.1 2 20070805 400121 Gull circovirus JX310702.1 2 20121102 1214955 Gyrovirus 4 strain D137 JQ308210.1 2 20120520 1163715 Gyrovirus GyV3 KM111536.1 1 20141001 1548711 Gyrovirus GyV7-SF KF294861.1 1 20131111 1415627 Gyrovirus Tu243 KF294862.1 1 20131111 1415628 Gyrovirus Tu789 AB818538.1 2 20140218 1324128 Habenaria mosaic virus genomic RNA, isolate: Ha-1 JN000306.1 3 20120102 1088890 Halastavi arva RNA virus GU321093.1 1 20100127 710112 Haloarcula hispanica pleomorphic virus 1 FJ685651.1 2 20090510 634168 Halorubrum pleomorphic virus 1 KF699344.1 2 20140102 1410467 Halyomorpha halys virus isolate Beltsville X02449.1 10 20050418 10626 Hamster polyomavirus JQ957872.1 2 20130512 1286140 Hana virus strain A4/CI/2004 X55901.1 11 20061114 11599 Hantaan virus segment L M14627.1 4 20061114 11599 Hantaan virus segment M M14626.1 2 20000304 11599 Hantaan virus segment S AF184987.1 1 19991007 93830 Hantavirus Z10 segement S AF189155.1 1 19991028 93830 Hantavirus Z10 segment L AF276987.1 2 20030529 93830 Hantavirus Z10 segment M HQ161081.1 3 20110629 409486 Hardenbergia mosaic virus isolate HarMV-57.2 HQ241409.1 3 20110812 1003891 Hardenbergia virus A isolate HarVA-57 KJ679438.1 4 20140522 1487185 Heliconius erato iflavirus EU255577.1 2 20080508 489830 Helicoverpa armigera granulovirus EU730893.1 1 20081216 559170 Helicoverpa armigera multiple nucleopolyhedrovirus AP010907.1 2 20091130 566972 Helicoverpa armigera NPV NNg1 AF303045.2 5 20050415 51313 Helicoverpa armigera nucleopolyhedrovirus AF271059.2 4 20071107 148363 Helicoverpa armigera nucleopolyhedrovirus G4 U18246.1 2 19981231 37206 Helicoverpa armigera stunt virus RNA1 L37299.1 5 20000304 37206 Helicoverpa armigera stunt virus RNA2 AF334030.1 3 20050415 10468 Helicoverpa zea single nucleopolyhedrovirus EF133465.1 2 20070517 260797 Heliothis virescens ascovirus 3e JX491653.1 1 20121031 1246651 Heliothis virescens ascovirus 3g JN418988.1 2 20120306 1128424 Helicoverpa zea nudivirus 2 AF451898.1 2 20050415 29250 Heliothis zea nudivirus FJ196836.1 2 20110810 592206 Helleborus net necrosis virus U41345.2 2 20070206 45237 Helminthosporium victoriae virus 190S KF158713.1 2 20131030 1367203 Hemileuca sp. nucleopolyhedrovirus AF017149.3 8 20130808 63330 Hendra virus M14707.1 4 20000304 12092 Hepatitis A virus EU140838.1 2 20110522 12101 Simian hepatitis A virus HE974370.1 2 20130801 489450 HBV genotype A1, isolate Mart-B27 HE974375.1 2 20130801 489450 HBV genotype A1, isolate Mart-B43 HE974381.1 2 20130801 489450 HBV genotype A1, isolate Mart-B64 HE974364.1 2 20130801 489451 HBV genotype A2, isolate Mart-B15 HE974367.1 2 20130801 489451 HBV genotype A2, isolate Mart-B22 HE974371.1 2 20130801 489451 HBV genotype A2, isolate Mart-B34 HE974374.1 2 20130801 489451 HBV genotype A2, isolate Mart-B42 HE974376.1 2 20130801 489451 HBV genotype A2, isolate Mart-B45 HE974383.1 2 20130801 489451 HBV genotype A2, isolate Mart-B74 AB540582.1 1 20100509 489460 HBV genotype B AB981581.1 1 20150402 489460 HBV genotype B DNA isolate: P2-120831 AB981582.1 1 20150402 489460 HBV genotype B DNA isolate: P2-121210 AB981583.1 1 20150402 489460 HBV genotype B DNA isolate: P2-121214 AB819611.1 1 20140604 489460 HBV genotype B DNA isolate: pBS-HBVB1_1005425-1.3G_mu-mu AB819612.1 1 20140604 489460 HBV genotype B DNA isolate: pBS-HBVB1_1005425-1.3G_mu-wt AB819613.1 1 20140604 489460 HBV genotype B DNA isolate: pBS-HBVB1_1005425-1.3G_wt-mu AB819614.1 1 20140604 489460 HBV genotype B DNA isolate: pBS-HBVB1_1005425-1.3G_wt-wt AB540583.1 1 20100509 489466 HBV genotype C AB560662.1 3 20110110 489466 HBV genotype C DNA isolate: 60PU AB560661.1 3 20110110 489466 HBV genotype C DNA isolate: 58PU AB981580.1 1 20150402 489466 HBV genotype C DNA isolate: P1-090725 AB819615.1 1 20140604 489466 HBV genotype C DNA isolate: pBS-HBVC2_0500005-1.3G_mu-mu AB819616.1 1 20140604 489466 HBV genotype C DNA isolate: pBS-HBVC2_0500005-1.3G_mu-wt AB819617.1 1 20140604 489466 HBV genotype C DNA isolate: pBS-HBVC2_0500005-1.3G_wt-mu AB819618.1 1 20140604 489466 HBV genotype C DNA isolate: pBS-HBVC2_0500005-1.3G_wt-wt AB554025.1 1 20101229 489466 HBV genotype C DNA, isolate: MRK89073 AB554021.1 1 20101229 489466 HBV genotype C DNA, isolate: GRS08298 AB644281.1 2 20120217 489466 HBV genotype C DNA, isolate: NAB9 AB644283.1 2 20120217 489466 HBV genotype C DNA, isolate: NAB28 AB644284.1 2 20120217 489466 HBV genotype C DNA, isolate: NAB32 AB644286.1 2 20120217 489466 HBV genotype C DNA, isolate: NAB47 AB644287.1 2 20120217 489466 HBV genotype C DNA, isolate: NAB52 AB554018.1 1 20101229 489466 HBV genotype C DNA, isolate: NMB09075 AB554019.1 1 20101229 489466 HBV genotype C DNA, isolate: NMB09122 AB554020.1 1 20101229 489466 HBV genotype C DNA, isolate: NMB09124 AB554014.1 1 20101229 489466 HBV genotype C DNA, isolate: TRF08029 AB554015.1 1 20101229 489466 HBV genotype C DNA, isolate: TRF08111 HE974377.1 2 20130801 1219353 HBV genotype D3, isolate Mart-B47 HE974379.1 2 20130801 1219353 HBV genotype D3, isolate Mart-B58 HE974372.1 2 20130801 1219352 HBV genotype D4, isolate Mart-B36 HE974373.1 2 20130801 1219352 HBV genotype D4, isolate Mart-B37 HE974378.1 2 20130801 1219352 HBV genotype D4, isolate Mart-B50 HE974382.1 2 20130801 1219352 HBV genotype D4, isolate Mart-B70 AB554023.1 1 20101229 489483 HBV genotype D DNA, isolate: GRS08457 AB554024.1 1 20101229 489483 HBV genotype D DNA, isolate: GRS08538 AB554016.1 1 20101229 489483 HBV genotype D DNA, isolate: TRF08226 HE974380.1 2 20130801 489484 HBV genotype E, isolate Mart-B63 HE974384.1 2 20130801 489484 HBV genotype E, isolate Mart-B84 HE974366.1 2 20130801 1219350 HBV genotype F2, isolate Mart-B18 HE974369.1 2 20130801 1219350 HBV genotype F2, isolate Mart-B26 HE974368.1 2 20130801 1219351 HBV genotype F4, isolate Mart-B24 AB516393.1 1 20100907 489493 HBV genotype H DNA AB644282.1 2 20120217 1052603 HBV recombinant B/C DNA, isolate: NAB20 AB644285.1 2 20120217 1052604 HBV recombinant C/G DNA, isolate: NAB46 X51970.1 10 19960114 10407 Hepatitis B virus AY040627.1 2 20010810 10407 Hepatitis B virus genotype C AF222322.1 1 20000309 10407 Hepatitis B virus isolate CH109 U46935.1 3 20000304 10407 Hepatitis B virus subtype ayw3q AJ309370.1 1 20010815 10407 Hepatitis B virus, genotype A, isolate X104 AJ344117.1 1 20020206 10407 Hepatitis B virus, genotype D FJ361772.1 1 20091002 621277 Hepatitis B virus 146/Thailand HF571060.1 3 20150422 1282342 Hepatitis B virus subgenotype A3/genotype E isolate 56325 AB176642.1 1 20041008 106820 Hepatitis B virus subtype ADR AM282986.1 5 20100427 10408 Hepatitis B virus subtype ADW2, genotype A AF193863.1 2 20010416 113194 Orangutan hepadnavirus AJ132997.1 2 20050415 11103 Hepatitis C virus AY859526.1 5 20110927 356391 Hepatitis C virus (isolate 6a33) JN588558.1 1 20111211 356114 Hepatitis C virus genotype 3 strain NCVI/PK1 JX227964.1 2 20130618 33745 Hepatitis C virus genotype 4 isolate HCV-unclassified4/GB/BID-G1253 FJ821465.1 3 20100325 679182 Hepatitis C virus strain M21-2k/1b EU155216.2 5 20140815 31646 Hepatitis C virus subtype 1a EU155260.2 4 20100113 31647 Hepatitis C virus subtype 1b AM910652.2 2 20080623 484894 Hepatitis C virus subtype 1g AB690461.1 2 20120916 31649 Hepatitis C virus subtype 2a genomic RNA, complete genome, strain: J6CF/JFH2.1 JX227965.1 2 20130618 31651 Hepatitis C virus subtype 2c isolate HCV-2c/GB/BID-G1293 JX227953.1 2 20130618 356466 Hepatitis C virus subtype 2k isolate HCV-2k/GB/BID-G1242 JX227952.1 2 20130618 1208063 Hepatitis C virus subtype 2k/1b isolate HCV-2k1b/GB/BID-G1241 JX227967.1 2 20130618 1094901 Hepatitis C virus subtype 2m isolate HCV-2m/CA/BID-G1314 GQ275355.1 1 20110406 356426 Hepatitis C virus subtype 3a JX227954.1 2 20130618 42792 Hepatitis C virus subtype 3g isolate HCV-3g/GB/BID-G1243 JX227955.1 2 20130618 1094895 Hepatitis C virus subtype 3i isolate HCV-3i/GB/BID-G1244 AB795432.1 1 20130306 31653 Hepatitis C virus subtype 4a genomic RNA isolate: HCVgenotype4a-KM JX227963.1 2 20130618 1094899 Hepatitis C virus subtype 4g isolate HCV-4g/GB/BID-G1252 JX227958.1 2 20130618 1094898 Hepatitis C virus subtype 4L isolate HCV-4l/GB/BID-G1247 JX227972.1 2 20130618 1094900 Hepatitis C virus subtype 4m isolate HCV-4m/GB/BID-G1657 JX227970.1 2 20130618 693426 Hepatitis C virus subtype 4n isolate HCV-4n/GB/BID-G1655 JX227979.1 2 20130618 745709 Hepatitis C virus subtype 4o isolate HCV-4o/GB/BID-G2039 JX227962.1 2 20130618 693427 Hepatitis C virus subtype 4r isolate HCV-4r/GB/BID-G1251 JX227960.1 2 20130618 1208062 Hepatitis C virus subtype 4v isolate HCV-4v/GB/BID-G1249 DQ480514.1 3 20110927 31655 Hepatitis C virus subtype 6a strain 6a63 EF424629.1 2 20070925 438880 Hepatitis C virus subtype 6c EF424628.1 2 20070925 413256 Hepatitis C virus subtype 6l EF424627.1 2 20070925 413257 Hepatitis C virus subtype 6o EF424626.1 2 20070925 438881 Hepatitis C virus subtype 6p EF424625.1 2 20070925 467339 Hepatitis C virus subtype 6q JX826592.1 1 20121121 1259832 Recombinant Hepatitis C virus 3a-2a (SA1/JFH1) HQ852457.1 2 20110302 945057 Recombinant Hepatitis C virus DBN-JFH1 HQ852455.1 2 20110302 945058 Recombinant Hepatitis C virus DH1-JFH1 HQ852456.1 2 20110302 945059 Recombinant Hepatitis C virus DH5-JFH1 HQ852454.1 2 20110302 945060 Recombinant Hepatitis C virus DH6-JFH1 JF343785.2 2 20110421 1006436 Recombinant Hepatitis C virus ED43(5'UTR-NS2)/JFH1_T827A,T977S JF343787.2 2 20110421 1006438 Recombinant Hepatitis C virus HK6a(5'UTR-NS2)/JFH1_F350S,N417T FJ230883.1 1 20090211 595609 Recombinant Hepatitis C virus HK6a/JFH-1 JF343781.2 2 20110421 1006432 Recombinant Hepatitis C virus J4(5'UTR-NS2)/JFH1_F886L,Q1496L FJ230881.1 1 20090211 595610 Recombinant Hepatitis C virus J4/JFH1 JF343793.1 2 20110421 1006444 Recombinant Hepatitis C virus J6(5'UTR(1b-E1)-NS2)/JFH1 JF343792.1 2 20110421 1006443 Recombinant Hepatitis C virus J6(5'UTR(2a-DomI/II)-NS2)/JFH1 JF343791.1 2 20110421 1006442 Recombinant Hepatitis C virus J6(5'UTR(Cell-ATAD1)-NS2)/JFH1 JF343788.1 2 20110421 1006439 Recombinant Hepatitis C virus J6(5'UTR(Cell-U3)-NS2)/JFH1 JF343789.1 2 20110421 1006440 Recombinant Hepatitis C virus J6(5'UTR(Cell-U3WTS1)-NS2)/JFH1 JF343790.1 2 20110421 1006441 Recombinant Hepatitis C virus J6(5'UTR(Cell-U6)-NS2)/JFH1 JF343782.1 2 20110421 1006433 Recombinant Hepatitis C virus J6(5'UTR-NS2)/JFH1 HQ852467.1 2 20120106 945061 Recombinant Hepatitis C virus J6/JFH1(DH6-NS5A) HQ852463.1 2 20120106 945062 Recombinant Hepatitis C virus J6/JFH1(ED43-NS5A) HQ852458.1 2 20120106 945063 Recombinant Hepatitis C virus J6/JFH1(H77C-NS5A) HQ852468.1 2 20120106 945064 Recombinant Hepatitis C virus J6/JFH1(HCV1-NS5A) HQ852465.1 2 20120106 945065 Recombinant Hepatitis C virus J6/JFH1(HK6a-NS5A) HQ852469.1 2 20120106 945066 Recombinant Hepatitis C virus J6/JFH1(J1-NS5A) HQ852460.1 2 20120106 945067 Recombinant Hepatitis C virus J6/JFH1(J4-NS5A) HQ852461.1 2 20120106 945068 Recombinant Hepatitis C virus J6/JFH1(J6-NS5A) HQ852466.1 2 20120106 945069 Recombinant Hepatitis C virus J6/JFH1(QC69-NS5A) HQ852464.1 2 20120106 945071 Recombinant Hepatitis C virus J6/JFH1(SA13-NS5A) HQ852459.1 2 20120106 945072 Recombinant Hepatitis C virus J6/JFH1(TN-NS5A) JN180456.1 2 20120106 1053139 Recombinant Hepatitis C virus J6/JFH1-452 KF693780.1 2 20131126 1406420 Recombinant Hepatitis C virus J6/JFH1-ED43(NS4A) KF693776.1 2 20131126 1406421 Recombinant Hepatitis C virus J6/JFH1-H77(NS4A) JN180455.1 2 20120106 1053140 Recombinant Hepatitis C virus J6/JFH1-HK6a KF693782.1 2 20131126 1406422 Recombinant Hepatitis C virus J6/JFH1-HK6a(NS4A) KF693778.1 2 20131126 1406423 Recombinant Hepatitis C virus J6/JFH1-J4(NS4A) JN180452.1 2 20120106 1053141 Recombinant Hepatitis C virus J6/JFH1-J6 KF693779.1 2 20131126 1406424 Recombinant Hepatitis C virus J6/JFH1-J6(NS4A) JN180459.1 2 20120106 1053142 Recombinant Hepatitis C virus J6/JFH1-JCH2 JN180460.1 2 20120106 1053143 Recombinant Hepatitis C virus J6/JFH1-JCH4 JN180457.1 2 20120106 1053144 Recombinant Hepatitis C virus J6/JFH1-K3a.650 JN180458.1 2 20120106 1053145 Recombinant Hepatitis C virus J6/JFH1-NZL1 KF693783.1 2 20131126 1406425 Recombinant Hepatitis C virus J6/JFH1-QC69(NS4A) JN180453.1 2 20120106 1053146 Recombinant Hepatitis C virus J6/JFH1-S52 JN180454.1 2 20120106 1053147 Recombinant Hepatitis C virus J6/JFH1-SA13 KF693781.1 2 20131126 1406426 Recombinant Hepatitis C virus J6/JFH1-SA13(NS4A) KF693777.1 2 20131126 1406427 Recombinant Hepatitis C virus J6/JFH1-TN(NS4A) JF343783.1 2 20110421 1006434 Recombinant Hepatitis C virus J8(5'UTR-NS2)/JFH1 FJ230882.1 1 20090211 595611 Recombinant Hepatitis C virus J8/JFH1 FJ230884.1 1 20090211 595612 Recombinant Hepatitis C virus QC69/JFH1 JF343784.2 2 20110421 1006435 Recombinant Hepatitis C virus S52(5'UTR-NS2)/JFH1_I793S, K1404Q JF343786.2 2 20110421 1006437 Recombinant Hepatitis C virus SA13(5'UTR-NS2)/JFH1_A1022G,K1119R HQ852453.1 2 20110302 945073 Recombinant Hepatitis C virus TN-JFH1 X04451.1 9 20081023 12475 Hepatitis delta virus U81989.1 4 20050418 12475 Hepatitis delta virus genotype IC (Ethiopia 1) U81988.1 4 20050418 12475 Hepatitis delta virus genotype IC (Somalia) AJ000558.1 4 20061114 12475 Hepatitis delta virus isolate Central African Republic JN998607.1 2 20120816 1213422 Ferret hepatitis E virus strain FRHEV20 X98292.1 8 19980617 12461 Hepatitis E virus AB236320.1 3 20090128 12461 Hepatitis E virus isolate:JMNG-Oki02C GU345042.1 1 20100907 879096 Hepatitis E virus rat/R63/DEU/2009 GU345043.1 1 20100907 879095 Hepatitis E virus rat/R68/DEU/2009 AB593690.1 1 20111026 509628 Hepatitis E virus type 3 genomic RNA, isolate: JE03-1760F_p10/B AB073912.1 4 20090118 63421 Swine hepatitis E virus U22304.1 3 20050417 39113 Hepatitis GB virus B M22056.1 4 20000304 28300 Heron hepatitis B virus AJ251937.1 2 20020123 110944 Stork hepatitis B virus1 AB218609.1 3 20070818 331975 Heterocapsa circularisquama RNA virus KF875586.1 1 20140217 1459800 Hibiscus bacilliform virus GD1 X86448.2 2 20050418 53181 Hibiscus chlorotic ringspot virus AB917427.1 1 20141022 233051 Hibiscus latent Fort Pierce virus genomic RNA isolate: J FJ827631.1 2 20090925 11024 Highlands J virus AB017037.1 4 20081203 81583 Himetobi P virus JQ723474.1 2 20120805 421010 Hippeastrum mosaic virus isolate Marijiniup 6 FJ376982.1 2 20110318 38142 Hirame rhabdovirus AY036009.1 5 20050416 223279 Hollyhock leaf crumple virus-[Cairo] AF014881.1 5 20050415 223280 Hollyhock leaf crumple virus-[Giza] FR772082.1 1 20120110 163655 Hollyhock leaf curl virus, isolate [Pakistan:20-4:06] Faisalabad3 FR772081.1 1 20120110 944994 Hollyhock yellow vein mosaic virus isolate [Pakistan:17-5:06] Lahore10 DQ288865.1 2 20060614 359812 Homalodisca coagulata virus-1 HQ677625.1 3 20110914 943272 Honeysuckle ringspot virus isolate California AB236322.1 5 20100603 435486 Honeysuckle yellow vein beta-[Japan:Fukui:2001] AB236326.1 5 20100603 434070 Honeysuckle yellow vein beta-[Japan:Masuda:2003] AB236327.1 4 20100603 434066 Honeysuckle yellow vein mosaic beta-[Japan:Kumamoto:1998] AJ543430.1 2 20050415 221037 Honeysuckle yellow vein betasatellite AB236324.1 5 20100603 435488 Honeysuckle yellow vein Japan betasatellite [Japan:Miyizaki:2001] AB178949.1 5 20121220 1233675 Honeysuckle yellow vein Kagoshima virus AB020781.1 3 20091118 180587 Honeysuckle yellow vein mosaic virus AB236323.1 5 20100603 435487 Honeysuckle yellow vein mosaic virus-[Japan:Miyazaki:2001] AB287440.1 3 20081214 417190 Honeysuckle yellow vein mosaic virus-[Nara1] AB287441.1 3 20081214 417191 Honeysuckle yellow vein mosaic virus-[Nara2] FJ817425.1 1 20090405 240865 Honeysuckle yellow vein virus AB236321.1 5 20100603 434023 Honeysuckle yellow vein virus-[Japan:Fukui:2001] AB236325.1 5 20100603 435489 Honeysuckle yellow vein virus-[Japan:Masuda:2003] AJ543429.1 2 20050415 240867 Honeysuckle yellow vein virus-[UK2] AB032469.1 2 20010205 104263 Hop latent virus AY623627.1 3 20050122 41764 Hordeum mosaic virus strain ATCC PV81 AM932425.1 2 20150307 263793 Horsegram yellow mosaic virus segment DNA-A AM932426.1 2 20150307 263793 Horsegram yellow mosaic virus segment DNA-B U49907.1 4 20050417 46448 Horseradish curly top virus JX429923.1 1 20121003 264076 Horseradish latent virus isolate ID1 DQ000496.1 3 20060228 329641 Human bocavirus isolate st2 FJ375127.1 2 20111104 1108925 Human bocavirus isolate SH1 FJ375128.1 2 20111104 1108926 Human bocavirus isolate SH2 DQ778300.1 1 20060725 394504 Human bocavirus WLL-1 EF441262.1 1 20070321 430048 Human bocavirus WLL-2 EF584447.1 1 20070529 444473 Human bocavirus WLL-3 FJ375129.1 2 20111104 1108927 Human bocavirus isolate SH3 KJ206566.1 2 20141119 1525173 Human circovirus VS6600022 JQ410000.1 1 20120429 1176035 Alpaca respiratory coronavirus isolate CA08-1/2008 AF304460.1 3 20010717 11137 Human coronavirus 229E AY597011.2 6 20060128 290028 Human coronavirus HKU1 AY884001.1 1 20060701 290028 Human coronavirus HKU1 genotype B DQ339101.1 1 20060701 290028 Human coronavirus HKU1 strain N5P8 genotype A/B recombinant AY567487.2 4 20060111 277944 Human Coronavirus NL63 AY518894.1 4 20060111 270642 Human group 1 coronavirus associated with pneumonia KJ194505.1 1 20140408 1233383 Human cosavirus isolate Cosavirus_Amsterdam_1994 KF726987.2 5 20140515 1455626 Human cyclovirus strain 7046A KC771281.1 2 20130921 1345637 Human cyclovirus VS5700009 AY037928.1 1 20011030 166122 Human endogenous retrovirus K113 FJ938067.1 1 20090713 627439 Human enteric coronavirus strain 4408 KJ413144.1 1 20150416 1488574 Human genital-associated circular DNA virus-1 isolate 349 FR823283.1 1 20110606 988776 Human gyrovirus type 1, isolate 915 F 06 007 FD X14112.1 32 20081023 10298 Human herpesvirus 1 Z86099.2 20 20061114 10310 Human herpesvirus 2 DQ008355.1 2 20081103 10335 Human herpesvirus 3 strain VariVax X04370.1 45 20050418 10338 Human herpesvirus 3 strain Dumas AJ507799.2 14 20080515 10376 Human herpesvirus 4 wt (recreated) V01555.2 64 20060504 10376 Human herpesvirus 4 X17403.1 46 20061114 10359 Human herpesvirus 5 X83413.1 21 20061114 10368 Human herpesvirus 6 KC465951.1 3 20130728 32603 Human herpesvirus 6A strain GS AF157706.1 8 20061114 32604 Human herpesvirus 6B AF037218.1 11 20091016 10372 Human herpesvirus 7 JQ619843.1 1 20121007 37296 Human herpesvirus 8 strain DG1 KF703446.1 2 20131212 111469 Retroperitoneal fibromatosis-associated herpesvirus isolate RFHVMnM78114 JX245014.1 2 20130627 12721 Human immunodeficiency virus isolate 10Gab1190 AJ006287.1 5 20061114 11676 Human immunodeficiency virus 1 isolate 89ES061 AJ291718.1 5 20061114 11676 Human immunodeficiency virus 1 isolate Cameroon 97CM-MP818 AJ291719.1 5 20061114 11676 Human immunodeficiency virus 1 strain 99FR-MP129 AJ291720.1 5 20061114 11676 Human immunodeficiency virus 1 strain 99FR-MP307 X01762.1 16 20081023 11676 Human immunodeficiency virus 1 X04415.1 6 20050418 11676 Human immunodeficiency virus 1 isolate MAL JN571034.1 2 20140608 11676 UNVERIFIED:Human immunodeficiency virus 1 isolate LTNP from USA X05291.1 19 20050418 11709 Human immunodeficiency virus 2, isolate ROD X73487.1 43 20081023 28282 Human adenovirus 12 GU191019.1 2 20100728 10528 Human adenovirus 18 AM749299.1 1 20091130 10529 Human adenovirus 31 JF964962.1 4 20120207 1069441 Human adenovirus 61, strain MZ KF268119.1 1 20130826 129875 Human mastadenovirus A strain human/USA/UFL_Adv31/2005/31[P31H31F31] DQ086466.1 1 20051123 45659 Human adenovirus 3 JN860679.1 1 20130507 260047 Human adenovirus 3+7 strain Takeuchi EF564601.1 1 20090902 459785 Human adenovirus 3+11p strain OvAd2 AY495969.1 2 20050416 10519 Human adenovirus 7 vaccine strain JN860677.1 1 20130507 326124 Human adenovirus 7d2 strain FS2154 KF906413.1 1 20140219 1461395 Human adenovirus 11+34 strain IC763 FJ597732.1 1 20091231 343463 Human adenovirus 11a AY803294.1 2 20051101 10521 Human adenovirus 14 strain de Wit JN860680.1 1 20130507 31544 Human adenovirus 16 strain E26 KF528688.1 1 20140720 32608 Human adenovirus 21 KF802426.1 1 20140717 1521028 Human adenovirus 21a isolate LRTI-2 AY737797.1 2 20051228 10548 Human adenovirus 34 strain Compton AY128640.2 4 20050416 10522 Human adenovirus 35 AY737798.1 1 20050831 107462 Human adenovirus 50 strain Wan FJ643676.1 3 20100205 714978 Human adenovirus 55 JN860676.1 2 20130604 1337398 Human adenovirus 66 strain 87-922 JN860678.1 2 20121116 1096763 Human adenovirus 68 strain Arg 827/04 AY598970.1 2 20041113 108098 Human mastadenovirus B strain 11p FJ025909.1 5 20120311 585083 Simian adenovirus 27.1 FJ025928.1 5 20120311 585084 Simian adenovirus 27.2 FJ025914.1 5 20120311 585085 Simian adenovirus 28.1 FJ025915.1 5 20120311 585086 Simian adenovirus 28.2 FJ025916.1 5 20120311 585063 Simian adenovirus 29 FJ025911.1 5 20120311 585066 Simian adenovirus 32 FJ025908.1 5 20120311 585067 Simian adenovirus 33 FJ025912.1 5 20120311 585089 Simian adenovirus 35.1 FJ025910.1 5 20120311 585090 Simian adenovirus 35.2 FJ025913.1 5 20120311 585095 Simian adenovirus 41.1 FJ025927.1 5 20120311 585096 Simian adenovirus 41.2 FJ025930.1 5 20120311 585080 Simian adenovirus 46 FJ025929.1 5 20120311 585081 Simian adenovirus 47 AF534906.1 4 20110909 10533 Human adenovirus 1 J01917.1 27 20061114 10515 Human adenovirus 2 M73260.1 8 20061114 28285 Human adenovirus 5 FJ349096.1 3 20111014 10534 Human adenovirus 6 HQ003817.1 4 20120418 129951 Human mastadenovirus C, strain 16700 FJ025906.1 5 20120311 585087 Simian adenovirus 31.1 FJ025904.1 5 20120311 585088 Simian adenovirus 31.2 FJ025905.1 5 20120311 585068 Simian adenovirus 34 FJ025907.1 5 20120311 585093 Simian adenovirus 40.1 FJ025926.1 5 20120311 585094 Simian adenovirus 40.2 FJ025903.1 5 20120311 585097 Simian adenovirus 42.1 FJ025902.1 5 20120311 585098 Simian adenovirus 42.2 FJ025925.1 5 20120311 585099 Simian adenovirus 42.3 FJ025900.1 5 20120311 585077 Simian adenovirus 43 FJ025899.1 5 20120311 585078 Simian adenovirus 44 FJ025901.1 5 20120311 585079 Simian adenovirus 45 AB448767.1 2 20090501 31545 Human adenovirus 8 AB724351.1 3 20140320 28275 Human adenovirus 10 DNA strain: J.J.; ATCC VR-1504 AF108105.1 2 20050415 46922 Human adenovirus 17 JQ326209.1 1 20120219 28278 Human adenovirus 19 FJ404771.1 5 20090813 46924 Human adenovirus 22 KF279629.1 3 20140515 46925 Human adenovirus 23 isolate Aids32/Manchester/1993 FJ824826.1 2 20100816 46930 Human adenovirus 28 GQ384080.1 1 20100324 46936 Human adenovirus 36 DQ900900.1 2 20090107 52275 Human adenovirus 37 KC529648.1 1 20130220 46938 Human adenovirus 43 strain 1309 from USA AY875648.1 2 20060223 46941 Human adenovirus 46 DQ393829.1 1 20060914 218120 Human adenovirus 49 AB448770.2 3 20090815 651580 Human adenovirus 54 HM770721.2 5 20141101 880565 Human adenovirus 56 HQ883276.1 4 20120826 980087 Human adenovirus 58, strain human/ARG/AdCor-96-487/1996/58[P58H58F29] JN935766.1 2 20120330 1124795 Human adenovirus 63 strain human/USA/BP-7-2/1959/63[P30H30F29] EF121005.1 2 20120212 1145295 Human adenovirus 64 strain human/USA/C/1993/64[P22H19F37], AP012285.1 4 20120425 1094363 Human adenovirus 65 strain B172/Dhaka City AP012302.1 2 20130315 1101371 Human adenovirus 67 DNA, strain: BGD/2005/B109/[P67/H9/F67] KF268207.1 4 20150422 1643649 Human adenovirus 71 strain human/DEU/HEIM_00085/1987/NEW[P9H20F67] AB765926.1 2 20140312 1417598 Human adenovirus Chiba_E086/2012 HQ007053.1 3 20130421 130310 Human mastadenovirus D MPW-2011 AB605241.1 2 20110531 130310 Human mastadenovirus D, isolate: 880249C/Hiroshima/1988 JF799911.1 3 20120418 130310 Human mastadenovirus D, strain CDPH59 FJ169625.1 7 20120418 130310 Human mastadenovirus D, strain human/DEU/IAI-1/2005/53[P37H22F8] KF268201.1 3 20140102 130310 Human mastadenovirus D strain human/DEU/HEIM_00080/1982/NEW[P33H56F56] KF268335.1 3 20140102 130310 Human mastadenovirus D strain human/DEU/HEIM_00088/1985/NEW[P38H63F44] KF268325.1 3 20140102 130310 Human mastadenovirus D strain human/DEU/HEIM_00090/1986/NEW[P38H32F27] KF268322.1 3 20140102 130310 Human mastadenovirus D strain human/DEU/HEIM_00091/1986/NEW[P62H33F17] KF268312.1 3 20140102 130310 Human mastadenovirus D strain human/DEU/HEIM_00096/1984/NEW[P22H38F17] KF268206.1 3 20140102 130310 Human mastadenovirus D strain human/DEU/HEIM_00100/1984/NEW[P67H9F15] JN254802.1 2 20120725 1123958 Chimpanzee adenovirus Y25 AY458656.2 3 20141101 28280 Human adenovirus 4 strain CL68578 AY487947.1 5 20081229 130308 Human mastadenovirus E AF394196.1 2 20050415 175567 Simian adenovirus 25 FJ025918.1 5 20120311 585082 Simian adenovirus 25.2 FJ025923.1 5 20120311 585060 Simian adenovirus 26 FJ025920.1 5 20120311 585064 Simian adenovirus 30 FJ025917.1 5 20120311 585070 Simian adenovirus 36 FJ025921.1 5 20120311 585091 Simian adenovirus 37.1 FJ025919.1 5 20120311 585092 Simian adenovirus 37.2 FJ025922.1 5 20120311 585072 Simian adenovirus 38 FJ025924.1 5 20120311 585073 Simian adenovirus 39 DQ315364.2 3 20080914 10524 Human adenovirus 41 isolate Tak L19443.1 11 20120429 130309 Human mastadenovirus F DQ923122.2 4 20070615 332179 Human adenovirus 52 isolate T03-2244 AY771780.1 3 20050528 310540 Simian adenovirus 1 strain ATCC VR-195 AF371337.2 3 20050415 162145 Human metapneumovirus KC113191.1 1 20130405 10566 Human papillomavirus isolate HPV_SD2R.align1 GU117632.1 2 20110623 909331 Human papillomavirus type 132 GU129016.1 3 20110623 942038 Human papillomavirus type 148, Hu/34-60/DEU/2006 AB793779.1 1 20140507 1297549 Human papillomavirus type 78 DNA isolate: z008 GU233853.1 2 20110623 931210 Human papillomavirus type 129 GU117634.1 2 20110623 909333 Human papillomavirus type 134 HM999988.1 1 20120603 1070409 Human papillomavirus type 136 isolate CL3865 HM999992.1 1 20120603 1070413 Human papillomavirus type 140 isolate NJ2801C1 HM999993.1 1 20120603 1070414 Human papillomavirus type 141 isolate NJ2801Cn HM999995.1 1 20120603 1070416 Human papillomavirus type 143 isolate CL3220 HM999997.1 1 20120603 1070418 Human papillomavirus type 145 isolate CL4112 JN171845.1 1 20111113 1110710 Human Papillomavirus type 153 JN211193.1 1 20130606 1195796 Human papillomavirus type 154 isolate PV77 JF906559.1 4 20121121 1165934 Human papillomavirus type 155 isolate SE42 KF006398.1 1 20131216 1434986 Human papillomavirus type 171 KF006399.1 1 20131216 1434987 Human papillomavirus type 172 KF006400.1 1 20131216 1434988 Human papillomavirus type 173 KM085343.1 1 20140911 1542134 Human papillomavirus type 197 isolate SE46 KF530221.1 1 20130915 12730 Human parainfluenza virus 1 strain HPIV1/AUS/53/2007 AF457102.1 3 20050415 188538 Human parainfluenza virus 1 strain Washington/1964 AB012132.1 4 20090127 11216 Human parainfluenza virus 3 KF483663.1 1 20130906 11224 Human parainfluenza virus 4a isolate HPIV4_DK(459) EU627591.1 1 20090715 11226 Human parainfluenza virus 4b EF051629.2 4 20080604 12063 Human parechovirus 1 isolate BNI-788St AJ005695.1 4 20010626 39085 Human parechovirus 2 AJ889918.1 5 20070606 195055 Human parechovirus 3 DQ315670.1 1 20061008 362784 Human parechovirus 4 isolate K251176-02 AM235750.1 3 20070321 362784 Human parechovirus 4 strain T75-4077 JX050181.1 1 20120806 376148 Human parechovirus 5 strain CH-ZJ1 AB252582.1 3 20080621 411152 Human parechovirus 6 strain: NII561-2000 EU716175.1 3 20090219 602074 Human parechovirus 8 HM011561.1 1 20100513 746830 Human polyomavirus 6 isolate 607b KJ733012.1 1 20140928 746831 Human polyomavirus 7 isolate PITT1 HQ696595.1 2 20110420 943908 Human polyomavirus 9 isolate HPyV9 FR823284.2 1 20110705 988774 Human polyomavirus IPPyV, isolate 915 F 06 001 PJ JX308829.1 2 20130814 1303334 Human polyomavirus 12 strain hu1403 AF013254.1 3 20050415 11250 Human respiratory syncytial virus AY353550.1 1 20040401 253182 Human Respiratory syncytial virus 9320 KJ817798.1 1 20140923 1545854 Human respiratory syncytial virus MinA KJ817799.1 1 20140923 1545855 Human respiratory syncytial virus MinB KJ817801.1 1 20140923 1545857 Human respiratory syncytial virus MinFLC KJ817800.1 1 20140923 1545856 Human respiratory syncytial virus MinL KP264967.1 1 20150122 1595998 Human smacovirus 1 isolate France/12/2008/3454 KP233180.1 1 20150131 1595998 Human smacovirus 1 isolate Oregon/6/2011/GottageGrove/5A1 GQ404856.1 1 20100315 743300 Human stool-associated circular virus NG13 JQ941880.1 3 20131204 1431464 Bovine hungarovirus 1 strain BHUV1/2008/HUN KC519324.1 2 20140924 1316453 Hybrid snakehead virus isolate C1207 AY707100.1 3 20051019 112228 Hydrangea ringspot virus isolate PD 109 KF413620.1 2 20140604 1367218 Hypericum japonicum associated circular DNA virus isolate VNHJ1W AP009046.1 5 20081229 28288 Hyphantria cunea nucleopolyhedrovirus JQ814852.1 3 20120927 1195279 Ia io picornavirus 1 M75136.2 8 20130901 10401 Ictalurid herpesvirus 1 JX193798.1 1 20120903 1167696 Ikoma lyssavirus isolate RV2508 KC481679.1 3 20130726 59563 Ilheus virus strain BrMS-MQ10 X93218.1 2 19980122 11612 Impatiens necrotic spot virus segment L M74904.1 4 20000304 11612 Impatiens necrotic spot virus segment M X66972.1 10 19931129 11612 Impatiens necrotic spot virus segment S Z24758.1 8 20061114 31600 Indian cassava mosaic virus component A Z24759.1 6 19980529 31600 Indian cassava mosaic virus component B AJ314739.1 6 20150307 223281 Indian cassava mosaic virus-[Maharashtra] DNA-A AJ314740.1 6 20150307 223281 Indian cassava mosaic virus-[Maharashtra] DNA-B AF406744.1 2 20021121 104664 Indian citrus ringspot virus AM111353.1 2 20150307 10995 Infectious bursal disease virus segment A AM111354.1 2 20150307 10995 Infectious bursal disease virus segment B EU868609.1 2 20091029 12742 Infectious flacherie virus X89213.1 22 20081007 11290 Infectious hematopoietic necrosis virus L40883.1 4 20000304 11290 Infectious hematopoietic necrosis virus strain WRAC AY373381.1 1 20030922 55987 Infectious salmon anemia virus segment 1 AF404346.1 5 20070628 55987 Infectious salmon anemia virus segment 2 AF404345.1 5 20070628 55987 Infectious salmon anemia virus segment 3 AF404344.1 5 20070628 55987 Infectious salmon anemia virus segment 4 AF404343.1 5 20070628 55987 Infectious salmon anemia virus segment 5 AF404342.1 4 20070823 55987 Infectious salmon anemia virus segment 6 AF404341.1 5 20070823 55987 Infectious salmon anemia virus segment 7 AF404340.1 5 20070823 55987 Infectious salmon anemia virus segment 8 AF371960.1 3 20061114 180170 Infectious spleen and kidney necrosis virus AY779031.1 2 20061117 216928 Large yellow croaker iridovirus AY894343.1 3 20050805 322017 Orange-spotted grouper iridovirus AY532606.1 2 20050416 263891 Rock bream iridovirus strain RBIV-KOR-TY1 FJ966079.1 4 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 1 FJ966080.1 4 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 2 FJ966081.1 4 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 3 FJ966082.1 6 20100907 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 4 FJ966083.1 4 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 5 FJ966084.1 5 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 6 FJ966085.1 5 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 7 FJ966086.1 4 20090603 641501 Influenza A virus (A/California/04/2009(H1N1)) segment 8 AF144300.1 2 20000303 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 1 AF144301.1 2 20000308 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 2 AF144302.1 2 20000308 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 3 AF144303.1 2 20000308 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 4 AF144304.1 4 20070711 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 5 AF144305.1 4 20070711 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 6 AF144306.1 5 20070711 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 7 AF144307.1 4 20050415 93838 Influenza A virus (A/goose/Guangdong/1/1996(H5N1)) segment 8 AJ404630.1 3 20150307 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 1 AJ404634.1 3 20150307 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 2 AJ404637.1 3 20150307 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 3 AJ404626.1 4 20150307 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 4 AF255742.1 2 20040914 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 5 AJ404629.1 4 20150307 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 6 AJ278646.1 5 20061114 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 7 AF256176.1 3 20050415 130760 Influenza A virus (A/Hong Kong/1073/99(H9N2)) segment 8 CY011119.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 1 CY011118.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 2 CY011117.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 3 CY011112.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 4 CY011115.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 5 CY011114.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 6 CY011113.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 7 CY011116.1 1 20070324 370213 Influenza A virus (A/mallard/Maryland/881/2002(H6N2)) segment 8 CY011135.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 1 CY011134.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 2 CY011133.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 3 CY011128.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 4 CY011131.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 5 CY011130.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 6 CY011129.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 7 CY011132.1 1 20060606 370519 Influenza A virus (A/New York/599/1996(H3N2)) segment 8 CY011143.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 1 CY011142.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 2 CY011141.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 3 CY011136.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 4 CY011139.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 5 CY011138.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 6 CY011137.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 7 CY011140.1 1 20060606 370522 Influenza A virus (A/New York/602/1996(H3N2)) segment 8 CY011127.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 1 CY011126.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 2 CY011125.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 3 CY011120.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 4 CY011123.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 5 CY011122.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 6 CY011121.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 7 CY011124.1 2 20060822 370128 Influenza A virus (A/Northern Territory/60/1968(H3N2)) segment 8 V01106.1 8 20060705 392812 Influenza A virus (A/PR/8/1938(H1N1)) AF389115.1 3 20030529 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 1 AF389116.1 3 20030529 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 2 AF389117.1 3 20030529 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 3 AF389118.1 4 20050415 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 4 AF389119.1 3 20030529 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 5 AF389120.1 4 20050415 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 6 AF389121.1 4 20050415 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 7 AF389122.1 4 20050415 183764 Influenza A virus (A/Puerto Rico/8/34/Mount Sinai(H1N1)) segment 8 J02147.1 3 20060526 385600 Influenza A virus (A/Puerto Rico/8/1934(Cambridge)(H1N1)), segment 5 J02146.1 7 20060526 385600 Influenza A virus (A/Puerto Rico/8/1934(Cambridge)(H1N1)), segment 6 V00603.1 8 20030429 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) V01099.1 5 20060705 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) J02151.1 4 20050401 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) V01088.1 26 20050418 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) J02150.1 4 20060531 211044 Influenza A virus (A/Puerto Rico/8/1934(H1N1)), segment 8 HE584750.1 1 20110916 1086543 Influenza A virus (A/swine/Holguin/121/2010(H1N1)) segment 6 HE584757.1 1 20110916 1086544 Influenza A virus (A/swine/La Habana/130/2010(H1N1)) segment 5 HE589464.1 1 20110919 1086035 Influenza A virus (A/swine/Pinar del Rio/3/2010(H1N1)) segment 2 K00423.1 6 20050417 11520 Influenza B virus RNA-4 J02095.1 2 20000304 11520 Influenza B virus RNA-6 J02094.1 3 20050417 11520 Influenza B virus RNA-7 J02096.1 4 20061114 11520 Influenza B virus segment RNA-8 M14880.1 2 20060804 518987 Influenza B virus (B/Lee/1940) segment RNA-1 AF101982.1 3 20000418 518987 Influenza B virus (B/Lee/1940) segment RNA-2 AF102017.1 3 20000418 518987 Influenza B virus (B/Lee/1940) segment RNA-3 AY260942.1 1 20030504 98832 Influenza B virus (B/Memphis/12/97) segment 1 AY260943.1 1 20030504 98832 Influenza B virus (B/Memphis/12/97) segment 2 AY260944.1 1 20030504 98832 Influenza B virus (B/Memphis/12/97) segment 3 AY260945.1 2 20050416 98832 Influenza B virus (B/Memphis/12/97) segment 4 AY260946.1 1 20030504 98832 Influenza B virus (B/Memphis/12/97) segment 5 AY260947.1 2 20050416 98832 Influenza B virus (B/Memphis/12/97) segment 6 AY260941.1 2 20050416 98832 Influenza B virus (B/Memphis/12/97) segment 7 AY260948.1 1 20030504 98832 Influenza B virus (B/Memphis/12/97) segment 8 AY260949.1 1 20030504 228675 Influenza B virus (B/Memphis/12/97-MA) segment 1 AY260950.1 2 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 2 AY260951.1 2 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 3 AY260952.1 3 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 4 AY260953.1 2 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 5 AY260954.1 3 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 6 AY260955.1 3 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 7 AY260956.1 2 20050528 228675 Influenza B virus (B/Memphis/12/97-MA) segment 8 DQ643392.1 2 20060817 386586 Aedes taeniorhynchus iridescent virus AF303741.1 2 20050415 176652 Invertebrate iridescent virus 6 GQ918152.1 2 20110722 68347 Wiseana iridescent virus HF920637.1 1 20140625 72201 Armadillidium vulgare iridescent virus HF920633.1 2 20130910 1301279 Invertebrate iridovirus 22 U01834.1 6 20050417 10567 Iotapapillomavirus 1 EU839578.2 1 20090618 653358 Ipomoea yellow vein virus DQ328878.1 4 20080815 55096 Ippy virus segment L DQ328877.1 4 20080815 55096 Ippy virus segment S EF614260.1 2 20080719 249583 Irkut virus EF219380.1 2 20071121 294365 Israeli acute paralysis virus AY900001.1 1 20050803 322067 J-virus M80216.1 9 20050417 11746 Jaagsiekte sheep retrovirus AF105220.1 5 20050415 11746 Jaagsiekte sheep retrovirus strain JSRV21 M55506.1 3 20000304 11072 Japanese encephalitis virus M18370.1 5 20050417 11072 Japanese encephalitis virus (strain JaOArS982) AF254452.1 3 20080326 11072 Japanese encephalitis virus strain CH1392 L78128.1 4 20050701 11072 Japanese encephalitis virus strain Ling AF254453.1 3 20080326 11072 Japanese encephalitis virus strain T1P1 D86123.1 3 20050417 77344 Japanese iris necrotic ring virus AB027007.1 4 20050414 79917 Japanese yam mosaic virus KM189819.1 1 20141014 1559374 Jatropha leaf crumple India virus [J. curcas: Jodhpur] isolate SKJ3 KM023146.1 2 20141016 1547577 Jatropha leaf crumple virus isolate SKJ1 KM023145.1 1 20141005 543876 Jatropha leaf curl virus isolate AS-NBRI-Jg3 KF652077.1 3 20140824 1538465 Jatropha mosaic Lucknow virus clone AS-NBRI-JM2 J02226.1 6 20061114 10632 JC polyomavirus strain Mad1 HG764413.1 1 20140211 1419710 JC polyomavirus type 3A, isolate QLD-01 AY358022.2 2 20030829 11619 Junin virus segment L AY358023.2 2 20030829 11619 Junin virus segment S HM566194.1 1 20120503 864699 Jurona virus KJ469371.1 1 20150305 64299 Jutiapa virus strain JG-128 FJ531634.1 1 20090714 132477 Kalanchoe latent virus KC807173.1 3 20140604 1332247 Kamphang Phet virus strain KP84-0192 AF227240.1 2 20050415 122291 Kappapapillomavirus 1 K02708.1 4 20000304 10623 Kappapapillomavirus 2 KC807171.1 3 20140604 1332248 Karang Sari virus strain JKT10701 KF956377.1 2 20140828 68876 Kashmir bee virus isolate KBV_AY DQ112227.1 1 20051021 340921 Kelp fly virus D00637.1 10 20071214 12158 Kennedya yellow mosaic virus JF838187.1 2 20130809 1080799 Keunjorong mosaic virus isolate Cheongwon EF614261.1 2 20080719 237716 Khujand virus EF520289.1 2 20070911 423445 KI polyomavirus isolate Brisbane 003 EF127906.1 3 20070911 423446 KI polyomavirus Stockholm 60 EF127907.1 3 20070911 423447 KI polyomavirus Stockholm 350 EF127908.1 3 20070911 423448 KI polyomavirus Stockholm 380 JQ941664.1 1 20120918 318835 Kimberley virus isolate CS368 AB721500.1 2 20130419 394239 Koala retrovirus DNA clone: KV522 KM225264.1 1 20140818 1534467 Bainyik virus strain MK7979 KM225263.1 1 20140818 44027 Stratford virus strain C338 KM225265.1 1 20140818 1534468 Torres virus strain TS5273 KC984953.1 1 20131204 1428456 Kolente virus isolate DakAr K7292 AB219545.1 3 20090127 322053 Konjac mosaic virus isolate KoMV-F KM085029.1 2 20150314 1550518 Koolpinyah virus isolate DPP819 HM474855.1 1 20120316 318836 Kotonkan virus isolate IbAr23380 from Nigeria KC935379.1 1 20130702 1349385 Kunsagivirus 1 strain roller/SZAL6-KuV/2011/HUN JN860200.1 1 20111213 172148 Alkhumra hemorrhagic fever virus strain SCVHF001 HM055369.1 3 20120216 33743 Kyasanur forest disease virus AJ295948.1 2 20020115 111970 Kyuri green mottle mosaic virus U15146.1 4 20050417 11048 Lactate dehydrogenase-elevating virus KF562072.1 2 20140828 1468454 Lagenaria siceraria endornavirus-California isolate FB EU293110.1 1 20080516 38766 Lagos bat virus AF480454.1 2 20050415 188524 Felis domesticus papillomavirus type 1 AY904722.1 3 20070615 323364 Lynx rufus papillomavirus type 1 AY904724.1 3 20070615 323366 Panthera leo persica papillomavirus type 1 AY904723.1 3 20070615 323365 Puma concolor papillomavirus type 1 DQ180494.1 2 20070615 348686 Uncia uncia papillomavirus type 1 L22695.1 4 20050417 35258 Lambdapapillomavirus 2 FJ492744.1 2 20091023 1175854 Lambdapapillomavirus 3, isolate Zurich AY763115.1 1 20050621 312349 Procyon lotor papillomavirus 1 HQ585856.1 2 20130314 1104917 Crocuta crocuta papillomavirus 1 KP752043.1 1 20150424 1642929 Lambdina fiscellaria nucleopolyhedrovirus isolate GR15 EU554423.1 2 20080529 515320 Lamium leaf distortion virus KF934491.1 1 20140305 1464786 Laodelphax striatella honeydew virus 1 isolate Nanjing KM272628.1 1 20141126 1566869 Laodelphax striatellus picorna-like virus 2 isolate LsPV2 U73034.2 2 19991011 11620 Lassa virus segement L J04324.1 2 20000304 11620 Lassa virus segement S EU627612.1 2 20080815 45221 Latino virus segment L AF512830.1 5 20080913 45221 Latino virus segment S HQ113105.1 2 20110609 999883 Lausannevirus isolate 7715 X94560.1 18 19970716 45224 Leek white stripe virus HQ258895.1 1 20110601 42004 Leek yellow stripe virus isolate MS/SW/Aus1 KF757256.1 2 20140515 1497019 Leishmania aethiopica RNA virus isolate LRV2-Lae-L494 M92355.1 10 20061114 58103 Leishmania RNA virus 1 - 1 U32108.1 3 20000304 39116 Leishmania RNA virus 2 - 1 KP233194.1 1 20150131 1603069 Lemur smacovirus isolate SF5 S47266.1 5 20050417 12524 Junonia coenia densovirus AY461507.1 2 20040317 185636 Mythimna loreyi densovirus JX645046.1 1 20121111 185637 Pseudoplusia includens densovirus isolate IAF AY033435.1 2 20020108 46253 Bombyx mori densovirus 1 JX020762.1 1 20120808 1217821 Sibine fusca densovirus AY665654.1 2 20050726 292208 Dendrolimus punctatus densovirus JX110122.1 1 20120816 1221208 Papilio polyxenes densovirus isolate IAF HQ613271.1 2 20120913 1045778 Helicoverpa armigera densovirus strain SDBH2010-1 JQ596859.1 2 20120913 481315 Leporid herpesvirus 4 isolate LHV4012612 KM396707.1 2 20150417 1603963 Lesavirus 1 isolate Mis101308/2012 KM396708.1 2 20150417 1603964 Lesavirus 2 isolate Nai108015/2012 U15440.1 4 20040619 31713 Lettuce infectious yellows virus RNA 1 U15441.1 7 20050417 31713 Lettuce infectious yellows virus RNA 2 X97705.1 9 20050614 12202 Lettuce mosaic virus AJ867584.2 3 20060516 32612 Lettuce necrotic yellows virus AY535016.1 1 20040702 274495 Lettuce ring necrosis virus RNA 1 AY535017.1 1 20040702 274495 Lettuce ring necrosis virus RNA 2 AY535018.1 1 20040702 274495 Lettuce ring necrosis virus RNA 3 AY535019.1 1 20040702 274495 Lettuce ring necrosis virus RNA 4 AM745758.1 2 20081023 447171 Lettuce virus X EF687738.1 1 20080306 471285 Lettuce yellow mottle virus AY394490.1 3 20071101 1307956 Leucania separata nucleopolyhedrovirus strain AH1 EU074853.1 2 20080306 478550 Ligustrum necrotic ringspot virus AM048875.1 4 20050728 32624 Lily mottle virus 1 AJ516059.1 3 20041117 12173 Lily symptomless virus AJ633822.2 1 20050705 12194 Lily virus X complete genome Y10237.1 7 20030108 217686 Little cherry virus 1 KJ156523.1 2 20141115 874272 Lizard adenovirus 2 isolate 23-06 isolate 23-06 EF202833.1 1 20071115 172314 Ljungan virus strain 87-012G AF327920.2 4 20070501 172315 Ljungan virus 87-012 AF327922.2 4 20070501 172317 Ljungan virus 145SL AF327921.2 4 20070501 172316 Ljungan virus 174F JF828358.1 1 20111030 1513237 Lloviu cuevavirus strain MS-Liver-86/2003 EU489641.1 1 20080311 365150 Lolium latent virus KJ396935.1 2 20140501 1459044 Long Island tick rhabdovirus strain LS1 Y07863.1 3 20050418 11086 Louping ill virus U31286.1 3 20050417 12470 Lucerne transient streak virus EF494181.1 1 20070611 446549 Lucky bamboo bacilliform virus AJ965539.2 3 20060427 325111 Ludwigia yellow vein virus AF325528.1 4 20060318 376849 Lumpy skin disease virus NI-2490 JF720348.1 2 20120626 1072333 Lygus lineolaris virus 1 isolate LlV-1 KJ629170.1 2 20140925 1521188 Lymantria dispar iflavirus 1 isolate Ames AF081810.1 5 20050415 10449 Lymantria dispar multiple nucleopolyhedrovirus L63545.1 8 20020406 36363 Lymphocystis disease virus 1 AY380826.1 3 20050416 256729 Lymphocystis disease virus - isolate China J04331.1 4 20000304 11623 Lymphocytic choriomeningitis virus segement L M20869.1 2 20000304 11623 Lymphocytic choriomeningitis virus segment S KC802224.1 1 20140102 11961 Lymphoproliferative disease virus strain 12/AR/2009 JX159986.1 7 20140620 1236398 Macaca fascicularis polyomavirus 1 JN227533.1 3 20111129 944969 Cynomolgus macaque cytomegalovirus strain Ottawa DQ120516.1 2 20060404 47929 Macacine herpesvirus 3 AY037858.1 3 20050416 45455 Macacine herpesvirus 4 AY528864.1 2 20111016 272551 Macaca fuscata rhadinovirus AF083501.3 4 20050415 83534 Macaca mulatta rhadinovirus 17577 KP265674.1 4 20150131 123630 Macaca nemestrina rhadinovirus 2 strain J97167 X54482.1 6 20030211 338478 Macaque simian foamy virus AY358021.2 2 20030829 11628 Machupo virus segment L AY129248.1 2 20030529 11628 Machupo virus segment S HQ113110.1 1 20120903 1027947 Macrobrachium rosenbergii Taihu virus strain cn-taihu100401 KF537660.1 1 20141001 1527523 Macrophomina phaseolina tobamo-like virus strain IL-01 2013 KJ469623.1 2 20140501 1440170 Madariaga virus strain MADV/Mesocricetus/PER/75U40/1975 KP174727.1 1 20141228 1580607 Magnaporthe oryzae RNA virus AB176964.1 5 20080621 271257 Magnaporthe oryzae virus 1 AB300379.1 3 20090127 441999 Magnaporthe oryzae virus 2 JQ065046.1 1 20120320 1159903 Magpie-robin coronavirus HKU18 strain HKU18-chu3 U67839.1 2 20000304 51354 Maize chlorotic dwarf virus X14736.2 8 20040909 12138 Maize chlorotic mottle virus AJ001691.1 3 20050415 12203 Maize dwarf mosaic virus AY618417.1 2 20050416 209854 Maize fine streak virus DQ186554.1 2 20080824 348823 Maize Iranian mosaic virus AY618418.1 3 20050922 279896 Maize mosaic virus AF265566.1 2 20050415 59749 Maize rayado fino virus JQ624879.1 3 20120809 1182518 Maize streak Reunion virus isolate MSRV-RE_StP_PR52_2009 EF015778.1 2 20070214 10821 Maize streak virus isolate MSV-UWak56 AF329878.1 4 20050415 268316 Maize streak virus - A[Ama] X01089.1 9 20050418 268319 Maize streak virus - A[Kenya] X01633.1 11 20050418 268326 Maize streak virus - A[Nigeria1] AF329886.1 4 20050415 268330 Maize streak virus - B[Mom] AF329888.1 4 20050415 268331 Maize streak virus - E[Pat] AJ224504.1 6 20050415 268332 Maize streak virus - Reunion [N2AR2] AF329889.1 4 20050415 268343 Maize streak virus - [Raw] X94330.1 15 20050209 268315 Maize streak virus - [Reunion2] EF589670.1 1 20070604 445227 Maize white line mosaic virus KC921392.1 3 20130801 1341876 Maize yellow dwarf virus-RMV JQ941707.1 1 20120918 1229186 Malakal virus isolate SudAr 1169-64 KC412247.1 1 20130331 909208 Malpais Spring virus strain 85-488NM DQ660333.1 2 20071221 392174 Malva mosaic virus AM072289.1 2 20061115 339965 Malvastrum leaf curl betasatellite AM236780.1 3 20080326 377610 Malvastrum leaf curl Guangdong virus, isolate GD9 AM260699.1 2 20061211 329290 Malvastrum leaf curl virus, isolate G100 AJ971263.1 2 20061115 329291 Malvastrum leaf curl virus - [G87] isolate G87 AM260204.1 1 20061120 377463 Malvastrum yellow mosaic virus satellite DNA beta, isolate Hn44 AJ421482.1 4 20031023 221036 Malvastrum yellow vein betasatellite isolate Y47 FR715681.1 1 20101031 911574 Malvastrum yellow vein Changa Manga virus JN082236.1 1 20110817 222475 Malvastrum yellow vein virus isolate SC103 clone 21 AJ457824.1 6 20050415 222476 Malvastrum yellow vein virus-[Y47] JN082238.1 1 20110817 290030 Malvastrum yellow vein Yunnan virus isolate SC101 clone 10134 AJ786712.1 4 20050629 377611 Malvastrum yellow vein Yunnan virus satellite DNA beta L23513.1 5 20000304 12456 Human astrovirus 1 FJ755402.1 2 20100324 626160 Human astrovirus 1 Beijing/128/2005/CHN FJ755403.1 2 20100324 626164 Human astrovirus 1 Beijing/176/2006/CHN FJ755404.1 2 20100324 626180 Human astrovirus 1 Beijing/291/2007/CHN FJ755405.1 2 20100324 626181 Human astrovirus 1 Beijing/293/2007/CHN KF039911.1 2 20140713 12701 Human astrovirus 2 isolate Rus-Nsc06-1029 DQ070852.1 3 20060628 35300 Human astrovirus 4 DQ028633.1 3 20060628 35741 Human astrovirus 5 isolate Goiania/GO/12/94/Brazil GQ495608.1 2 20100407 37130 Human astrovirus 6 AF260508.1 2 20001218 43358 Human astrovirus 8 L13745.1 3 20000304 1239565 Mamastrovirus 1 serotype 2 KM017742.1 2 20141122 1239566 Mamastrovirus 2 isolate FAstV-D2 AY179509.1 3 20050416 1239574 Mamastrovirus 10 Y15937.2 6 20030331 1239577 Mamastrovirus 13 JX138237.1 1 20120822 78219 Mamestra brassicae multiple nucleopolyhedrovirus strain CHb1 U59461.2 5 20050901 207830 Mamestra configurata nucleopolyhedrovirus A strain 90/2 AF539999.1 3 20050415 207830 Mamestra configurata nucleopolyhedrovirus A strain 90/4 AY126275.1 3 20050416 204440 Mamestra configurata nucleopolyhedrovirus B EF095490.1 3 20090409 43140 Mapuera virus isolate BeAnn 370284 from Brazil HQ660076.1 1 20110622 1046251 Maraba virus from Brazil DQ356949.1 1 20061128 368736 Maracuja mosaic virus DQ447657.1 2 20060617 378830 Lake Victoria marburgvirus - Angola2005 strain Ang0214 EF446132.1 1 20071209 448086 Lake Victoria marburgvirus - Ci67 DQ447652.1 2 20060617 378831 Lake Victoria marburgvirus - DRC1999 strain 09DRC99 JN408064.1 2 20140725 1126254 Lake Victoria marburgvirus - Leiden JX458839.1 2 20130128 11269 Marburg marburgvirus isolate 16DRC2000 DQ217792.1 3 20060223 33727 Marburg virus - Musoke, Kenya, 1980 Z12132.1 25 20120220 33727 Marburg virus - Musoke, Kenya, 1980 DQ447649.1 2 20060617 378809 Ravn virus - Ravn, Kenya, 1987 EF198241.1 2 20070718 439015 Marine RNA virus JP-A EF198242.1 2 20070718 439016 Marine RNA virus JP-B EF198240.1 2 20070718 439014 Marine RNA virus SOG GU071086.1 2 20140623 694581 Marseillevirus marseillevirus strain T19 AF033815.1 8 20060111 11855 Mason-Pfizer monkey virus U85505.1 7 20110622 1048243 Simian endogenous retrovirus 1 clone 23.1 U85506.1 7 20110622 1048243 Simian endogenous retrovirus 1 clone 25.2 JN134185.1 1 20110705 1051323 Simian endogenous retrovirus vero ATCC CCL-81 isolate SRVcae M11841.1 5 20050417 11942 Simian retrovirus 1 isolate L47.1 AF126467.1 4 20050415 39068 Simian retrovirus 2 strain D2/RHE/OR M16605.1 6 20050417 39068 Simian retrovirus 2 AB588640.1 2 20110324 888441 Mastomys polyomavirus DNA, isolate: NR55 HQ712116.1 2 20110415 993034 Mavirus strain Spezl AF237947.1 2 20050415 59301 Mayaro virus KJ547646.1 1 20140717 1521385 McMurdo Ice Shelf pond-associated circular DNA virus-1 isolate alg49-15 KJ547647.1 1 20140717 1521386 McMurdo Ice Shelf pond-associated circular DNA virus-2 isolate alg49-66 KJ547648.1 1 20140717 1521387 McMurdo Ice Shelf pond-associated circular DNA virus-3 isolate alg49-39 KJ547649.1 1 20140717 1521388 McMurdo Ice Shelf pond-associated circular DNA virus-4 isolate alg49-63 KJ547650.1 1 20140717 1521389 McMurdo Ice Shelf pond-associated circular DNA virus-5 isolate alg49-117 KJ547651.1 1 20140717 1521390 McMurdo Ice Shelf pond-associated circular DNA virus-6 isolate alg49-69 KJ547652.1 1 20140717 1521391 McMurdo Ice Shelf pond-associated circular DNA virus-7 isolate alg49-129 KJ547653.1 1 20140717 1521392 McMurdo Ice Shelf pond-associated circular DNA virus-8 isolate alg49-57 K01711.1 9 20050417 11234 Measles virus KC164757.1 1 20121205 170525 Measles virus genotype D4 strain MVi/Treviso.ITA/03.10/1[D4] KJ410048.1 2 20140424 170528 Measles virus genotype D8 strain MVi/Muenchen.DEU/19.13[D8] KC164758.1 1 20121205 1056492 Measles virus genotype G3 strain MVi/Venice.ITA/06.11/1[G3] KJ018970.2 2 20150314 763792 Measles virus genotype H1 strain MVi/BritishColumbia.CAN/12.10/1[H1] AY486084.1 2 20050416 70149 Measles virus strain Edmonston-Zagreb JN635406.1 2 20120127 884096 Measles virus strain MVi/Arizona.USA/11.08/2 JN635409.1 2 20120127 884099 Measles virus strain MVi/California.USA/8.04 JN635410.1 2 20120127 884100 Measles virus strain MVi/California.USA/16.03 JN635403.1 2 20120127 884094 Measles virus strain MVi/Florida.USA/19.09 JN635408.1 2 20120127 884098 Measles virus strain MVi/New Jersey.USA/45.05 JN635402.1 2 20120127 884093 Measles virus strain MVi/New York.USA/26.09/3 JN635411.1 2 20120127 884101 Measles virus strain MVi/Pennsylvania.USA/20.09 JN635407.1 2 20120127 884097 Measles virus strain MVi/Texas.USA/4.07 JN635404.1 2 20120127 884095 Measles virus strain MVi/Virginia.USA/15.09 JN635405.1 2 20120127 1089795 Measles virus strain MVi/Washington.USA/18.08/1 JN258408.1 2 20111020 1094892 Megavirus chiliensis JX975216.1 2 20140417 1128140 Megavirus courdo11 JX885207.1 2 20140403 1235314 Megavirus lba isolate LBA111 AF063866.1 2 20050415 83191 Melanoplus sanguinipes entomopoxvirus KM275475.1 1 20141020 1560514 Melbournevirus isolate 1 AF291866.1 3 20050415 37108 Meleagrid herpesvirus 1 JQ085285.1 2 20120205 1128073 Meles meles circovirus-like virus JN704610.1 2 20120205 1128422 Meles meles fecal virus isolate VS4700006 KP644239.1 1 20150210 1608323 Meles meles polyomavirus 1 isolate UK EU000534.1 1 20080601 471717 Melon aphid-borne yellows virus M29671.1 8 20050417 11987 Melon necrotic spot virus AB061774.1 2 20090130 89471 Melon yellow spot virus segment L AB061773.1 3 20090130 89471 Melon yellow spot virus segment M AB038343.1 6 20030707 89471 Melon yellow spot virus segment S JX112711.1 1 20121204 152219 Menangle virus isolate Australia/bat/2009/Cedar Grove JQ957873.1 2 20130512 1286141 Meno virus strain E9/CI/2004 EU375803.1 2 20080309 493803 Merkel cell polyomavirus HG530538.1 1 20131022 1408129 Mesocricetus auratus papillomavirus 1 isolate APV10 HG939559.1 3 20140417 1487796 Phodopus sungorus papillomavirus type 1 HE578897.1 1 20110809 360579 Mesta yellow vein mosaic virus, clone FQ-1 FR751515.1 2 20110707 943084 Micro Torque teno virus, isolate microTTV-HD14.2 (zpr4.B6.125) HM004429.1 1 20101130 880161 Micromonas sp. RCC1109 virus MpV1 AY875681.1 3 20060422 53988 Microplitis demolitor bracovirus segment C AY875683.1 3 20060422 53988 Microplitis demolitor bracovirus segment D AY875680.2 3 20080819 53988 Microplitis demolitor bracovirus segment E AY875682.1 4 20091109 53988 Microplitis demolitor bracovirus segment F AY875684.1 4 20091109 53988 Microplitis demolitor bracovirus segment G AY875685.1 4 20091109 53988 Microplitis demolitor bracovirus segment H AY875686.1 4 20091109 53988 Microplitis demolitor bracovirus segment J AY875687.1 2 20060422 53988 Microplitis demolitor bracovirus segment K AY875690.1 2 20060422 53988 Microplitis demolitor bracovirus segment L AY875688.1 2 20060422 53988 Microplitis demolitor bracovirus segment M AY875689.1 4 20091109 53988 Microplitis demolitor bracovirus segment N DQ000240.1 2 20060422 53988 Microplitis demolitor bracovirus segment O KM115530.1 1 20140911 11023 Middelburg virus isolate ArB-8422 KC164505.2 3 20130715 1263720 Betacoronavirus England 1 KJ473821.1 3 20140725 1495253 BtVs-BetaCoV/SC2013 JX869059.2 3 20121205 1235996 Human betacoronavirus 2c EMC/2012 KC667074.1 2 20130501 1298362 Human betacoronavirus 2c England-Qatar/2012 KC776174.1 1 20130325 1306931 Human betacoronavirus 2c Jordan-N3/2012 KF186565.1 2 20140725 1335626 Middle East respiratory syndrome coronavirus isolate Al-Hasa_3_2013 FJ554525.1 1 20090518 644609 Midway nyavirus isolate RML47153 KM110936.1 2 20141115 1546177 Mikumi yellow baboon virus 1 isolate MYBV_M28 AB000920.1 7 20140218 1455651 Milk vetch dwarf C1 alphasatellite segment 1 AB000921.1 7 20140218 1455653 Milk vetch dwarf C2 alphasatellite segment 2 AB000922.1 7 20140218 1455654 Milk vetch dwarf C3 alphasatellite segment 3 AB009047.1 7 20140218 1455652 Milk vetch dwarf C10 alphasatellite segment 10 AB000923.1 6 20080621 67585 Milk vetch dwarf virus segment 4 AB000924.1 6 20080621 67585 Milk vetch dwarf virus segment 5 AB000925.1 6 20080621 67585 Milk vetch dwarf virus segment 6 AB000926.1 6 20080621 67585 Milk vetch dwarf virus segment 7 AB000927.1 6 20080621 67585 Milk vetch dwarf virus segment 8 AB009046.1 6 20081213 67585 Milk vetch dwarf virus segment 9 AB027511.1 3 20030529 67585 Milk vetch dwarf virus segment 11 EU420139.1 2 20080422 694001 Miniopterus bat coronavirus HKU8 JX520661.1 2 20130326 1273090 Miniopterus polyomavirus isolate KY369 JQ814848.1 3 20120927 1195364 Miniopterus schreibersii papillomavirus 1 JX847605.1 1 20121204 154122 Mink calicivirus strain MCV-DL/2007/CN KJ020099.1 2 20140912 1475143 Mink circovirus strain MiCV-DL13 AY792620.1 4 20050819 300740 Mint virus 1 AY789138.1 7 20051222 301865 Mint virus X JN039374.1 2 20111115 1093773 Mirabilis jalapa mottle virus AF454635.1 2 20050415 194445 Mirabilis mosaic virus AF525933.1 2 20081216 200255 Mirafiori lettuce big-vein virus RNA 1 AF525934.1 3 20081216 200255 Mirafiori lettuce big-vein virus RNA 2 AF525935.1 2 20081216 200255 Mirafiori lettuce big-vein virus RNA 3 AF525936.1 2 20090110 200255 Mirafiori lettuce big-vein virus RNA 4 D01030.1 6 20071218 268776 Miscanthus streak virus - [91] JQ814851.1 3 20120927 1195365 Miniopterus schreibersii picornavirus 1 DQ328876.1 4 20080815 55097 Mobala virus segment L AY342390.1 4 20080815 55097 Mobala virus segment S AJ242984.1 4 20050415 64300 Modoc virus KF278639.1 2 20140530 1474807 Mojiang virus isolate Tongguan1 EU293117.1 1 20080516 12538 Mokola virus U60315.1 4 20050418 10280 Molluscum contagiosum virus subtype 1 AF033813.1 4 20050415 11809 Moloney murine sarcoma virus KP263544.1 1 20150405 1634485 Mongoose feces-associated gemycircularvirus a strain 181a KP263545.1 1 20150405 1634486 Mongoose feces-associated gemycircularvirus b strain 160b KP263546.1 2 20150409 1634488 Mongoose feces-associated gemycircularvirus c strain 541c KP263547.1 1 20150405 1634487 Mongoose feces-associated gemycircularvirus d strain 478d HM172544.1 1 20100726 10244 Monkeypox virus AF380138.1 4 20090305 619591 Monkeypox virus Zaire-96-I-16 DQ328875.1 4 20080815 11629 Mopeia virus segment L DQ328874.1 4 20080815 11629 Mopeia virus segment S AY772169.1 1 20041115 300175 Mopeia virus AN20410 segment L AY772170.1 1 20041115 300175 Mopeia virus AN20410 segment S JN700748.1 1 20120703 167947 Lettuce necrotic stunt virus isolate L2 JX197071.1 4 20140515 208086 Moroccan pepper virus isolate MPV-PM75 EF579955.1 2 20080306 167129 Moroccan watermelon mosaic virus KF958461.1 3 20141105 1481453 Mosavirus A2 strain SZAL6-MoV/2011/HUN KM972725.1 2 20150403 1611039 Mosquito circovirus strain B19 GU452720.1 1 20110203 945962 Mosquito densovirus BR/07 KC464457.1 5 20140515 673515 Mosquito flavivirus isolate LSFlaviV-A20-09 HQ335082.1 2 20110622 1034790 Mosquito VEM Anellovirus SDBVL A HQ335083.1 2 20110622 1034791 Mosquito VEM Anellovirus SDBVL B HQ335084.1 2 20110622 1034792 Mosquito VEM Anellovirus SDRB A HQ335085.1 2 20110622 1034793 Mosquito VEM Anellovirus SDRB B HQ335086.1 2 20110622 1034805 Mosquito VEM virus SDBVL G HQ335087.1 2 20110622 1034806 Mosquito VEM virus SDRBAJ AY286409.1 1 20031230 241630 Mossman virus JX962719.1 1 20130110 1269028 Acanthamoeba polyphaga moumouvirus KC008572.1 1 20130225 1247379 UNVERIFIED: Moumouvirus goulette JF755422.1 2 20110928 1074210 Mouse astrovirus M-52/USA/2008 JF755427.1 2 20110928 1074213 Mouse kobuvirus M-5/USA/2010 AF033807.1 7 20060111 11757 Mouse mammary tumor virus DQ196319.1 1 20060528 344971 Mouse parvovirus 2 DQ196318.1 1 20060528 344970 Mouse parvovirus 3 FJ440683.1 1 20081216 576712 Mouse parvovirus 4a FJ445512.1 1 20081216 576713 Mouse parvovirus 4b FJ441297.1 1 20081216 576714 Mouse parvovirus 5a FJ985749.1 1 20091216 698672 Moussa virus HM777507.1 1 20101213 932662 Mud crab dicistrovirus KP303687.1 1 20150327 1631303 Mulberry mosaic dwarf associated virus isolate AK1-8 HQ660095.1 2 20120510 1112597 Bat Paramyxovirus Epo_spe/AR1/DRC/2009 AB040874.1 5 20060503 11161 Mumps virus AF314561.1 3 20050415 11161 Mumps virus strain Biken KM597072.1 1 20141020 1384672 Mumps virus genotype G strain MuV/Gabon/13/2[G] AF338106.1 2 20021218 11168 Mumps virus strain Jeryl Lynn AY685921.1 2 20041201 301186 Mumps virus strain L-Zagreb master seed AY685920.1 2 20041201 301186 Mumps virus strain L-Zagreb vaccine strain AM992618.1 3 20150307 223287 Mungbean yellow mosaic India virus, segment DNA-A AM992617.1 4 20150307 223287 Mungbean yellow mosaic India virus, segment DNA-B AF416742.1 4 20050415 223290 Mungbean yellow mosaic India virus-[Mungbean] DNA-A AF416741.1 3 20030529 223290 Mungbean yellow mosaic India virus-[Mungbean] DNA-B D14703.1 5 20070220 33726 Mungbean yellow mosaic virus DNA 1 D14704.1 5 20070220 33726 Mungbean yellow mosaic virus DNA 2 AJ132575.1 6 20150307 223295 Mungbean yellow mosaic virus-Vigna DNA A AJ132574.1 5 20150307 223295 Mungbean yellow mosaic virus-Vigna DNA B U06714.1 7 20061114 10583 Human papillomavirus type 1a X70828.1 3 20050418 28311 Human papillomavirus type 63 GU305914.1 1 20100302 10366 Murid herpesvirus 1 AM886412.1 2 20080613 69156 Murine cytomegalovirus (strain K181) EU579861.1 1 20080627 524649 Muromegalovirus C4A EU579859.1 1 20080627 524650 Muromegalovirus G4 EU579860.1 1 20080627 524651 Muromegalovirus WP15B AF232689.2 4 20050415 79700 Rat cytomegalovirus Maastricht AF105037.1 5 20081001 33708 Murid herpesvirus 4 strain g2.4 U97553.2 3 20060919 33708 Murid herpesvirus 4 strain WUMS GQ169129.1 2 20100319 432370 Wood mouse herpesvirus JX867617.1 2 20150422 1261657 Murid herpesvirus 8 isolate England JX544744.1 2 20121024 1141625 Murine astrovirus strain STL 2 JX169867.1 2 20140928 694005 Murine coronavirus strain JHM.WU FJ647225.1 1 20090325 591071 Murine coronavirus inf-MHV-A59 FJ647223.1 1 20090325 502106 Murine coronavirus MHV-1 FJ647224.1 1 20090325 502104 Murine coronavirus MHV-3 FJ647226.1 1 20090325 591068 Murine coronavirus MHV-JHM.IA FJ647218.1 1 20090325 591069 Murine coronavirus RA59/R13 FJ647220.1 1 20090325 502107 Murine coronavirus RA59/SJHM FJ647221.1 1 20090325 429331 Murine coronavirus repA59/RJHM FJ647227.1 1 20090325 429330 Murine coronavirus repJHM/RA59 FJ647219.1 1 20090325 591070 Murine coronavirus RJHM/A FJ647222.1 1 20090325 430472 Murine coronavirus SA59/RJHM AY700211.1 4 20081118 11138 Murine hepatitis virus strain A59 AF201929.1 4 20050415 76344 Murine hepatitis virus strain 2 FJ884686.1 1 20090422 11142 Murine hepatitis virus strain A59 JQ173883.1 1 20120325 1163669 Murine hepatitis virus strain S/3239-17 JF792616.1 1 20120503 31632 Rat coronavirus isolate 681 FJ938068.1 1 20090713 502102 Rat coronavirus Parker J01998.1 5 20061114 11791 AKR (endogenous) murine leukemia virus AF411814.1 5 20081118 188539 Amphotropic murine leukemia virus X57540.1 7 20061114 11792 Cas-Br-E murine leukemia virus AF221065.1 3 20050415 114654 DG-75 Murine leukemia virus KJ668270.1 1 20140626 1511762 Ecotropic murine leukemia virus Z11128.1 8 20050418 11795 Friend murine leukemia virus AF033811.1 4 20050415 11801 Moloney murine leukemia virus AF462057.1 7 20061114 11801 Moloney murine leukemia virus neuropathogenic variant ts1-92b AB187566.2 5 20120224 11786 Murine leukemia virus Graffi GV-1.4 HQ246218.1 1 20101214 933438 Murine leukemia virus N417 X94150.1 2 20050418 44561 Murine type C retrovirus AF053745.1 3 20050415 75986 Mus dunni endogenous virus KJ668271.1 1 20140626 1511763 Polytropic murine leukemia virus U94692.1 5 20071101 11938 Rauscher murine leukemia virus JF908815.1 1 20110622 11837 Xenotropic murine leukemia virus isolate VCaP FN692043.2 4 20110603 749340 Xenotropic MuLV-related virus 22Rv1/CWR-R1 JF274252.1 1 20110629 1049224 Xenotropic MuLV-related virus RKO DQ241301.1 1 20060223 356663 Xenotropic MuLV-related virus VP35 DQ241302.1 1 20060223 356664 Xenotropic MuLV-related virus VP42 DQ399707.1 1 20060302 373193 Xenotropic MuLV-related virus VP62 HQ154630.1 2 20130313 438045 XMRV, isolate xmlv15 HM049560.1 2 20110908 931972 Murine adenovirus 2, isolate K87 EU835513.1 1 20090422 573199 Murine adenovirus 3 DQ911368.1 2 20061006 357231 Murine norovirus strain Berlin/04/06/DE EF014462.1 4 20070828 223997 Murine norovirus 1 isolate MNV-1.CW3 KC792553.1 2 20130924 351048 Murine norovirus 3 clone P6 EU004672.1 2 20070920 463718 Murine norovirus GV/CR1/2005/USA EU004673.1 2 20070920 463719 Murine norovirus GV/CR3/2005/USA EU004674.1 2 20070920 463720 Murine norovirus GV/CR4/2005/USA EU004675.1 2 20070920 463721 Murine norovirus GV/CR5/2005/USA EU004676.1 2 20070920 463722 Murine norovirus GV/CR6/2005/USA EU004677.1 2 20070920 463723 Murine norovirus GV/CR7/2005/USA EU004678.1 2 20070920 463724 Murine norovirus GV/CR10/2005/USA EU004679.1 2 20070920 463725 Murine norovirus GV/CR11/2005/USA EU004680.1 2 20070920 463726 Murine norovirus GV/CR13/2005/USA EU004681.1 2 20070920 463727 Murine norovirus GV/CR15/2005/USA EU004682.1 2 20070920 463728 Murine norovirus GV/CR17/2005/USA EU004683.1 2 20070920 463729 Murine norovirus GV/CR18/2005/DEU JF320644.1 1 20110509 1028321 Murine norovirus GV/NIH-2409/2005/USA JF320645.1 1 20110509 1028322 Murine norovirus GV/NIH-2410/2005/USA JF320646.1 1 20110509 1028323 Murine norovirus GV/NIH-2411/2005/USA JF320647.1 1 20110509 1028324 Murine norovirus GV/NIH-2747/2005/USA JF320648.1 1 20110509 1028325 Murine norovirus GV/NIH-2750/2005/USA JF320649.1 1 20110509 1028326 Murine norovirus GV/NIH-4421/2005/USA JF320650.1 1 20110509 1028327 Murine norovirus GV/NIH-4428/2005/USA JF320651.1 1 20110509 1028328 Murine norovirus GV/NIH-4431/2005/USA JF320652.1 1 20110509 1028329 Murine norovirus GV/NIH-A114/2006/USA JF320653.1 1 20110509 1028330 Murine norovirus GV/NIH-D220/2007/USA EU004663.1 2 20070920 463709 Murine norovirus GV/WU11/2005/USA EU004664.1 2 20070920 463710 Murine norovirus GV/WU12/2005/USA EU004665.1 2 20070920 463711 Murine norovirus GV/WU20/2005/USA EU004666.1 2 20070920 463712 Murine norovirus GV/WU21/2005/USA EU004667.1 2 20070920 463713 Murine norovirus GV/WU22/2005/USA EU004668.1 2 20070920 463714 Murine norovirus GV/WU23/2005/USA EU004669.1 2 20070920 463715 Murine norovirus GV/WU24/2005/USA EU004670.1 2 20070920 463716 Murine norovirus GV/WU25/2005/USA EU004671.1 2 20070920 463717 Murine norovirus GV/WU26/2005/USA K02712.2 9 20050417 11806 FBR murine osteosarcoma virus AF033814.1 4 20050415 11830 Murine osteosarcoma virus AY729016.1 1 20050510 11263 Murine pneumonia virus AY743910.1 3 20050416 296738 Pneumonia virus of mice 15 AY743909.1 3 20050416 270473 Pneumonia virus of mice J3666 M55904.2 8 20050417 229278 Murine pneumotropic virus J02288.1 15 20061114 10636 Murine polyomavirus strain A2 AF442959.1 3 20061114 179241 Murine polyomavirus strain BG AY898809.1 2 20060125 44017 Alfuy virus strain MRM3929 AF161266.1 3 20050415 11079 Murray Valley encephalitis virus DQ366147.1 1 20060501 10090 Mus musculus endogenous ecotropic murine leukemia virus 1 EU522111.1 5 20090501 523909 Musca domestica salivary gland hypertrophy virus U07551.1 3 19990902 32625 Mushroom bacilliform virus JX262162.1 2 20120913 1208309 Human polyomavirus 10 isolate 10ww JQ898292.1 2 20120913 1203539 MW polyomavirus strain WD976 JX259273.1 2 20121005 1231709 MX polyomavirus isolate UC-MXPyV-1 JQ814850.1 3 20120927 1195367 Myotis myotis bocavirus 1 JQ814847.1 3 20120927 1195370 Myotis ricketti papillomavirus 1 HF679134.1 3 20150227 1293572 Mythimna separata entomopoxvirus 'L' AF170726.2 6 20051216 10273 Myxoma virus GQ374450.1 1 20090827 96892 Nanovirus-like particle AM158439.1 1 20060720 160844 Narcissus common latent virus isolate Zhangzhou AM182028.1 1 20070123 394036 Narcissus degeneration virus JQ395041.1 2 20120805 394036 Narcissus degeneration virus isolate Marijiniup 2 JQ326210.1 1 20120606 160842 Narcissus late season yellows virus isolate Zhangzhou D13747.1 6 20071101 12180 Narcissus mosaic virus AM182569.2 1 20061024 367682 Narcissus symptomless virus isolate Hangzhou-2005 JQ911732.1 3 20140515 160843 Narcissus yellow stripe virus isolate ZZ-2 FJ362497.2 3 20120517 590647 Nariva virus HM147989.1 1 20120227 59302 Ndumu virus JX018212.1 2 20130110 1212483 Nebovirus Bo/M3641/2011/HUN DQ317692.1 1 20060705 204507 Neodiprion abietis NPV AY349019.1 5 20061114 249151 Neodiprion lecontei nucleopolyhedrovirus AY430810.1 2 20050416 111874 Neodiprion sertifer nucleopolyhedrovirus JQ898333.2 3 20121024 1224510 Nepavirus isolate NepaV JQ395043.1 2 20120805 797075 Nerine latent virus isolate Marijiniup 4 AB219105.1 1 20051221 333348 Nerine virus X KF954417.1 1 20140513 1497391 New Jersey polyomavirus-2013 isolate NJ-PyV-2013 JN819486.1 1 20120226 1149871 New World begomovirus associated satellite DNA isolate 177H3 JN819487.1 1 20120226 1149872 New World begomovirus associated satellite DNA isolate 177N2 JN819488.1 1 20120226 1149873 New World begomovirus associated satellite DNA isolate 177N4 JN819489.1 1 20120226 1149874 New World begomovirus associated satellite DNA isolate 177N7 JN819490.1 1 20120226 1149875 New World begomovirus associated satellite DNA isolate 228H1 JN819491.1 1 20120226 1149876 New World begomovirus associated satellite DNA isolate 228H3 JN819492.1 1 20120226 1149877 New World begomovirus associated satellite DNA isolate 228H5 JN819493.1 1 20120226 1149878 New World begomovirus associated satellite DNA isolate 228H6 JN819494.1 1 20120226 1149879 New World begomovirus associated satellite DNA isolate 228H6B JN819495.1 1 20120227 1149880 New World begomovirus associated satellite DNA isolate 404N1 JN819496.1 1 20120227 1149881 New World begomovirus associated satellite DNA isolate 404N2 JN819497.1 1 20120227 1149882 New World begomovirus associated satellite DNA isolate 404N3 JN819498.1 1 20120226 1149883 New World begomovirus associated satellite DNA isolate 412N1 JN819506.1 1 20120226 1149884 New World begomovirus associated satellite DNA isolate 412N2 JN819499.1 1 20120226 1149885 New World begomovirus associated satellite DNA isolate 412N3 JN819507.1 1 20120226 1149886 New World begomovirus associated satellite DNA isolate 413N1 JN819500.1 1 20120226 1149887 New World begomovirus associated satellite DNA isolate 413N2 JN819501.1 1 20120226 1149888 New World begomovirus associated satellite DNA isolate 413N3 JN819502.1 1 20120226 1149889 New World begomovirus associated satellite DNA isolate 413N5 JN819503.1 1 20120226 1149890 New World begomovirus associated satellite DNA isolate 414N1 JN819504.1 1 20120226 1149891 New World begomovirus associated satellite DNA isolate 414N2 JN819505.1 1 20120226 1149892 New World begomovirus associated satellite DNA isolate 414N3 JN819508.1 1 20120226 1149893 New World begomovirus associated satellite DNA isolate 424N1 JN819509.1 1 20120226 1149894 New World begomovirus associated satellite DNA isolate 424N2 JN819510.1 1 20120226 1149895 New World begomovirus associated satellite DNA isolate 424N3 JN986808.1 1 20120226 1150019 New World begomovirus associated satellite DNA isolate H1 DQ013304.1 2 20060616 331642 Newbury agent 1 AF077761.1 4 20050415 11176 Newcastle disease virus AF431744.3 7 20070706 11176 Newcastle disease virus strain ZJ1 AF309418.1 2 20050415 139270 Newcastle disease virus B1 AJ880277.1 2 20060313 159079 Pigeon paramyxovirus 1 FJ715959.1 4 20100308 318846 Ngaingan virus KJ210048.1 4 20141122 1485186 Nhumirim virus strain BrMS-MQ10 KC585008.1 3 20130912 1348439 Niakha virus isolate DakArD 88909 JQ957875.1 1 20140604 1286143 Nienokoue virus isolate B51/CI/2004 JQ065047.1 1 20120320 1159904 Night-heron coronavirus HKU19 strain HKU19-6918 AB766259.1 2 20130825 1267585 Nilaparvata lugens honeydew virus 1 isolate: Izumo AB826459.1 1 20140402 1345661 Nilaparvata lugens honeydew virus-2 genomic RNA, isolate: Izumo AB826460.1 1 20140402 1345662 Nilaparvata lugens honeydew virus-3 genomic RNA, isolate: Kagoshima D49693.1 8 20060922 33724 Nilaparvata lugens reovirus segment S1 D49694.1 9 20060922 33724 Nilaparvata lugens reovirus segment S2 D49695.1 9 20060922 33724 Nilaparvata lugens reovirus segment S3 D49696.1 9 20060922 33724 Nilaparvata lugens reovirus segment S4 D49697.1 9 20060922 33724 Nilaparvata lugens reovirus segment S5 D49698.1 9 20060922 33724 Nilaparvata lugens reovirus segment S6 D49699.1 9 20060922 33724 Nilaparvata lugens reovirus segment S7 D26127.1 8 20030707 33724 Nilaparvata lugens reovirus segment S8 D49700.1 9 20060922 33724 Nilaparvata lugens reovirus segment S9 D14691.1 7 20030707 33724 Nilaparvata lugens reovirus segment S10 DQ356948.1 3 20130128 1285600 Nile crocodilepox virus JQ898332.2 3 20121024 1229325 Niminivirus isolate NimiV AF212302.2 5 20050415 121791 Nipah virus AF174533.1 3 20030620 12288 Nodamura virus RNA1 EF207438.1 2 20071101 283876 Nootka lupine vein clearing virus DQ321720.2 4 20090612 363716 Nora virus AB030277.1 4 20050114 100880 Northern cereal mosaic virus AF145896.1 3 20050415 94433 Camberwell virus AB042808.1 4 20050414 99565 Chiba virus AY032605.1 3 20050416 158465 Human calicivirus Hu/NLV/GII/MD145-12/1987/US AY485642.1 2 20050416 258453 Human calicivirus NLV/GII/Langen1061/2002/DE X86557.1 11 20050418 82658 Lordsdale virus JF781268.1 1 20120320 1160949 Norovirus cat/GIV.2/CU081210E/USA/2010 KJ196292.1 1 20140811 1529909 Norovirus GI/Hu/JP/2007/GI.P3_GI.3/Shimizu/KK2866 KJ196298.1 1 20140811 1529910 Norovirus GI/Hu/JP/2007/GI.P8_GII.8/Nagoya/KY531 KP998539.1 1 20150416 552592 Norovirus GII.17 isolate GII/Hu/HKG/2014/GII.17/CUHK-NS-463 KJ649705.1 1 20140702 1514999 Norovirus GII/Hu/HKG/2013/GII.4/CUHK-NS-141 KJ196294.1 1 20140811 1529911 Norovirus GII/Hu/JP/2000/GII.P12_GII.12/Saitama/KU16 KJ196282.1 1 20140811 1529912 Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T15 KJ196299.1 1 20140811 1529913 Norovirus GII/Hu/JP/2001/GII.P12_GII.12/Saitama/T18 KJ196277.1 1 20140811 1529914 Norovirus GII/Hu/JP/2001/GII.P22_GII.5/Saitama/T49 KJ196288.1 1 20140811 1529917 Norovirus GII/Hu/JP/2002/GII.P5_GII.5/Saitama/T52 KJ196276.1 1 20140811 1529915 Norovirus GII/Hu/JP/2002/GII.P12_GII.13/Saitama/T80 KJ196286.1 1 20140811 1529916 Norovirus GII/Hu/JP/2002/GII.P16_GII.17/Saitama/T87 KJ196297.1 1 20140811 1529920 Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Fukuoka/KK282 KJ196278.1 1 20140811 1529921 Norovirus GII/Hu/JP/2007/GII.P7_GII.14/Sendai/YG99 KJ196290.1 1 20140811 1529918 Norovirus GII/Hu/JP/2007/GII.P15_GII.15/Sapporo/HK299 KJ196284.1 1 20140811 1529919 Norovirus GII/Hu/JP/2007/GII.P21_GII.21/Kawasaki/YO284 KJ196287.1 1 20140811 1529922 Norovirus GII/Hu/JP/2010/GII.P4_GII.4/Shimada/ASC96 KJ196295.1 1 20140811 1529923 Norovirus GII/Hu/JP/2010/GII.P7_GII.7/Musashimurayama/TAKAsanKimchi KJ196291.1 1 20140811 1529924 Norovirus GII/Hu/JP/2011/GII/Yuzawa/Gira2HS KJ196293.1 1 20140811 1529925 Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/1 KJ196280.1 1 20140811 1529926 Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/2 KJ196279.1 1 20140811 1529927 Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/3 KJ196281.1 1 20140811 1529928 Norovirus GII/Hu/JP/2012/GII.Pe_GII.4_Sydney2012/Fukuyama/5 KJ196296.1 1 20140811 1529929 Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/105 KJ196283.1 1 20140811 1529930 Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/106 KJ196285.1 1 20140811 1529931 Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/108 KJ196289.1 1 20140811 1529932 Norovirus GII/Hu/TW/2012/GII.Pe_GII.4_Sydney2012/Taipei/109 AB220921.1 1 20060722 336619 Norovirus Hu/Chiba/04-1050/2005/JP KF429773.1 1 20130814 1383577 Norovirus Hu/GI.1/8CKIIIc/1974/USA JX023285.1 2 20120924 1184498 Norovirus Hu/GI.1/8FIIa/1968/USA KF429783.1 1 20130814 1383578 Norovirus Hu/GI.1/8K/1979/USA KF429789.1 1 20130814 1383579 Norovirus Hu/GI.1/8MC/1978/USA KF429770.1 1 20130814 1383580 Norovirus Hu/GI.1/8McIII/1973/USA KF429761.1 1 20130814 1383581 Norovirus Hu/GI.1/8MoIIIL/1972/USA KF429774.1 1 20130814 1383582 Norovirus Hu/GI.1/8UIIIf/1973/USA KF429765.1 2 20131025 1383583 Norovirus Hu/GI.1/8W/1968/USA KF306212.1 4 20140515 1406147 Norovirus Hu/GI.2/Jingzhou/2013401/CHN FJ515294.1 1 20100101 658397 Norovirus Hu/GI.2/Leuven/2003/BEL JQ388274.1 1 20120422 1173217 Norovirus Hu/GI.6/Kingston/ACT160D/2010/AU JQ911594.1 2 20120924 1175308 Norovirus Hu/GI/10360/2010/VNM AB187514.1 1 20050901 290280 Norovirus Hu/GI/Otofuke/1979/JP AB541201.1 1 20100803 707384 Norovirus Hu/GII-4/Aichi1/2007/JP AB541202.1 1 20100803 707385 Norovirus Hu/GII-4/Aichi1/2008/JP AB541203.1 1 20100803 707386 Norovirus Hu/GII-4/Aichi2/2007/JP AB541204.1 1 20100803 707387 Norovirus Hu/GII-4/Aichi2/2008/JP AB447446.1 2 20081106 546970 Norovirus Hu/GII-4/Aichi3/2006/JP AB541205.1 1 20100803 707388 Norovirus Hu/GII-4/Aichi3/2007/JP AB447447.1 2 20081106 546971 Norovirus Hu/GII-4/Aichi4/2006/JP AB447436.1 2 20081106 546960 Norovirus Hu/GII-4/Akita1/2006/JP AB447437.1 2 20081106 546961 Norovirus Hu/GII-4/Akita2/2006/JP AB447438.1 2 20081106 546962 Norovirus Hu/GII-4/Akita4/2006/JP AB447439.1 2 20081106 546963 Norovirus Hu/GII-4/Akita5/2006/JP AB447432.1 2 20081106 546956 Norovirus Hu/GII-4/Aomori1/2006/JP AB447433.1 2 20081106 546957 Norovirus Hu/GII-4/Aomori2/2006/JP AB447434.1 2 20081106 546958 Norovirus Hu/GII-4/Aomori4/2006/JP AB447435.1 2 20081106 546959 Norovirus Hu/GII-4/Aomori5/2006/JP JQ622197.1 3 20121109 1184496 Norovirus Hu/GII-4/CBNU2/2007/KR JN400599.1 2 20140102 1195613 Norovirus Hu/GII-4/CGMH01/2006/TW JN400600.1 2 20140102 1195614 Norovirus Hu/GII-4/CGMH02/2006/TW JN400601.1 2 20140102 1195615 Norovirus Hu/GII-4/CGMH03/2006/TW JN400602.1 2 20140102 1195616 Norovirus Hu/GII-4/CGMH04/2006/TW JN400603.1 2 20140102 1195617 Norovirus Hu/GII-4/CGMH05/2006/TW JN400604.1 2 20140102 1195618 Norovirus Hu/GII-4/CGMH06/2006/TW JN400605.1 2 20140102 1195619 Norovirus Hu/GII-4/CGMH07/2006/TW JN400606.1 2 20140102 1195620 Norovirus Hu/GII-4/CGMH08/2006/TW JN400607.1 2 20140102 1195621 Norovirus Hu/GII-4/CGMH09/2006/TW JN400608.1 2 20140102 1195622 Norovirus Hu/GII-4/CGMH10/2006/TW JN400609.1 2 20140102 1195623 Norovirus Hu/GII-4/CGMH11/2006/TW JN400610.1 2 20140102 1195624 Norovirus Hu/GII-4/CGMH12/2007/TW JN400611.1 2 20140102 1195625 Norovirus Hu/GII-4/CGMH13/2007/TW JN400612.1 2 20140102 1195626 Norovirus Hu/GII-4/CGMH14/2007/TW JN400613.1 2 20140102 1195627 Norovirus Hu/GII-4/CGMH15/2007/TW JN400614.1 2 20140102 1195628 Norovirus Hu/GII-4/CGMH16/2007/TW JN400615.1 2 20140102 1195629 Norovirus Hu/GII-4/CGMH17/2007/TW JN400616.1 2 20140102 1195630 Norovirus Hu/GII-4/CGMH18/2008/TW JN400617.1 2 20140102 1195631 Norovirus Hu/GII-4/CGMH19/2009/TW JN400618.2 3 20140115 1195632 Norovirus Hu/GII-4/CGMH20/2009/TW JN400619.2 3 20140115 1195633 Norovirus Hu/GII-4/CGMH21/2010/TW JN400620.1 2 20140102 1195634 Norovirus Hu/GII-4/CGMH22/2010/TW JN400621.1 2 20140102 1195635 Norovirus Hu/GII-4/CGMH23/2010/TW JN400622.1 2 20140102 1195636 Norovirus Hu/GII-4/CGMH24/2010/TW JN400623.1 2 20140102 1195637 Norovirus Hu/GII-4/CGMH25/2010/TW JN400624.1 2 20140102 1195638 Norovirus Hu/GII-4/CGMH26/2010/TW JN400625.1 2 20140102 1195639 Norovirus Hu/GII-4/CGMH27/2010/TW JN400626.1 2 20140102 1195640 Norovirus Hu/GII-4/CGMH28/2010/TW FJ514242.1 2 20110419 587432 Norovirus Hu/GII-4/CUK-3/2008/KR AB447453.1 2 20081106 546977 Norovirus Hu/GII-4/Ehime1/2006/JP AB447454.1 2 20081106 546978 Norovirus Hu/GII-4/Ehime2/2006/JP AB447455.1 2 20081106 546979 Norovirus Hu/GII-4/Ehime5/2006/JP AB543808.1 1 20100217 714567 Norovirus Hu/GII-4/FUMI/2010/JP AB447451.1 2 20081106 546975 Norovirus Hu/GII-4/Hiroshima1/2006/JP AB447452.1 2 20081106 546976 Norovirus Hu/GII-4/Hiroshima2/2006/JP AB447427.1 2 20081106 546951 Norovirus Hu/GII-4/Hokkaido1/2006/JP AB447428.1 2 20081106 546952 Norovirus Hu/GII-4/Hokkaido2/2006/JP AB447429.1 2 20081106 546953 Norovirus Hu/GII-4/Hokkaido3/2006/JP AB447430.1 2 20081106 546954 Norovirus Hu/GII-4/Hokkaido4/2006/JP AB447431.1 2 20081106 546955 Norovirus Hu/GII-4/Hokkaido5/2006/JP AB447459.1 2 20081106 546983 Norovirus Hu/GII-4/Kumamoto1/2006/JP AB447460.1 2 20081106 546984 Norovirus Hu/GII-4/Kumamoto2/2006/JP AB447461.1 2 20081106 546985 Norovirus Hu/GII-4/Kumamoto3/2006/JP AB447462.1 2 20081106 546986 Norovirus Hu/GII-4/Kumamoto4/2006/JP AB447463.1 2 20081106 546987 Norovirus Hu/GII-4/Kumamoto5/2006/JP AB447440.1 2 20081106 546964 Norovirus Hu/GII-4/Miyagi2/2006/JP AB447441.1 2 20081106 546965 Norovirus Hu/GII-4/Miyagi4/2006/JP AB447442.1 2 20081106 546966 Norovirus Hu/GII-4/Miyagi5/2006/JP AB447456.2 3 20140408 546980 Norovirus Hu/GII-4/Saga1/2006/JP AB447457.1 2 20081106 546981 Norovirus Hu/GII-4/Saga4/2006/JP AB447458.1 2 20081106 546982 Norovirus Hu/GII-4/Saga5/2006/JP AB447448.1 2 20081106 546972 Norovirus Hu/GII-4/Sakai2/2006/JP AB447449.1 2 20081106 546973 Norovirus Hu/GII-4/Sakai3/2006/JP AB447450.1 2 20081106 546974 Norovirus Hu/GII-4/Sakai4/2006/JP AB447443.1 2 20081106 546967 Norovirus Hu/GII-4/Toyama1/2006/JP AB447444.1 2 20081106 546968 Norovirus Hu/GII-4/Toyama4/2006/JP AB447445.1 2 20081106 546969 Norovirus Hu/GII-4/Toyama5/2006/JP KJ407074.2 4 20150131 1458701 Norovirus Hu/GII.2/HS255/2011/USA GU980585.1 2 20100811 863240 Norovirus Hu/GII.3/CBNU1/2006/KOR JX846924.1 3 20131025 1260941 Norovirus Hu/GII.3/HK71/1978/CHN KF306213.1 4 20140515 1406148 Norovirus Hu/GII.3/Jingzhou/2013402/CHN JQ798158.1 2 20120826 1195791 Norovirus Hu/GII.4/5M/USA/2004 KC960615.1 1 20130430 1325533 Norovirus Hu/GII.4/20199/2009/VNM JX459902.1 2 20130512 1241966 Norovirus Hu/GII.4/Berowra/NSW767L/2012/AU HF952119.1 2 20130618 1331832 Norovirus Hu/GII.4/C00006631/2011/UK HF952120.1 2 20130618 1331833 Norovirus Hu/GII.4/C00007876/2011/UK HF952121.1 2 20130618 1331834 Norovirus Hu/GII.4/C00007879/2011/UK HF952122.1 2 20130618 1331835 Norovirus Hu/GII.4/C00007880/2011/UK HF952123.1 2 20130618 1331836 Norovirus Hu/GII.4/C00007881/2011/UK HF952124.1 2 20130618 1331837 Norovirus Hu/GII.4/C00007892/2011/UK HF952125.1 2 20130618 1331838 Norovirus Hu/GII.4/C00007893/2011/UK HF952126.1 2 20130618 1331839 Norovirus Hu/GII.4/C00007904/2011/UK HF952127.1 2 20130618 1331840 Norovirus Hu/GII.4/C00007905/2011/UK HF952128.1 2 20130618 1331841 Norovirus Hu/GII.4/C00007915/2010/UK HF952129.1 2 20130618 1331842 Norovirus Hu/GII.4/C00007916/2011/UK HF952130.1 2 20130618 1331843 Norovirus Hu/GII.4/C00007918/2011/UK HF952131.1 2 20130618 1331844 Norovirus Hu/GII.4/C00007927/2010/UK HF952132.1 2 20130618 1331845 Norovirus Hu/GII.4/C00007928/2011/UK HF952133.1 2 20130618 1331846 Norovirus Hu/GII.4/C00007934/2010/UK HF952134.1 2 20130618 1331847 Norovirus Hu/GII.4/C00007941/2011/UK HF952135.1 2 20130618 1331848 Norovirus Hu/GII.4/C00007952/2011/UK JX459901.1 2 20130512 1241967 Norovirus Hu/GII.4/Caringbah/NSW409G/2011/AU FJ537135.1 2 20091104 660656 Norovirus Hu/GII.4/CHDC2094/1974/US FJ537136.1 2 20091104 660657 Norovirus Hu/GII.4/CHDC3967/1988/US FJ537137.1 2 20091104 660658 Norovirus Hu/GII.4/CHDC4108/1987/US FJ537138.1 2 20091104 660659 Norovirus Hu/GII.4/CHDC4871/1977/US JX023286.1 2 20120924 1184497 Norovirus Hu/GII.4/CHDC5191/1974/USA JX459904.1 2 20130512 1241968 Norovirus Hu/GII.4/Doonside/NSW536I/2011/AU KM272334.1 2 20150227 1566828 Norovirus Hu/GII.4/gg-12-08-04/2012/KR KC894942.1 1 20130804 1379486 Norovirus Hu/GII.4/Guangzhou/GZ2010-L88/CHN/2011 KC894943.1 1 20130804 1379487 Norovirus Hu/GII.4/Guangzhou/GZ2010-L91/CHN/2011 JX989073.1 3 20140511 1282423 Norovirus Hu/GII.4/GZ2010-L26/Guangzhou/CHN/2010 JX989074.1 3 20140511 1282425 Norovirus Hu/GII.4/GZ2010-L87/Guangzhou/CHN/2011 KC175323.1 2 20130226 1262401 Norovirus Hu/GII.4/Hong Kong/CUHK3630/2012/CHN KC631827.1 1 20130606 1337425 Norovirus Hu/GII.4/Hong Kong/CUHK6080/2012/CHN KJ407076.1 2 20150131 1458704 Norovirus Hu/GII.4/HS66/2001/USA KC013592.1 2 20130312 1268361 Norovirus Hu/GII.4/HS191/2004/USA KJ407075.1 2 20150131 1458702 Norovirus Hu/GII.4/HS288/2012/USA KJ407073.1 2 20150131 1458703 Norovirus Hu/GII.4/HS292/2012/USA JX459903.1 2 20130512 1241969 Norovirus Hu/GII.4/Jannali/NSW774M/2011/AU HQ009513.1 1 20100907 880562 Norovirus Hu/GII.4/JB-15/KOR/2008 KC577174.1 1 20131212 1432852 Norovirus Hu/GII.4/Jiangsu1/2011/CHN KC577175.1 1 20131212 1432853 Norovirus Hu/GII.4/Jiangsu2/2012/CHN KF306214.1 4 20140515 1406149 Norovirus Hu/GII.4/Jingzhou/2013403/CHN DQ658413.1 2 20070911 392172 Norovirus Hu/GII.4/MD-2004/2004/US JX459906.1 2 20130512 1241970 Norovirus Hu/GII.4/Miranda/NSW850K/2011/AU JN595867.1 1 20120122 1133122 Norovirus Hu/GII.4/New Orleans/2010/USA KF429768.1 2 20131025 1383602 Norovirus Hu/GII.4/NIHIC1.13/2012/USA KF712499.1 1 20131028 1406809 Norovirus Hu/GII.4/NIHIC1.16/2012/USA KF712510.1 1 20131028 1406797 Norovirus Hu/GII.4/NIHIC2.2/2010/USA KF712496.1 1 20131028 1406798 Norovirus Hu/GII.4/NIHIC2.3/2010/USA KF712504.1 1 20131028 1406799 Norovirus Hu/GII.4/NIHIC11.3/2013/USA KF429766.1 2 20131025 1383591 Norovirus Hu/GII.4/NIHIC13/2011/USA KF429776.1 2 20131025 1383599 Norovirus Hu/GII.4/NIHIC17.1/2012/USA KF429790.1 2 20131025 1383601 Norovirus Hu/GII.4/NIHIC17.5/2012/USA KF712501.1 1 20131028 1406805 Norovirus Hu/GII.4/NIHIC17.6/2012/USA KF712491.1 1 20131028 1406801 Norovirus Hu/GII.4/NIHIC17.8/2013/USA KF712498.1 1 20131028 1406802 Norovirus Hu/GII.4/NIHIC17.9/2013/USA KF429778.1 2 20131025 1383590 Norovirus Hu/GII.4/NIHIC18.1/2012/USA KF429777.1 2 20131025 1383596 Norovirus Hu/GII.4/NIHIC27.1/2012/USA KF712497.1 1 20131028 1406800 Norovirus Hu/GII.4/NIHIC27.2/2012/USA KF429760.1 2 20131025 1383609 Norovirus Hu/GII.4/NIHIC28.4/2012/USA KF429787.1 2 20131025 1383606 Norovirus Hu/GII.4/NIHIC28.5/2012/USA KF712502.1 1 20131028 1406796 Norovirus Hu/GII.4/NIHIC35/2013/USA JX126913.1 1 20120820 1221622 Norovirus Hu/GII.4/Ohio/7G/2012/USA JX126912.1 1 20120820 1221623 Norovirus Hu/GII.4/Ohio/7I/2012/USA KC463910.1 1 20130415 1316726 Norovirus Hu/GII.4/Ohio/684/USA JX459900.1 2 20130512 1241971 Norovirus Hu/GII.4/Randwick/NSW882J/2011/AU JX459905.1 2 20130512 1241972 Norovirus Hu/GII.4/Randwick/NSW938K/2011/AU JQ613570.1 2 20130512 1183312 Norovirus Hu/GII.4/Rockdale/NSW006D/2009/AU JX448566.1 1 20130731 1312076 Norovirus Hu/GII.4/Seoul/1071/2010/KOR KJ541743.1 1 20140523 1498296 Norovirus Hu/GII.4/SGU-110421/KOR/2011 JX459908.1 2 20130512 1241973 Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU JX459907.1 2 20130512 1241974 Norovirus Hu/GII.4/Woonona/NSW3309/2012/AU JX846927.1 6 20140515 1260944 Norovirus Hu/GII.6/CHDC4073/1984/USA JX989075.1 3 20140511 1282430 Norovirus Hu/GII.6/GZ2010-L96/Guangzhou/CHN/2011 KJ407072.2 4 20150131 1458705 Norovirus Hu/GII.6/HS245/2010/USA KC464496.1 2 20140102 1380573 Norovirus Hu/GII.12/CGMH38/2010/TW KC464497.1 2 20140102 1380574 Norovirus Hu/GII.12/CGMH39/2010/TW KC464498.1 2 20140102 1380575 Norovirus Hu/GII.12/CGMH40/2010/TW KC464499.1 2 20140102 1380576 Norovirus Hu/GII.12/CGMH41/2010/TW KC464500.1 2 20140102 1380577 Norovirus Hu/GII.12/CGMH42/2010/TW HQ664990.1 3 20110907 1046049 Norovirus Hu/GII.12/HS206/2010/USA HQ449728.1 2 20110907 934293 Norovirus Hu/GII.12/HS210/2010/USA GU594162.1 2 20130215 748172 Norovirus Hu/GII.14/8610/Saga/2008/JPN JQ613569.1 2 20140507 1183319 Norovirus Hu/GII.g-GII.12/Gunnedah/NSW895P/2010/AU JQ613568.1 2 20140507 1183320 Norovirus Hu/GII.g-GII.12/Wahroonga/NSW004P/2009/AU JQ911595.1 4 20130314 1175309 Norovirus Hu/GII/10002/2009/VNM JQ911596.1 4 20130314 1175310 Norovirus Hu/GII/10003/2009/VNM JQ911597.1 4 20130314 1175311 Norovirus Hu/GII/10012/2009/VNM JQ911598.1 4 20130314 1175312 Norovirus Hu/GII/10037/2009/VNM KC409301.1 2 20130222 1291872 Norovirus Hu/GII/20469/2010/VNM KC409302.1 2 20130222 1291873 Norovirus Hu/GII/20477/2010/VNM KJ685414.1 2 20150131 1486684 Norovirus Hu/GII/BG1C0004/2010/BGD KJ685408.1 2 20150131 1486685 Norovirus Hu/GII/BG1C0066/2011/BGD KJ685403.1 2 20150131 1486687 Norovirus Hu/GII/BG1C0204/2011/BGD KJ685415.1 2 20150131 1486689 Norovirus Hu/GII/BG1C0241-33/2011/BGD KJ685417.1 2 20150131 1486691 Norovirus Hu/GII/BG1C0270/2011/BGD KJ685405.1 2 20150131 1486692 Norovirus Hu/GII/BG1C0282/2011/BGD KJ685413.1 2 20150131 1486694 Norovirus Hu/GII/BG1C0317/2011/BGD KJ685412.1 2 20150131 1486697 Norovirus Hu/GII/BG1C0405/2012/BGD JX439815.1 1 20130731 1336082 Norovirus Hu/GII/Seoul1055/KOR/2010 JX439816.1 1 20130731 1336084 Norovirus Hu/GII/Seoul1072/KOR/2010 JX439817.1 1 20130731 1336095 Norovirus Hu/GII/Seoul1282/KOR/2010 JX439818.1 1 20130731 1336100 Norovirus Hu/GII/Seoul1367/KOR/2010 JX439819.1 1 20130731 1336131 Norovirus Hu/GII/Seoul1488/KOR/2011 GU991353.1 3 20120228 756495 Norovirus Hu/GII/Shanghai/SH2/2008/CHN KC894731.1 1 20130606 1338688 Norovirus Hu/GIV.1/CCDC GR1113-59/CHN/2011 JQ613567.1 3 20140507 1183318 Norovirus Hu/GIV.1/LakeMacquarie/NSW268O/2010/AU DQ369797.1 1 20060208 370037 Norovirus Hu/Guangzhou/NVgz01/CHN DQ456824.1 2 20120912 379081 Norovirus Hu/MK04/2004/JP AY741811.1 2 20060701 296145 Norovirus Hu/NLV/Dresden174/pUS-NorII/1997/GE AY772730.1 1 20041101 150137 Norovirus Hu/NLV/GII/Neustrelitz260/2000/DE from Germany KC175342.1 3 20130314 1261195 Norovirus Hu/Norwalk/10034/2009/VNM KC175343.1 3 20130314 1261196 Norovirus Hu/Norwalk/10051/2009/VNM KC175344.1 3 20130314 1261197 Norovirus Hu/Norwalk/10054/2009/VNM KC175345.1 3 20130314 1261198 Norovirus Hu/Norwalk/10062/2009/VNM KC175346.1 3 20130314 1261199 Norovirus Hu/Norwalk/10074/2009/VNM KC175347.1 3 20130314 1261200 Norovirus Hu/Norwalk/10075/2009/VNM KC175348.1 3 20130314 1261201 Norovirus Hu/Norwalk/10078/2009/VNM KC175349.1 3 20130314 1261202 Norovirus Hu/Norwalk/10079/2009/VNM KC175350.1 3 20130314 1261203 Norovirus Hu/Norwalk/10110/2009/VNM KC175351.1 3 20130314 1261204 Norovirus Hu/Norwalk/10114/2009/VNM KC175352.1 3 20130314 1261205 Norovirus Hu/Norwalk/10116/2009/VNM KC175353.1 3 20130314 1261206 Norovirus Hu/Norwalk/10129/2009/VNM KC175354.1 3 20130314 1261207 Norovirus Hu/Norwalk/10136/2009/VNM KC175355.1 3 20130314 1261208 Norovirus Hu/Norwalk/10137/2009/VNM KC175356.1 3 20130314 1261209 Norovirus Hu/Norwalk/10145/2009/VNM KC175357.1 3 20130314 1261210 Norovirus Hu/Norwalk/10148/2009/VNM KC175358.1 3 20130314 1261211 Norovirus Hu/Norwalk/10158/2009/VNM KC175359.1 3 20130314 1261212 Norovirus Hu/Norwalk/10160/2009/VNM KC175360.1 3 20130314 1261213 Norovirus Hu/Norwalk/10162/2009/VNM KC175361.1 3 20130314 1261214 Norovirus Hu/Norwalk/10163/2009/VNM KC175362.1 3 20130314 1261215 Norovirus Hu/Norwalk/10169/2009/VNM KC175363.1 3 20130314 1261216 Norovirus Hu/Norwalk/10173/2009/VNM KC175364.1 3 20130314 1261217 Norovirus Hu/Norwalk/10176/2009/VNM KC175365.1 3 20130314 1261218 Norovirus Hu/Norwalk/10177/2009/VNM KC175366.1 3 20130314 1261219 Norovirus Hu/Norwalk/10179/2009/VNM KC175367.1 3 20130314 1261220 Norovirus Hu/Norwalk/10182/2009/VNM KC175368.1 3 20130314 1261221 Norovirus Hu/Norwalk/10183/2009/VNM KC175369.1 3 20130314 1261222 Norovirus Hu/Norwalk/10194/2009/VNM KC175370.1 3 20130314 1261223 Norovirus Hu/Norwalk/10199/2009/VNM KC175371.1 3 20130314 1261224 Norovirus Hu/Norwalk/10203/2009/VNM KC175372.1 3 20130314 1261225 Norovirus Hu/Norwalk/10204/2009/VNM KC175373.1 3 20130314 1261226 Norovirus Hu/Norwalk/10222/2009/VNM KC175374.1 3 20130314 1261227 Norovirus Hu/Norwalk/10223/2009/VNM KC175375.1 3 20130314 1261228 Norovirus Hu/Norwalk/10235/2009/VNM KC175376.1 3 20130314 1261229 Norovirus Hu/Norwalk/10236/2009/VNM KC175377.1 3 20130314 1261230 Norovirus Hu/Norwalk/10238/2009/VNM KC175378.1 3 20130314 1261231 Norovirus Hu/Norwalk/10247/2009/VNM KC175379.1 3 20130314 1261232 Norovirus Hu/Norwalk/10255/2009/VNM KC175380.1 3 20130314 1261233 Norovirus Hu/Norwalk/10285/2010/VNM KC175381.1 3 20130314 1261234 Norovirus Hu/Norwalk/10296/2010/VNM KC175382.1 3 20130314 1261235 Norovirus Hu/Norwalk/10313/2010/VNM KC175383.1 3 20130314 1261236 Norovirus Hu/Norwalk/10325/2010/VNM KC175384.1 3 20130314 1261237 Norovirus Hu/Norwalk/10328/2010/VNM KC175385.1 3 20130314 1261238 Norovirus Hu/Norwalk/10368/2010/VNM KC175386.1 3 20130314 1261239 Norovirus Hu/Norwalk/10378/2010/VNM KC175387.1 3 20130314 1261240 Norovirus Hu/Norwalk/10386/2010/VNM KC175388.1 3 20130314 1261241 Norovirus Hu/Norwalk/20008/2009/VNM KC175389.1 3 20130314 1261242 Norovirus Hu/Norwalk/20010/2009/VNM KC175390.1 3 20130314 1261243 Norovirus Hu/Norwalk/20014/2009/VNM KC175391.1 3 20130314 1261244 Norovirus Hu/Norwalk/20016/2009/VNM KC175392.1 3 20130314 1261245 Norovirus Hu/Norwalk/20019/2009/VNM KC175393.1 3 20130314 1261246 Norovirus Hu/Norwalk/20033/2009/VNM KC175394.1 3 20130314 1261247 Norovirus Hu/Norwalk/20035/2009/VNM KC175395.1 3 20130314 1261248 Norovirus Hu/Norwalk/20044/2009/VNM KC175396.1 3 20130314 1261249 Norovirus Hu/Norwalk/20047/2009/VNM KC175397.1 3 20130314 1261250 Norovirus Hu/Norwalk/20066/2009/VNM KC175398.1 3 20130314 1261251 Norovirus Hu/Norwalk/20067/2009/VNM KC175399.1 3 20130314 1261252 Norovirus Hu/Norwalk/20069/2009/VNM KC175400.1 3 20130314 1261253 Norovirus Hu/Norwalk/20092/2009/VNM KC175401.1 3 20130314 1261254 Norovirus Hu/Norwalk/20093/2009/VNM KC175402.1 3 20130314 1261255 Norovirus Hu/Norwalk/20094/2009/VNM KC175403.1 3 20130314 1261256 Norovirus Hu/Norwalk/20118/2009/VNM KC175404.1 3 20130314 1261257 Norovirus Hu/Norwalk/20122/2009/VNM KC175405.1 3 20130314 1261258 Norovirus Hu/Norwalk/20123/2009/VNM KC175406.1 3 20130314 1261259 Norovirus Hu/Norwalk/20128/2009/VNM KC175407.1 3 20130314 1261260 Norovirus Hu/Norwalk/20135/2009/VNM KC175408.1 3 20130314 1261261 Norovirus Hu/Norwalk/20139/2009/VNM KC175409.1 3 20130314 1261262 Norovirus Hu/Norwalk/20140/2009/VNM KC175410.1 3 20130314 1261263 Norovirus Hu/Norwalk/20142/2009/VNM GU991354.1 3 20120228 756496 Norovirus Hu/Shanghai/SH5/2009/CHN GU991355.1 3 20120228 756497 Norovirus Hu/Shanghai/SH312/2009/CHN AB365435.1 1 20080425 479952 Norovirus Hu/Texas/TCH04-577/2004/US EU854589.1 2 20080803 549341 Norovirus mouse/Hannover1/2007/DEU HQ392821.1 2 20120603 1088689 Norovirus pig/GII/Ch6/China/2009 AF093797.1 5 20050415 11983 Norwalk virus AB084071.1 3 20090113 95340 Norwalk-like virus strain:GIFU'99 AY134748.1 3 20050416 52276 Snow Mountain virus JQ957874.1 2 20130512 1286142 Nse virus strain F24/CI/2004 JX236040.3 4 20130915 64292 Ntaya virus isolate IPDIA AF102884.1 3 20010531 85652 Nudaurelia capensis beta virus X56147.1 3 20050418 10589 Human papillomavirus type 41 FJ554526.1 1 20090518 644610 Nyamanini nyavirus isolate tick 39 AF079457.1 4 20050415 79899 Igbo Ora virus AF079456.1 4 20050415 11027 O'nyong-nyong virus JF705877.1 1 20110817 318852 Oak-Vale virus strain K13965 U87832.1 4 20050418 56879 Oat blue dwarf virus X83964.1 4 20050418 146762 Oat chlorotic stunt virus AJ132578.1 4 20150307 45103 Oat golden stripe virus RNA1 AJ132579.1 4 20150307 45103 Oat golden stripe virus RNA2 HM856902.1 1 20120316 380160 Obodhiang virus isolate Obodhiang from Sudan JN592050.1 1 20120102 9872 Odocoileus hemionus endogenous virus Cervid endogenous retrovirus CrERVg KM598386.1 1 20150113 1592107 Odonata associated gemycircularvirus-1 isolate OdaGmV-1-US-260SR1-12 KM598387.1 1 20150113 1592108 Odonata associated gemycircularvirus-2 isolate OdaGmV-2-US-1642KW-12 KM598393.1 1 20150113 1592109 Odonata-associated circular virus-1 isolate OdasCV-1-US-504LB-12 KM598399.1 1 20150113 1592120 Odonata-associated circular virus-2 isolate OdasCV-2-US-364BC-12 KM598407.1 1 20150113 1592123 Odonata-associated circular virus-3 isolate OdasCV-3-US-221LB1-12 KM598408.1 1 20150113 1592124 Odonata-associated circular virus-4 isolate OdasCV-4-US-517BC-12 KM598410.1 1 20150113 1592125 Odonata-associated circular virus-5 isolate OdasCV-5-US-1683LM1-12 KM598389.1 1 20150113 1592126 Odonata-associated circular virus-6 isolate OdasCV-6-US-1642LM1-12 KM598390.1 1 20150113 1592127 Odonata-associated circular virus-7 isolate OdasCV-7-US-1706LM1-12 KM598391.1 1 20150113 1592128 Odonata-associated circular virus-8 isolate OdasCV-8-US-1739LM1-12 KM598392.1 1 20150113 1592129 Odonata-associated circular virus-9 isolate OdasCV-9-US-466DFS-12 KM598412.1 1 20150113 1592110 Odonata-associated circular virus-10 isolate OdasCV-10-US-1675LM1-12 KM598394.1 1 20150113 1592111 Odonata-associated circular virus-11 isolate OdasCV-11-US-341DFS-12 KM598395.1 1 20150113 1592112 Odonata-associated circular virus-12 isolate OdasCV-12-US-1518LM1-12 KM598396.1 1 20150113 1592113 Odonata-associated circular virus-13 isolate OdasCV-13-US-1591LM1-12 KM598397.1 1 20150113 1592114 Odonata-associated circular virus-14 isolate OdasCV-14-US-1577SC3-12 KM598398.1 1 20150113 1592115 Odonata-associated circular virus-15 isolate OdasCV-15-US-1640LM1-12 KM598411.1 1 20150113 1592116 Odonata-associated circular virus-16 isolate OdasCV-16-US-1614LM1-12 KM598400.1 1 20150113 1592117 Odonata-associated circular virus-17 isolate OdasCV-17-US-1619LM1-12 KM598403.1 1 20150113 1592118 Odonata-associated circular virus-18 isolate OdasCV-18-US-1736LM2-12 KM598404.1 1 20150113 1592119 Odonata-associated circular virus-19 isolate OdasCV-19-US-1594LM1-12 KM598406.1 1 20150113 1592121 Odonata-associated circular virus-20 isolate OdasCV-20-US-718DFS-12 KM598409.1 1 20150113 1592122 Odonata-associated circular virus-21 isolate OdasCV-21-US-1679SC3-12 U34586.1 4 20120404 12238 Odontoglossum ringspot virus HF546575.1 1 20121218 1249467 Okra enation leaf curl alphasatellite FR717137.1 1 20101201 912034 Okra leaf curl Cameroon virus, isolate pGRec17F EF554577.1 2 20080227 70822 Okra mosaic virus isolate PV-0264 EU024119.1 2 20090319 454125 Okra leaf curl virus-[Mali] HE793424.1 2 20130507 401040 Okra yellow crinkle virus complete sequence, isolate Njo5:TOC15 EU024118.1 1 20070723 454126 Okra yellow crinkle virus-[Mali] X85989.1 6 19960828 47669 Olive latent virus 1 AY616760.1 3 20060509 295090 Olive mild mosaic virus AY216514.2 2 20080110 42764 Oliveros virus segment L U34248.1 2 20000304 42764 Oliveros virus segment S EF536349.1 1 20080427 461322 Ursus maritimus papillomavirus 1 AJ238373.1 3 20070612 82676 Omikronpapillomavirus 1 JN709470.1 2 20120325 1144381 Tursiops truncatus papillomavirus 5 strain Tt08-09-5 JN709471.1 2 20120325 1144382 Tursiops truncatus papillomavirus 6 strain Tt08-305 AY438626.1 3 20061104 12542 Omsk hemorrhagic fever virus strain Kubrin HQ258894.1 1 20110601 43130 Onion yellow dwarf virus isolate MS/SW1 JX433020.1 2 20130604 43130 Onion yellow dwarf virus isolate OYDV-At JX429964.1 1 20130801 43130 Onion yellow dwarf virus isolate SG1 AB219833.1 2 20081213 43130 Onion yellow dwarf virus isolate: G79 J04375.1 5 20050417 12153 Ononis yellow mosaic virus GQ222416.1 1 20091019 9733 Orcinus orca endogenous retrovirus AY386263.1 4 20050416 10258 Orf virus strain OV-IA8 EU309041.1 3 20080422 490711 Orgyia leucostigma NPV isolate CFS-77 U75930.2 7 20101003 262177 Orgyia pseudotsugata multiple nucleopolyhedrovirus JQ807996.1 1 20121104 12204 Ornithogalum mosaic virus isolate SW3.3 AF484424.1 3 20030529 118655 Oropouche virus segment L AF441119.1 2 20040316 118655 Oropouche virus segment M AY237111.1 1 20040101 118655 Oropouche virus segment S HQ827781.1 1 20110323 185639 Acheta domestica densovirus EU747721.1 1 20081216 92521 Oryctes rhinoceros nudivirus isolate Ma07 AY509253.2 6 20130901 261939 Ostreid herpesvirus 1 HM004431.1 1 20101130 880162 Ostreococcus lucimarinus virus OlV1 FN386611.1 5 20150307 642926 Ostreococcus tauri virus 1 FN600414.1 4 20110419 696472 Ostreococcus tauri virus 2 JN225873.1 1 20120305 1120767 Ostreococcus tauri virus RT-2011 JX520658.1 3 20130326 1276185 Otomops polyomavirus 2 isolate KY156 U40839.3 11 20071221 114430 Ovine adenovirus 7 isolate 287 FJ744149.1 3 20100811 69576 Ovine enzootic nasal tumor virus AY839756.1 4 20100325 10398 Ovine herpesvirus 2 strain BJ1035 M31646.1 5 20061114 11663 Ovine lentivirus AF252854.1 2 20060116 114429 Bovine adenovirus 2 DQ838493.1 2 20100621 9940 Ovis aries endogenous virus Jaagsiekte sheep retrovirus KJ013302.1 1 20140611 1505530 Pagoda yellow mosaic associated virus strain pymav-01 JX159983.1 5 20140620 1236399 Pan troglodytes schweinfurthii polyomavirus 2 HQ385746.1 2 20101230 928211 Pan troglodytes verus polyomavirus 1a, isolate 6444 HQ385747.1 2 20101230 927576 Pan troglodytes verus polyomavirus 1b, isolate 6520 HQ385748.1 2 20101230 928212 Pan troglodytes verus polyomavirus 2a, isolate 6512 HQ385750.1 2 20101230 928213 Pan troglodytes verus polyomavirus 2c isolate 5927 JX159980.1 5 20140620 1236401 Pan troglodytes verus polyomavirus 3 JX159981.1 5 20140620 1236402 Pan troglodytes verus polyomavirus 4 JX159982.1 5 20140620 1236403 Pan troglodytes verus polyomavirus 5 GQ916624.1 1 20100616 796352 Panax virus Y KC977570.1 3 20131114 1349409 Pandoravirus dulcis KP136319.1 1 20150206 1605721 Pandoravirus inopinatum isolate KlaHel U55002.1 6 19981223 40279 Panicum mosaic virus EU224265.1 2 20080301 10826 Panicum streak virus L39638.1 6 20050417 268779 Panicum streak virus - Karino AF480884.1 9 20130510 188763 Panine herpesvirus 2 HE580236.1 3 20130128 928315 Papaya leaf crumple virus, clone KN6 HM140369.1 3 20120704 913602 Papaya leaf crumple virus-Najafgarh 1 [India:New Delhi:Papaya:2008] HM140368.1 3 20120704 913601 Papaya leaf crumple virus-Nirulas [India:New Delhi:Papaya:2007] HM140367.1 3 20120704 913600 Papaya leaf crumple virus-Panipat 8 [India:Panipat:Papaya:2008] JF682837.1 1 20111002 229634 Papaya leaf curl China virus isolate Fz10 FN297834.1 1 20090407 631718 Papaya leaf curl China virus GX4 FN256260.1 1 20090313 623710 Papaya leaf curl China virus HeNZM1 AY650283.1 1 20040707 283663 Papaya leaf curl China virus-Guangzhou isolate FJ869907.1 1 20090429 271479 Papaya leaf curl Guandong virus isolate F11 AJ436992.1 2 20040625 53260 Papaya leaf curl virus JX974555.1 2 20150422 46917 Papaya leaf distortion mosaic virus isolate HaiNan-DF JX416282.1 1 20121003 46917 Papaya leaf distortion mosaic virus isolate Taiwan-CZ JX123318.1 2 20121017 685899 Papaya lethal yellowing virus isolate 26 D13957.1 6 20061114 12181 Papaya mosaic virus X97251.1 6 20081007 12205 Papaya ringspot virus EF017707.1 2 20070324 12206 Papaya ringspot virus P isolate DEL AY010722.1 4 20050416 12207 Papaya ringspot virus W DQ149153.1 3 20060122 340907 Papiine herpesvirus 2 JF304764.1 1 20120415 990303 Papio hamadryas papillomavirus type 1 isolate Mac2085 AB089381.1 6 20080621 35281 Paprika mild mottle virus KC237063.1 1 20130304 11207 Parainfluenza virus 5 strain 08-1990 JF411744.1 2 20110904 10506 Paramecium bursaria Chlorella virus 1 (PBCV-1) DQ890022.1 4 20071016 399781 Paramecium bursaria Chlorella virus FR483 EU627613.1 2 20080815 45222 Parana virus segment L AF485261.1 3 20030620 45222 Parana virus segment S KM502564.1 1 20141221 1579460 Parapoxvirus red deer/HL953 strain HL953 JN565944.1 3 20120316 1128118 Parrot hepatitis B virus isolate PL D14066.1 6 20071101 12777 Parsnip yellow fleck virus KF170373.1 3 20131105 1352534 Parvo-like hybrid virus UC1 KF214645.1 2 20131105 1395615 Parvo-like hybrid virus UC4 KF214640.1 2 20131105 1395620 Parvo-like hybrid virus UC9 KF214638.1 2 20131105 1395611 Parvo-like hybrid virus UC11 KM105951.1 1 20150218 1608453 Parvovirus NIH-CQV-Co JX491648.1 2 20130815 1511785 Parechovirus-like virus PLV-CHN JQ316470.1 2 20120828 1511784 Pasivirus A1 JQ948061.1 2 20121014 1196236 Paspalum dilatatum striate mosaic virus isolate AU-1660-2004 JF905486.1 3 20120224 1072672 Paspalum striate mosaic virus DQ455582.1 2 20061223 379892 Passiflora latent carlavirus HQ389540.1 4 20120404 1032457 Passion fruit mosaic virus-FL AB761400.1 1 20130403 31732 Passion fruit woodiness virus genomic RNA isolate: Gld-1 HQ122652.2 5 20130201 31732 Passion fruit woodiness virus, isolate PWV-MU2 AJ006500.1 2 19990514 12294 Pea early-browning virus X89997.1 5 20050418 12208 Pea seed-borne mosaic virus KC986815.1 4 20140515 1436892 Pea yellow stunt virus isolate Glinzendorf-Marchfeld_15 EF693898.1 2 20071212 471498 Peach chlorotic mottle virus U13988.1 3 20050417 35593 Peanut chlorotic streak virus AF023848.1 2 20050415 33763 Peanut mottle virus U15728.1 8 20040622 12313 Peanut stunt virus RNA 1 strain ER D11126.1 8 20071207 12313 Peanut stunt virus RNA 1 strain J U15729.1 6 20040622 12313 Peanut stunt virus RNA 2 strain ER D11127.1 6 20071207 12313 Peanut stunt virus RNA 2 strain J U15730.1 4 20040622 12313 Peanut stunt virus RNA 3 strain ER HF568781.1 1 20141214 619631 Pedilanthus leaf curl virus isolate Pakistan:Multan:2007, clone SPA1 AM712436.1 3 20090227 587313 Pedilanthus leaf curl virus [Pakistan:Multan:2004] AF023424.1 3 20050415 1307800 Pegivirus A AY613852.2 7 20150113 167019 Pelargonium line pattern virus isolate PV-0193 AJ607402.1 4 20090728 255587 Pelargonium necrotic spot virus GQ428155.1 1 20090922 671126 Pelargonium vein banding virus AJ272327.1 2 20031030 116056 Pelargonium zonate spot virus AY570982.3 3 20140829 282786 Penaeid shrimp infectious myonecrosis virus KJ184318.1 2 20140810 1529056 Penaeus monodon nudivirus KJ859677.1 1 20140625 648998 Penguinpox virus isolate PSan92 AY642590.1 1 20050601 221262 Pennisetum mosaic virus isolate B AY509927.1 3 20050522 112229 Pepino mosaic virus strain US2 JQ743486.1 1 20120626 223301 Pepper golden mosaic virus strain Llano Grande X70418.1 8 20150307 223303 Pepper huasteco yellow vein virus component A X70419.1 7 20150307 223303 Pepper huasteco yellow vein virus component B JQ303122.1 3 20120903 1166473 Pepper huasteco yellow vein virus- San Luis Potosi AM691745.1 2 20110725 884610 Pepper leaf curl Lahore virus, clone P1 AF134484.2 3 20050415 83839 Pepper leaf curl virus EF190217.1 2 20080301 436241 Pepper leaf curl virus isolate Varanasi EF190215.1 2 20080301 436242 Pepper leaf curl virus satellite DNA beta EU585781.1 1 20080420 519015 Pepper leaf curl Yunnan virus-[YN323] EU585782.1 1 20080420 519016 Pepper leaf curl Yunnan virus satellite DNA beta AY859497.1 3 20061115 12239 Pepper mild mottle virus isolate PMMoV-CN M96425.1 6 20050417 12209 Pepper mottle virus AM181350.1 1 20060922 12210 Pepper severe mosaic virus AB594828.1 3 20130702 909827 Pepper vein yellows virus DQ645484.1 1 20090115 255066 Pepper veinal mottle virus KC149941.1 1 20130207 1288829 Pepper yellow leaf curl China virus isolate YN57-18 DQ083765.1 1 20070701 292477 Pepper yellow leaf curl Indonesia virus isolate Bogor tomato AB541985.1 3 20130811 160358 Pepper yellow mosaic virus RNA AY502935.1 2 20080326 260378 Pepper yellow vein Mali virus AF323747.1 2 20020502 170621 Perina nuda virus HM566195.1 1 20120503 318850 Perinet virus JF755418.1 2 20110928 1074206 Peromyscus papillomavirus type 1 strain M-14 PmPV1 JN880414.1 1 20120111 1131702 Persea americana endornavirus isolate Fuerte HE805114.1 1 20120530 1183241 Persimmon cryptic virus segment 2, isolate SSPI AB923925.1 1 20141225 1493829 Persimmon virus B genomic RNA variant 2 AJ849636.2 3 20050716 31604 Peste-des-petits-ruminants virus KJ660072.1 2 20140522 219447 Pestivirus PG-2 U95208.2 4 20010629 59504 Petunia vein clearing virus AB353071.1 4 20090127 457382 Phaius virus X DQ091200.1 1 20060513 338903 Capra hircus papillomavirus 1 EU162589.1 1 20071011 475777 Phlox Virus B KJ469372.1 1 20150305 64894 Phnom Penh bat virus strain 30834_A38 KC802221.1 2 20130707 11240 Phocine distemper virus strain PDV/Wadden_Sea.NLD/1988 GU117621.1 1 20110403 706525 Phocoena phocoena papillomavirus 1 GU117622.1 1 20110403 706526 Phocoena phocoena papillomavirus 2 KF537784.1 1 20140731 1523858 Phomopsis longicolla hypovirus isolate ME711 KP090346.1 1 20141228 1580605 Phomopsis vexans RNA virus isolate 1 AF499596.1 2 20050415 192584 Phthorimaea operculella granulovirus Y16104.1 1 19980801 72539 Physalis mottle virus JN603241.1 2 20121230 1133557 Phytophthora infestans RNA virus 3 JN400241.1 3 20120224 1077832 Phytophthora infestans RNA virus 4 isolate FLa2005 JQ898334.1 2 20121024 1224515 Picalivirus A isolate PicaV-A AF427517.1 3 20030529 11630 Pichinde virus large segment K02734.1 2 20060803 11630 Pichinde virus segment S HQ322117.1 1 20110622 1046893 Picobiliphyte sp. MS584-5 nanovirus GQ884143.1 3 20120816 252584 Pieris rapae granulovirus JX305995.1 1 20121111 1249501 Pig stool associated circular ssDNA virus isolate HUN1 JQ023166.1 1 20120513 1114942 Pig stool associated circular ssDNA virus GER2011 KC811837.1 1 20130910 1379161 Pigeon mesivirus 2 strain pigeon/GALII5-PiMeV/2011/HUN FR727144.1 2 20111102 928289 Pigeon picornavirus B, strain 03/641 KJ801920.1 1 20140625 10264 Pigeonpox virus isolate FeP2 FJ872827.1 2 20090922 219584 Pike fry rhabdovirus JX159984.1 5 20140620 1236407 Piliocolobus rufomitratus polyomavirus 1 GU121676.1 1 20101102 512088 Pineapple bacilliform comosus virus KJ872494.1 1 20140904 180903 Pineapple mealybug wilt-associated virus 1 isolate Hainan DQ664501.1 1 20061002 392505 Mastomys coucha papillomavirus 2 GQ180114.1 2 20091023 664730 Rattus norvegicus papillomavirus 1 EES-2009 DQ269468.1 2 20070420 10568 Micromys minutus papillomavirus 1 GU808564.1 2 20110309 763552 Mus musculus papillomavirus type 1 KC808712.1 3 20140515 262957 Piper yellow mottle virus strain ISH-1 EF065509.1 1 20070210 424363 Bat coronavirus HKU5-1 EF065510.1 1 20070210 424364 Bat coronavirus HKU5-2 EF065511.1 1 20070210 424365 Bat coronavirus HKU5-3 EF065512.1 1 20070210 424366 Bat coronavirus HKU5-5 AY494081.1 1 20040428 49891 Pirital virus segment L AF485262.1 3 20030620 49891 Pirital virus segment S HQ339954.1 2 20110522 912320 Piscine myocarditis virus AL V-708 JF930327.1 1 20140702 1176736 Pitaya virus X isolate P37 KF740664.1 3 20140501 1450746 Pithovirus sibericum isolate P1084-T AF364090.1 3 20030529 159252 Planaria asexual strain-specific virus-like element type 1 segment L AF364089.1 4 20050415 159252 Planaria asexual strain-specific virus-like element type 1 segment S AY800279.1 2 20051223 315713 Nandina mosaic virus isolate PLH 1 AB360791.1 1 20080301 28354 Plantago asiatica mosaic virus EF546442.1 2 20071212 675077 Plum bark necrosis stem pitting-associated virus X16415.1 9 20050418 12211 Plum pox virus AY028309.2 4 20040818 12211 Plum pox virus isolate BOR-3 AM157175.1 2 20060525 31738 Plum pox virus strain El Amar HF585099.1 3 20150307 587197 Plum pox virus strain Marcus isolate SK-111pl HF585103.1 2 20150307 587197 Plum pox virus strain Marcus isolate VAR-2/M13 KJ395757.1 1 20150409 1501716 Plumeria mosaic virus isolate Plu-Ind-1 AF270937.1 2 20050415 98383 Plutella xylostella granulovirus DQ457003.1 3 20071101 379891 Plutella xylostella multiple nucleopolyhedrovirus isolate CL3 JF713716.1 1 20111102 1105383 Po-Circo-like virus 21 JF713717.1 1 20111102 1105384 Po-Circo-like virus 22 JF713718.1 1 20111102 1105385 Po-Circo-like virus 41 JF713719.1 1 20111102 1105386 Po-Circo-like virus 51 AJ271595.1 3 20050415 113553 Poinsettia mosaic virus JQ609096.1 2 20121017 1220025 Pokeweed mosaic virus isolate PkMV-MD AY505475.1 2 20040923 12166 Poplar mosaic virus isolate PV-0341 JX274036.1 3 20130129 1231387 Porcine associated stool circular virus isolate Cass JF713710.1 1 20111102 1105378 Porcine astrovirus 2 strain 43/USA JX556691.1 3 20130305 1254425 Porcine astrovirus 3 isolate US-MO123 JF713713.1 1 20111102 1105379 Porcine astrovirus 4 strain 35/USA JF713711.1 1 20111102 1093928 Porcine astrovirus 5 strain 33/USA KF206167.1 1 20130804 1165907 Porcine bocavirus strain G85-1AT-HU JN831651.1 1 20120111 1131622 Porcine bocavirus 5/JS677 JX524206.1 2 20121107 46221 Porcine circovirus isolate BIV FJ655419.1 4 20110204 720569 Porcine circovirus type 1/2a, isolate FMV08-1133505 AY660574.1 1 20040719 133704 Porcine circovirus-1 AF109397.1 5 20061114 85542 Bovine circovirus EU057185.1 1 20080802 479166 Porcine circovirus 2 P0404c/03 EU057189.1 1 20080802 479167 Porcine circovirus 2 R0255/209/03 EU057188.1 1 20080802 479168 Porcine circovirus 2 S0255/210/03 DQ218419.1 1 20051011 348291 Porcine circovirus 2 strain SD3 DQ218420.1 1 20051011 348292 Porcine circovirus 2 strain SD5 DQ218421.1 1 20051011 348293 Porcine circovirus 2 strain SD6 EU057186.1 1 20080802 479169 Porcine circovirus 2 T0181c/03 EU057187.1 1 20080802 479170 Porcine circovirus 2 U0168/03 EU057184.1 1 20080802 479171 Porcine circovirus 2 Z0161b/03 AF112862.1 5 20061114 85709 Porcine circovirus type 2-B AF109398.1 5 20061114 85543 Porcine circovirus type 2-C AF117753.1 5 20061114 86385 Porcine circovirus type 2-D AF109399.1 5 20061114 85544 Porcine circovirus type 2-E GQ404852.1 1 20100315 85708 Porcine circovirus-2 isolate MN614 KJ612072.1 1 20140616 1506546 Porcine circovirus-like virus P1 isolate JSNJ KJ481931.1 4 20140607 1465644 Deltacoronavirus PDCoV/USA/Illinois121/2014 KJ601777.1 1 20140805 1477411 Deltacoronavirus PDCoV/USA/Illinois133/2014 from USA KJ601778.1 1 20140805 1477412 Deltacoronavirus PDCoV/USA/Illinois134/2014 from USA KJ601779.1 1 20140805 1477413 Deltacoronavirus PDCoV/USA/Illinois136/2014 from USA KJ601780.1 1 20140805 1477414 Deltacoronavirus PDCoV/USA/Ohio137/2014 from USA JQ065042.1 1 20120320 1159905 Porcine coronavirus HKU15 strain HKU15-44 KP981395.1 1 20150409 1586324 Porcine deltacoronavirus strain USA/IL/2014/026PDV_P11 KJ567050.1 7 20140515 1476502 Porcine deltacoronavirus 8734/USA-IA/2014 KM820765.1 1 20141014 1559519 Porcine deltacoronavirus KNU14-04 KJ769231.1 1 20140805 1525854 Swine deltacoronavirus OhioCVM1/2014 EF185992.1 2 20070118 28295 Porcine epidemic diarrhea virus strain LZC from China LM645057.1 1 20141216 1525377 Porcine epidemic diarrhea virus L00721/GER/2014 AJ237815.1 3 20050415 35265 Porcine adenovirus 3 AF289262.1 2 20050415 45370 Porcine adenovirus 5 JX857411.1 2 20130930 1357321 Porcine parainfluenza virus 1 strain S119N KC992732.1 1 20130818 1208310 Porcine partetravirus strain FMV10-1437266 JX896318.1 3 20130628 1241957 Porcine parvovirus 5 isolate MI216 KF999685.1 1 20140323 1472911 Porcine parvovirus 6 isolate TJ M96262.2 10 20050417 11049 Lelystad virus AF046869.1 4 20050415 28344 Porcine reproductive and respiratory syndrome virus AY588319.1 2 20100723 288959 PRRSV LV4.2.1 BK005918.1 2 20140501 53179 Porcine rubulavirus KJ577810.1 1 20140902 1537164 Porcine stool-associated circular virus 1 isolate DP2 KC545226.1 2 20131022 1328031 Porcine stool-associated circular virus 2 isolate f KC545229.1 2 20131022 1328032 Porcine stool-associated circular virus 3 isolate 4L5 KJ417134.1 5 20140515 1475062 Porcine stool-associated circular virus 4 isolate CP2 KJ433989.1 4 20140522 1475063 Porcine stool-associated circular virus 5 isolate CP3 KJ577819.1 1 20140902 1537165 Porcine stool-associated circular virus 6 isolate XP1 KJ577815.1 1 20140902 1537166 Porcine stool-associated circular virus 7 isolate EP3-D KJ577817.1 1 20140902 1537167 Porcine stool-associated circular virus 8 isolate GP2 KJ577816.1 1 20140902 1537168 Porcine stool-associated circular virus 9 isolate FP1 JQ429405.1 3 20120809 118140 Porcine teschovirus strain wild boar/WB2C-TV/2011/HUN JQ975417.1 1 20130107 138681 Porcine teschovirus 4 isolate 10BJ02 JN710381.1 1 20111024 363168 Porcine teschovirus 8 strain Jilin/2003/2 JQ860350.1 4 20140515 237020 Porcine torovirus strain SH1 EU523109.1 2 20091123 61673 Porcine endogenous retrovirus HQ540591.1 1 20110522 194958 Porcine endogenous retrovirus A clone 907F8 HQ540595.1 1 20110522 194959 Porcine endogenous retrovirus B clone 1155D9 EF133960.1 3 20100630 509154 Porcine endogenous retrovirus C AF356697.1 1 20010814 168238 Porcine endogenous retrovirus E JF713720.1 1 20111102 1105380 Posavirus 1 JF713721.1 1 20111102 1105381 Posavirus 2 EF043234.1 1 20061118 410826 Potato apical leaf curl disease-associated satellite DNA beta S73580.1 3 20040901 12182 Potato aucuba mosaic virus D13954.1 4 20030707 12045 Potato leafroll virus AJ238607.1 1 19991015 37128 Potato mop-top virus RNA 1 D16193.1 7 20061211 37128 Potato mop-top virus RNA 3 AJ131401.1 2 20050415 12215 Potato virus A HM584819.1 2 20130702 1046402 Potato virus H isolate Huhhot D14449.2 8 20070927 12167 Potato virus M EU020009.1 2 20080904 106118 Potato rough dwarf virus isolate Arg EU338239.1 2 20080904 329164 Potato Virus P AJ863510.1 2 20070316 12169 Potato virus S AB697482.1 1 20120530 36403 Potato virus T genomic RNA, isolate: Japanese M72416.1 2 20000304 12183 Potato virus X D00441.1 8 20070926 12216 Potato virus Y EF558545.1 1 20070529 444180 Potato virus Y strain (N)W isolate Wilga EU563512.1 3 20110301 12217 Potato virus Y strain C JQ924286.1 1 20121001 1234808 Potato virus Y strain N-Wi isolate MAF-VOY AJ889866.1 2 20070210 122280 Potato virus Y strain NTN JQ924285.1 1 20121001 12220 Potato virus Y strain O isolate YO-ANT25 AM113988.1 1 20070210 317718 Potato virus Y strain Wilga complete genome, genomic RNA, isolate 261-4 AJ889867.1 2 20070210 317719 Potato virus Y strain Wilga 156 AJ889868.1 2 20070210 317720 Potato virus Y strain Wilga 156var HE608963.1 1 20120401 1107954 Potato virus Y Wilga MV99 HE608964.1 1 20120401 1107955 Potato virus Y Wilga MV175 GU734660.1 1 20100421 195060 Potato yellow dwarf virus Y15034.1 7 20150307 223307 Potato yellow mosaic Panama virus segment A Y15033.1 6 20150307 223307 Potato yellow mosaic Panama virus segment B D00941.1 6 20020603 10827 Potato yellow mosaic virus DNA B D00940.1 5 20050417 223310 Potato yellow mosaic virus - [Venezuela] DNA-A AJ243370.1 4 20050415 44562 Pothos latent virus AF311056.1 4 20081216 58535 Deer tick virus EU543649.1 2 20090513 11083 Powassan virus HM145750.1 2 20100813 864686 Bocavirus gorilla/GBoV1/2009 KJ634207.1 1 20140618 689403 Human bocavirus 1 isolate 307AR09 EU918736.1 2 20090422 638313 Human bocavirus 3 FJ170278.1 2 20140623 1511882 Human bocavirus 2c PK isolate PK-5510 FJ973561.2 4 20140623 1511883 Human bocavirus 4 NI strain HBoV4-NI-385 AF162273.1 1 19990802 10798 Human parvovirus B19 D13784.1 9 20071005 11908 Human T-lymphotropic virus 1 U19949.1 6 20050417 11908 Human T-lymphotropic virus 1, isolate ATL-YS AF074966.1 3 20050415 33747 Simian T-lymphotropic virus 1 Y13051.1 3 20061114 36368 Human T-cell lymphotropic virus type 2b M10060.1 12 20061114 11909 Human T-lymphotropic virus 2 Y14365.1 2 19980429 11909 Human T-lymphotropic virus 2 isolate pygmy2 Y14570.1 4 20120314 33748 Simian T-lymphotropic virus 2 DQ093792.1 1 20060720 28332 Human T-lymphotropic virus 3 strain 2026ND AF391797.1 3 20050415 39101 Simian T-lymphotropic virus 3 KM390024.1 2 20150227 289365 Human parvovirus 4 isolate T609 AY622943.1 3 20140623 1511919 Human parvovirus 4 G1 GU991616.1 2 20101021 213633 Providence virus L28145.1 5 20080619 33760 Prune dwarf virus RNA 3 L38823.1 3 20000304 37733 Prunus necrotic ringspot virus RNA3 KF700263.1 1 20140805 1472425 Prunus virus T isolate Aze239 EU678671.1 1 20081101 36355 Pseudaletia unipuncta granulovirus GQ329669.1 4 20100521 129726 Pseudocowpox virus DQ366842.1 2 20060926 369584 Rousettus aegyptiacus papillomavirus 1 KJ675568.1 1 20141216 1580497 Psittacine adenovirus 3 isolate HKU/Parrot19 JX520662.1 2 20130326 1273092 Pteronotus polyomavirus isolate GTM203 KF534749.1 2 20140501 1479613 Puerto Almendras virus isolate LO-39 X61034.1 4 20030319 11604 Puumala virus segement M X61035.1 4 20030319 11604 Puumala virus segement S Z66548.1 6 20030319 11604 Puumala virus segment L KJ173785.1 2 20140529 1480065 Pygoscelis adeliae papillomavirus isolate Crozier_2013 JN674502.1 3 20130201 1089138 Quail picornavirus QPV1/HUN/2010 FJ644291.1 2 20090513 643132 Quang Binh virus JF729316.1 1 20120928 1161132 Rabbit astrovirus TN/2208/2010 JN874561.1 2 20120503 1160968 Rabbit coronavirus HKU14 strain HKU14-8 AF170722.1 8 20100907 10271 Rabbit fibroma virus DQ280493.1 1 20051130 11976 Rabbit hemorrhagic disease virus U54983.1 5 20050417 11977 Rabbit hemorrhagic disease virus-V351 (RHDV-V351) AJ866991.1 2 20050620 303317 Rabbit vesivirus M31046.1 5 20050417 11292 Rabies virus AB044824.1 4 20130528 11292 Rabies virus strain Nishigahara AB009663.2 7 20130528 11292 Rabies virus strain RC-HL KP233897.1 2 20150412 1603962 Rabovirus A isolate Berlin2010 JQ178241.1 1 20120816 1219896 Raccoon polyomavirus strain R45 EU194914.2 3 20110720 435646 Radish leaf curl virus isolate Pusa Bihar GU732203.1 3 20130426 1325578 Radish leaf curl virus-Hajipur [IN:Bih:ok09] FN396969.1 2 20150307 486809 Ramie mosaic virus FN396970.1 2 20150307 486809 Ramie mosaic virus complete DNA-B genome, isolate J4 KC810012.1 1 20130731 1370094 Rangifer tarandus papillomavirus 2 isolate RtPV2 DQ665917.1 4 20061115 85655 Ranid herpesvirus 1 strain McKinnell DQ665652.1 4 20061115 389214 Ranid herpesvirus 2 strain ATCC VR-568 FR823300.1 2 20120203 988645 Raspberry leaf blotch virus segment RNA2 DQ357218.1 3 20070613 326941 Raspberry leaf mottle virus KP967684.1 1 20150430 1640278 Rat cytomegalovirus ALL-03 isolate Malaysian JX645345.1 2 20140501 1299922 Rat minute virus isolate NTU2 JX827169.1 1 20121106 1248250 Rat parvovirus NTU1 JF729471.1 2 20120224 1123754 Rattail cactus necrosis-associated virus DQ146997.1 1 20060825 345250 Raven circovirus isolate 4-1131 EU030001.1 1 20070805 11834 RD114 retrovirus isolate SC3C FJ685618.1 2 20090513 590403 Red clover vein mosaic virus AB628188.1 1 20111030 425279 Rehmannia mosaic virus genomic RNA, isolate: Japanese KM114265.1 1 20140903 1539978 Reptile bornavirus 1 strain 251327 U39661.1 2 20050417 12814 Respiratory syncytial virus KJ627652.1 2 20140501 1439707 Respiratory syncytial virus type A isolate RSV-A/US/BID-V8320/2002 JX477166.1 3 20130310 186539 Reston ebolavirus isolate RESTV/M.fascicularis-tc/PHL-USA/1996/Ferlite, Philippines/Alice, TX AB050936.1 8 20060227 129003 Reston ebolavirus - Reston AY842951.1 3 20060502 11636 Reticuloendotheliosis virus strain HA9901 KM591901.1 2 20150422 1574627 Rhesus adenovirus 51 KM591902.1 2 20150422 1574628 Rhesus adenovirus 52 KM591903.1 2 20150422 1574629 Rhesus adenovirus 53 EF203066.1 1 20071011 693998 Rhinolophus bat coronavirus HKU2 JQ814849.1 3 20120927 1195373 Rhinolophus ferrumequinum circovirus 1 KC858266.1 1 20140311 1464074 Rhinolophus ferrumequinum papillomavirus type 1 D00239.1 5 20030707 12129 Human rhinovirus 1B FJ445111.1 2 20090411 573824 Human rhinovirus A1, strain ATCC VR-1559 FJ445176.1 2 20090411 44136 Human rhinovirus A7, strain ATCC VR-1117 FJ445113.1 2 20090411 185890 Human rhinovirus A8 strain ATCC VR-1118 FJ445114.1 2 20090411 185891 Human rhinovirus A9 isolate F01 FJ445178.1 2 20090411 185892 Human rhinovirus A10 strain ATCC VR-1120 EF173414.1 1 20070716 39767 Human rhinovirus A11 EF173415.1 1 20070716 147684 Human rhinovirus A12 FJ445116.1 2 20090411 185893 Human rhinovirus A13 strain ATCC VR-1123 DQ473493.1 2 20070628 185894 Human rhinovirus A15 L24917.1 3 20000304 31708 Human rhinovirus A16 type 16 polyprotein gene FJ445118.1 2 20090411 147674 Human rhinovirus A18 strain ATCC VR-1128 FJ445119.1 2 20090411 185895 Human rhinovirus A19 strain ATCC VR-1129 FJ445120.1 2 20090411 147675 Human rhinovirus A20 strain ATCC VR-1130 FJ445121.1 2 20090411 44128 Human rhinovirus A21 strain ATCC VR-1131 FJ445122.1 2 20090411 185896 Human rhinovirus A22, strain ATCC VR-1132 DQ473497.1 2 20070628 12135 Human rhinovirus A23 FJ445190.1 2 20090411 185897 Human rhinovirus A24, strain ATCC VR-1134 FJ445123.1 2 20090411 185898 Human rhinovirus A25 strain ATCC VR-1135 DQ473508.1 2 20070628 147672 Human rhinovirus A28 FJ445125.1 2 20090411 44129 Human rhinovirus A29.strain ATCC VR-1139 FJ445179.1 2 20090411 185901 Human rhinovirus A30, strain ATCC VR-1140 FJ445126.1 2 20090411 185902 Human rhinovirus A31, strain ATCC VR-506 FJ445127.1 2 20090411 185903 Human rhinovirus A32 strain ATCC VR-1142 FJ445128.1 2 20090411 185904 Human rhinovirus A33, strain ATCC VR-330 FJ445189.1 2 20090411 185905 Human rhinovirus A34 strain ATCC VR-1144 DQ473505.1 2 20070628 147673 Human rhinovirus A36 FJ445180.1 2 20090411 185906 Human rhinovirus A38 strain ATCC VR-1148 AY751783.1 2 20050413 185907 Human rhinovirus A39 FJ445129.1 2 20090411 185908 Human rhinovirus A40 strain ATCC VR-341 DQ473491.1 2 20070628 185909 Human rhinovirus A41 FJ445131.1 2 20090411 167321 Human rhinovirus A43 strain ATCC VR-1153 DQ473499.1 2 20070628 185910 Human rhinovirus A44 FJ445132.1 2 20090411 147676 Human rhinovirus A45 strain ATCC VR-1155 DQ473506.1 2 20070628 167324 Human rhinovirus A46 FJ445133.1 2 20090411 185911 Human rhinovirus A47 strain ATCC VR-1157 FJ445134.1 2 20090411 44131 Human rhinovirus A49 isolate FO4 FJ445135.1 2 20090411 44132 Human rhinovirus A50 strain ATCC VR-517 FJ445136.1 2 20090411 185912 Human rhinovirus A51 strain ATCC VR-1161 DQ473507.1 2 20070628 185913 Human rhinovirus A53 FJ445138.1 2 20090411 185914 Human rhinovirus A54 strain ATCC VR-1164 DQ473511.1 2 20070628 185915 Human rhinovirus A55 FJ445140.1 2 20090411 185916 Human rhinovirus A56 strain ATCC VR-1166 FJ445141.1 2 20090411 185917 Human rhinovirus A57 isolate fs ship#1-hrv-57 FJ445142.1 2 20090411 44133 Human rhinovirus A58 strain ATCC VR-1168 DQ473500.1 2 20070628 185918 Human rhinovirus A59 FJ445143.1 2 20090411 185919 Human rhinovirus A60 strain ATCC VR-1473 FJ445144.1 2 20090411 185920 Human rhinovirus A61 strain ATCC VR-1171 FJ445145.1 2 20090411 44134 Human rhinovirus A62 strain ATCC VR-1172 FJ445146.1 2 20090411 185921 Human rhinovirus A63 strain ATCC VR-1173 FJ445181.1 2 20090411 185922 Human rhinovirus A64 strain ATCC VR-1174 FJ445147.1 2 20090411 44135 Human rhinovirus A65 strain ATCC VR-1175 FJ445148.1 2 20090411 185923 Human rhinovirus A66 strain ATCC VR-1176 FJ445149.1 2 20090411 185924 Human rhinovirus A67 strain ATCC VR-1177 FJ445150.1 2 20090411 185925 Human rhinovirus A68 strain ATCC VR-1178 FJ445152.1 2 20090411 185927 Human rhinovirus A71 strain ATCC VR-1181 DQ473492.1 2 20070628 185928 Human rhinovirus A73 DQ473494.1 2 20070628 185929 Human rhinovirus A74 DQ473510.1 2 20070628 185930 Human rhinovirus A75 FJ445182.1 2 20090411 185931 Human rhinovirus A76 strain ATCC VR-1186 FJ445154.1 2 20090411 185932 Human rhinovirus A77 strain ATCC VR-1187 FJ445183.1 2 20090411 147685 Human rhinovirus A78 strain ATCC VR-1188 FJ445156.1 2 20090411 185934 Human rhinovirus A80 strain ATCC VR-1190 FJ445157.1 2 20090411 185935 Human rhinovirus A81 strain ATCC VR-1191 FJ445160.1 2 20090411 167322 Human rhinovirus A82 strain ATCC VR-1192 FJ445163.1 2 20090411 185937 Human rhinovirus A85 strain ATCC VR-1195 DQ473504.1 2 20070628 185939 Human rhinovirus A88 FJ445165.1 2 20090411 12132 Human rhinovirus A89 isolate F09 FJ445167.1 2 20090411 185940 Human rhinovirus A90 strain ATCC VR-1291 FJ445185.1 2 20090411 185941 Human rhinovirus A94 strain ATCC VR-1295 FJ445170.1 2 20090411 185942 Human rhinovirus A95 strain ATCC VR-1301 FJ445171.1 2 20090411 185943 Human rhinovirus A96 strain ATCC VR-1296 FJ445173.1 2 20090411 185944 Human rhinovirus A98 strain ATCC VR-1298 FJ445175.1 2 20090411 185946 Human rhinovirus A100 strain ATCC VR-1300 GQ415051.1 3 20100116 147711 Rhinovirus A isolate hrv-A101 DQ473485.1 2 20070628 44130 Human rhinovirus B3 DQ473490.1 2 20070628 185889 Human rhinovirus B4 FJ445112.1 2 20090411 147714 Human rhinovirus B5 strain ATCC VR-485 DQ473486.1 2 20070628 147681 Human rhinovirus B6 K02121.1 4 20010103 12131 Human rhinovirus B14 EF173420.1 1 20070716 150904 Human rhinovirus B17 FJ445124.1 2 20090411 185899 Human rhinovirus B26 strain ATCC VR-1136 FJ445186.1 2 20090411 185900 Human rhinovirus B27 strain ATCC VR-1137 FJ445187.1 2 20090411 167329 Human rhinovirus B35 strain ATCC VR-1145 EF173423.1 1 20070716 147680 Human rhinovirus B37 FJ445130.1 2 20090411 147683 Human rhinovirus B42 strain ATCC VR-338 DQ473488.1 2 20070628 147679 Human rhinovirus B48 FJ445188.1 2 20090411 147677 Human rhinovirus B52 strain ATCC VR-1162 FJ445151.1 2 20090411 147678 Human rhinovirus B69, strain ATCC VR-1179 DQ473489.1 2 20070628 185926 Human rhinovirus B70 FJ445153.1 2 20090411 44137 Human rhinovirus B72 strain ATCC VR-1182 FJ445155.1 2 20090411 185933 Human rhinovirus B79 strain ATCC VR-1189 FJ445161.1 2 20090411 185936 Human rhinovirus B83 strain ATCC VR-1193 FJ445162.1 2 20090411 167328 Human rhinovirus B84 strain ATCC VR-1194 FJ445164.1 2 20090411 185938 Human rhinovirus B86 strain ATCC VR-1196 FJ445168.1 2 20090411 167325 Human rhinovirus B91 strain ATCC VR-1292 FJ445169.1 2 20090411 167326 Human rhinovirus B92, strain ATCC VR-1293 EF173425.1 1 20070716 167327 Human rhinovirus B93 FJ445172.1 2 20090411 167330 Human rhinovirus B97, strain ATCC VR-1297 FJ445174.1 2 20090411 185945 Human rhinovirus B99, strain ATCC VR-1299 KF958308.1 3 20140515 147712 Rhinovirus B isolate 3039 GQ323774.1 2 20100325 655428 Human rhinovirus QCE, strain QCE EF582386.1 1 20071114 463676 Rhinovirus C strain 025 KF311065.1 2 20141023 1408133 Rhizoctonia cerealis endornavirus 1 AB558119.1 2 20130922 758865 Rhizophagus sp. RF1 medium virus HQ128706.1 3 20101122 878260 Rhododendron virus A AF022937.1 3 19981217 66834 Rhopalosiphum padi virus AY609301.1 2 20050416 291589 Trichechus manatus papillomavirus 1 AM999981.1 2 20150307 529680 Rhynchosia yellow mosaic virus, segment DNA-A AM999982.1 2 20150307 529680 Rhynchosia yellow mosaic virus, segment DNA-B GQ401365.1 6 20120722 51680 Ribgrass mosaic virus - Actinidia strain-AC HF954993.1 1 20140605 10990 Rice black streaked dwarf virus segment S9, isolate AH-MX8 AB009656.1 3 20030707 66266 Rice grassy stunt virus RNA1 AB010376.1 3 20030707 66266 Rice grassy stunt virus RNA2 AB010377.1 4 20030707 66266 Rice grassy stunt virus RNA3 AB010378.1 4 20030707 66266 Rice grassy stunt virus RNA4 AB000403.1 4 20030707 66266 Rice grassy stunt virus RNA5 AB000404.1 4 20030707 66266 Rice grassy stunt virus RNA6 D31879.1 6 20030707 12331 Rice stripe virus RNA1 D13176.1 7 20030521 12331 Rice stripe virus RNA2 X53563.1 3 20000222 12331 Rice stripe virus RNA3 D10979.1 8 20080216 12331 Rice stripe virus RNA4 AF076470.1 3 20010608 10654 Rice tungro bacilliform virus M95497.1 8 20000304 35287 Rice tungro spherical virus AB064963.1 2 20030707 35287 Rice tungro spherical virus strain Vt6 U23142.1 2 20000304 31744 Rice yellow mottle virus AJ608215.1 1 20040317 31744 Rice yellow mottle virus isolate Tz11 AB516283.1 1 20100305 59380 Rice yellow stunt virus X56464.1 6 20030327 11588 Rift Valley fever virus segment L M11157.1 3 20000304 11588 Rift Valley fever virus segment M X53771.1 6 19990210 11588 Rift Valley fever virus segment S GU168576.1 3 20110505 11241 Rinderpest virus AF144692.1 2 20050415 64285 Rio Bravo virus KC815310.1 1 20130421 1281454 Rodent hepacivirus isolate RHV-339 KC815311.1 1 20130421 1321391 Rodent pegivirus isolate CC61 X01457.1 3 20050418 10799 H-1 parvovirus M81888.1 3 20040909 35339 LuIII virus J02275.1 5 20061114 10794 Minute virus of mice U12469.1 5 20050417 35340 Mouse parvovirus 1 DQ898166.1 1 20060925 402802 Mouse parvovirus 1e JF755402.1 2 20110928 1074214 Rodent stool-associated circular genome virus strain RodSCV_M-89 KJ194622.1 3 20140625 1514664 Rodent Torque teno virus 1 isolate AS_1012_Fae_2 KJ194615.1 3 20140625 1514665 Rodent Torque teno virus 2 isolate AS_1014_Fae_3 KC166238.1 3 20131212 535898 Rosa rugosa leaf distortion virus isolate MN-3 KJ158169.1 1 20140501 1511807 Rosavirus A2 strain GA7403 GQ478342.1 2 20140828 875323 Rose leaf curl virus clone RoLCuV-[PK,Fai,06] KJ748003.1 1 20140916 1543207 Rose leaf rosette-associated virus isolate RLRaV-CWR.1 EU024678.1 1 20080604 474454 Rose spring dwarf-associated virus JX028536.1 3 20130410 1213588 Rose yellow vein virus strain RYVV-MN1 AB915829.1 2 20140814 1476202 Rosellinia necatrix fusarivirus 1 genomic RNA strain: NW10 EF011023.1 2 20071101 97469 Alphavirus M1 M20162.1 5 20050417 11029 Ross River virus AB032553.1 4 20050414 59303 Sagiyama virus AY494848.1 2 20050220 259931 Ross's goose hepatitis B virus AF110996.1 3 20000303 89623 Snow goose hepatitis B virus HG513046.1 1 20140902 10941 Human rotavirus A segment 2, VP2 gene for VP2, strain RVA/Human_wt/VNM/30378/2009/G26P[19] V01197.1 8 20071115 11886 Rous sarcoma virus EF065513.1 1 20070210 424367 Bat coronavirus HKU9-1 EF065514.1 1 20070210 424368 Bat coronavirus HKU9-2 EF065515.1 1 20070210 424369 Bat coronavirus HKU9-3 EF065516.1 1 20070210 424370 Bat coronavirus HKU9-4 HM211098.1 2 20101010 875614 Bat coronavirus HKU9-5-1 HM211099.1 2 20101010 875615 Bat coronavirus HKU9-5-2 HM211100.1 2 20101010 875612 Bat coronavirus HKU9-10-1 HM211101.1 2 20101010 875613 Bat coronavirus HKU9-10-2 AY863002.1 2 20050417 64287 Karshi virus strain LEIV 2247 AF188704.1 1 20000120 11041 Rubella virus JX277553.1 2 20130129 1243178 Rubus canadensis virus 1 isolate BM-01 FJ493469.1 1 20090113 587370 Rudbeckia flower distortion virus isolate KC876045.1 3 20140725 1163708 Rupicapra rupicapra papillomavirus 1 Y09854.1 3 20050418 40666 Ryegrass mosaic virus EF091714.1 2 20070801 119910 Ryegrass mottle virus AY358026.2 2 20030829 45709 Sabia virus segment L U41071.1 2 20000304 45709 Sabia virus segment S AF092924.1 3 20050415 89463 Sacbrood virus HM237361.1 2 20110904 886669 Sacbrood virus CSBV-LN/China/2009 U78817.1 4 20000304 12450 Saccharomyces cerevisiae killer virus M1 U01060.1 6 20000304 42478 Saccharomyces cerevisiae virus L-BC (La) GQ273988.1 1 20091102 683179 Saccharum streak virus U72332.1 5 20050418 52274 Saguaro cactus virus JX159989.1 7 20140620 1236410 Saimiri sciureus polyomavirus 1 HM625781.1 2 20110216 10353 Saimiriine herpesvirus 1 strain MV 5-4 X64346.1 9 20061114 10381 Saimiriine herpesvirus 2 JQ697837.1 2 20121017 120499 Salem virus GQ184145.1 2 20130516 1330524 Salivirus A isolate 02394-01 JN379039.1 2 20130508 1330996 Salivirus CH KM023140.1 1 20140925 1547495 Salivirus FHB JQ799139.1 2 20121127 1183064 Salmonid alphavirus subtype 3 isolate H10 AJ316246.1 2 20050415 78540 Sleeping disease virus X89628.1 4 20031130 11590 Toscana virus segment M X53794.1 1 19910311 11590 Toscana virus segment S KM350503.1 1 20141009 1552661 Santa barbara virus strain AR775619 HQ875059.1 2 20150422 686984 Sapelovirus A strain csh AF182760.1 2 20050415 106333 Porcine enteric sapovirus AY603425.1 3 20060122 290314 Sapovirus C12 DQ058829.1 2 20060826 334584 Sapovirus Ehime1107/2002/JP AY694184.2 3 20070202 291175 Sapovirus Hu/Dresden/pJG-Sap01/DE JX993277.1 1 20131126 1346530 Sapovirus Hu/G1/BE-HPI01/DE/2012 AB614356.1 3 20120813 985691 Sapovirus Hu/GI.2/BR-DF01/BRA/2009 RNA HM002617.1 1 20100509 758863 Sapovirus Hu/GI/Sapporo/MT-2010/1982 AB775659.2 4 20150227 1280920 Sapovirus Hu/Nagoya/NGY-1/2012/JPN KF204570.1 2 20140828 1401324 Sapovirus pig/Gansu/CH430/2012/CHN KJ508818.1 4 20140515 1471436 Sapovirus pig/GVI/OH-JJ674/2000/US FJ387164.1 2 20100421 638664 Sapovirus pig/sav1/2008/CHN AJ316084.1 3 20050415 157018 Scallion mosaic virus KC610514.1 1 20130319 1300323 Scheffersomyces segobiensis virus L isolate NRRL Y-11571 KP090203.1 1 20150131 253700 Schlumbergera virus X isolate Palma-PE AB012756.1 5 20050414 75914 Sclerophthora macrospora virus B JQ513382.1 2 20120821 1181310 Sclerotinia sclerotiorum dsRNA mycovirus-L isolate Sunf-M KJ123645.1 2 20140828 1478132 Sclerotinia sclerotiorum endornavirus 2 isolate 11691 KC852908.1 1 20130707 1353016 Sclerotinia sclerotiorum endornavirus-1 strain JZJL2 GQ365709.1 2 20100522 664785 Sclerotinia sclerotiorum hypovirulence associated DNA virus 1 JF781304.1 2 20110908 1074325 Sclerotinia sclerotiorum hypovirus 1 strain SZ-150 KF525367.1 1 20131126 1423347 Sclerotinia sclerotiorum hypovirus 2 isolate 5472 JQ013377.1 2 20120520 1133727 Sclerotinia sclerotiorum mitovirus 1 KJ463570.1 2 20150219 1494074 Sclerotinia sclerotiorum mitovirus 1 HC025 JQ013378.1 2 20120520 1133728 Sclerotinia sclerotiorum mitovirus 2 KJ186782.1 2 20140822 1483724 Sclerotinia sclerotiorum negative-stranded RNA virus 1 strain AH98 HQ003891.1 2 20110316 936149 Scophthalmus maximus rhabdovirus KM282376.1 1 20141009 1552409 Sea otter polyomavirus 1 isolate 6831-13 EU867817.1 3 20090410 575913 Sea Turtle Tornovirus 1 KF373760.1 1 20131126 1427157 Seal anellovirus 2 KF373758.1 1 20131126 1427156 Seal anellovirus 3 KM262785.1 1 20141229 1566012 Seal anellovirus 6 isolate SeAv6-PV13-431 KM262781.1 1 20141229 1566009 Seal anellovirus 7 isolate SeAv7-PV13431 HQ287751.1 2 20110527 991022 Seal anellovirus TFFN/USA/2006 X04129.1 13 20010313 11033 Semliki forest virus M69046.1 6 20050417 11191 Sendai virus AY273791.1 1 20030515 11608 Seoul virus segment S X56492.1 6 20030509 12557 Seoul virus 80-39 segment L S47716.1 6 20040901 12557 Seoul virus 80-39 segment M DQ837642.1 1 20061222 44026 Sepik virus strain MK7148 AY004291.2 4 20060903 12558 Sesbania mosaic virus JX993988.1 1 20130611 1283333 Bat coronavirus Cp/Yunnan2011 JX993987.1 1 20130611 1283332 Bat coronavirus Rp/Shaanxi2011 DQ648856.1 1 20060720 389166 Bat CoV 273/2005 DQ648857.1 1 20060720 389167 Bat CoV 279/2005 GQ153539.1 1 20100407 742001 Bat SARS coronavirus HKU3-4 GQ153540.1 1 20100407 742002 Bat SARS coronavirus HKU3-5 GQ153541.1 1 20100407 742003 Bat SARS coronavirus HKU3-6 GQ153542.1 1 20100407 742004 Bat SARS coronavirus HKU3-7 GQ153543.1 1 20100407 742005 Bat SARS coronavirus HKU3-8 GQ153544.1 1 20100407 742006 Bat SARS coronavirus HKU3-9 GQ153545.1 1 20100407 741997 Bat SARS coronavirus HKU3-10 GQ153546.1 1 20100407 741998 Bat SARS coronavirus HKU3-11 GQ153547.1 1 20100407 741999 Bat SARS coronavirus HKU3-12 GQ153548.1 1 20100407 742000 Bat SARS coronavirus HKU3-13 DQ412042.1 1 20060714 347537 Bat SARS CoV Rf1/2004 DQ412043.1 1 20060714 347536 Bat SARS CoV Rm1/2004 KC881006.1 3 20140515 1415834 Bat SARS-like coronavirus Rs3367 KC881005.1 3 20140515 1415851 Bat SARS-like coronavirus RsSHC014 KF367457.1 1 20131111 1415852 Bat SARS-like coronavirus WIV1 KF569996.1 2 20140530 1487703 Rhinolophus affinis coronavirus isolate LYRa11 DQ898174.1 2 20090508 227859 SARS coronavirus strain CV7 AY278488.2 4 20090903 228407 SARS coronavirus BJ01 AY864805.1 1 20060608 321147 SARS coronavirus BJ162 EU371562.1 1 20090107 511430 SARS coronavirus BJ182-4 EU371563.1 1 20090107 511431 SARS coronavirus BJ182-8 EU371564.1 1 20090107 511429 SARS coronavirus BJ182-12 EU371560.1 1 20090107 511432 SARS coronavirus BJ182a EU371561.1 1 20090107 511433 SARS coronavirus BJ182b AY864806.1 2 20060915 321149 SARS coronavirus BJ202 AY278554.2 10 20060111 228415 SARS coronavirus CUHK-W1 FJ882954.1 2 20100602 627440 SARS coronavirus ExoN1 DQ640652.1 1 20060613 388737 SARS coronavirus GDH-BJH01 AY515512.1 1 20050101 260069 SARS coronavirus HC/SZ/61/03 AY278491.2 2 20030830 228404 SARS coronavirus HKU-39849 FJ882945.1 1 20091216 633137 SARS coronavirus MA15 FJ882942.1 1 20091216 633140 SARS coronavirus MA15 ExoN1 FJ882963.1 1 20090512 627442 SARS coronavirus P2 AY350750.1 2 20060111 253433 SARS coronavirus PUMC01 AY357075.1 2 20060111 253434 SARS coronavirus PUMC02 AY357076.1 2 20060111 253435 SARS coronavirus PUMC03 AY274119.3 6 20060111 227984 SARS Coronavirus Tor2 AY278741.1 4 20060111 228330 SARS coronavirus Urbani AY394850.2 4 20050511 247149 SARS coronavirus WHU FJ882935.1 2 20100602 698419 SARS coronavirus wtic-MB EU371559.1 1 20090107 353145 SARS coronavirus ZJ02 KJ547620.1 5 20150215 1519385 Sewage-associated circular DNA virus-1 isolate SaCV-1_NZ-BS3349-2012 KJ547626.2 5 20150215 1519391 Sewage-associated circular DNA virus-2 isolate SaCV-2_NZ-BS4000-2012 KJ547627.1 5 20150215 1519392 Sewage-associated circular DNA virus-3 isolate SaCV-3_NZ-BS3854-2012 KJ547628.1 5 20150215 1519393 Sewage-associated circular DNA virus-4 isolate SaCV-4_NZ-BS3799-2012 KJ547629.1 5 20150215 1519394 Sewage-associated circular DNA virus-5 isolate SaCV-5_NZ-BS3901a-2012 KJ547630.1 5 20150215 1519395 Sewage-associated circular DNA virus-6 isolate SaCV-6_NZ-BS4017-2012 KJ547631.1 5 20150215 1519396 Sewage-associated circular DNA virus-7 isolate SaCV-7_NZ-BS3976-2012 KJ547632.1 5 20150215 1519397 Sewage-associated circular DNA virus-8 isolate SaCV-8_NZ-BS4075-2012 KJ547633.1 5 20150215 1519398 Sewage-associated circular DNA virus-9 isolate SaCV-9_NZ-BS3681-2012 KJ547621.1 5 20150215 1519386 Sewage-associated circular DNA virus-10 isolate SaCV-10_NZ-BS3946-2012 KJ547622.1 5 20150215 1519387 Sewage-associated circular DNA virus-11 isolate SaCV-11_NZ-BS3997-2012 KJ547623.1 5 20150215 1519388 Sewage-associated circular DNA virus-12 isolate SaCV-12_NZ-BS3888-2012 KJ547624.1 5 20150215 1519389 Sewage-associated circular DNA virus-13 isolate SaCV-13_NZ-BS4044-2012 KJ547625.1 5 20150215 1519390 Sewage-associated circular DNA virus-14 isolate SaCV-14_NZ-BS4064-2012 KM821750.1 2 20150215 1592082 Sewage-associated circular DNA virus-15 isolate SaCV-15_NZ-BS3557-2012 KM821751.1 2 20150215 1592083 Sewage-associated circular DNA virus-16 isolate SaCV-16_NZ-BS3759-2012 KM821752.1 2 20150215 1592084 Sewage-associated circular DNA virus-17 isolate SaCV-17_NZ-BS4236-2012 KM821753.1 2 20150215 1592085 Sewage-associated circular DNA virus-18 isolate SaCV-18_NZ-BS3994-2012 KM821754.2 3 20150215 1592086 Sewage-associated circular DNA virus-19 isolate SaCV-19_NZ-BS4128-2012 KM821755.2 3 20150215 1592087 Sewage-associated circular DNA virus-20 isolate SaCV-20_NZ-BS3900-2012 KM821756.1 2 20150215 1592088 Sewage-associated circular DNA virus-21 isolate SaCV-21_NZ-BS4169-2012 KM821757.1 2 20150215 1592089 Sewage-associated circular DNA virus-22 isolate SaCV-22_NZ-BS4155-2012 KM821758.1 2 20150215 1592090 Sewage-associated circular DNA virus-23 isolate SaCV-23_NZ-BS4025-2012 KM821759.1 2 20150215 1592091 Sewage-associated circular DNA virus-24 isolate SaCV-24_NZ-BS4091-2012 KM821760.1 2 20150215 1592092 Sewage-associated circular DNA virus-25 isolate SaCV-25_NZ-BS4281-2012 KM821761.1 2 20150215 1592093 Sewage-associated circular DNA virus-26 isolate SaCV-26_NZ-BS4339-2012 KM821762.1 2 20150215 1592094 Sewage-associated circular DNA virus-27 isolate SaCV-27_NZ-BS4103-2012 KM821763.1 2 20150215 1592095 Sewage-associated circular DNA virus-28 isolate SaCV-28_NZ-BS4064a-2012 KM821764.1 2 20150215 1592096 Sewage-associated circular DNA virus-29 isolate SaCV-29_NZ-BS4325-2012 KM821765.1 2 20150215 1592097 Sewage-associated circular DNA virus-30 isolate SaCV-30_NZ-BS4120-2012 KM821766.1 2 20150215 1592098 Sewage-associated circular DNA virus-31 isolate SaCV-31_NZ-BS4358-2012 KM821767.1 2 20150215 1592099 Sewage-associated circular DNA virus-32 isolate SaCV-32_NZ-BS4194-2012 KM821768.1 2 20150215 1592100 Sewage-associated circular DNA virus-33 isolate SaCV-33_NZ-BS4147-2012 KM821769.1 2 20150215 1592101 Sewage-associated circular DNA virus-34 isolate SaCV-34_NZ-BS4221-2012 KM821770.1 2 20150215 1592102 Sewage-associated circular DNA virus-35 isolate SaCV-35_NZ-BS4050-2012 KM821748.1 2 20150215 1592103 Sewage-associated circular DNA virus-36 isolate SaCV-36_NZ-BS3974-2012 KM821749.1 2 20150215 1592104 Sewage-associated circular DNA virus-37 isolate SaCV-37_NZ-BS2945-2012 KM821747.1 2 20150215 1592081 Sewage-associated gemycircularvirus-1 isolate SaGmV-1_NZ-BS3970-2012 AJ292226.1 1 20020206 12458 Garlic latent virus isolate YH1 JF320811.1 2 20120224 12172 Shallot latent virus isolate WA-1 JX310755.1 2 20130128 31770 Shallot virus X strain Russian AJ865076.1 1 20050928 62059 Shallot yellow stripe virus, isolate ZQ2 KP890267.1 1 20150424 1634381 Sheep polyomavirus 1 isolate VH4-S14 from USA AY494852.1 2 20050220 259898 Sheldgoose hepatitis B virus GU170201.1 1 20100324 746543 Shimoni bat virus KF741227.1 4 20140515 1476208 Sicinivirus 1 strain UCC001 FN436001.1 2 20150307 666145 Sida Brazil virus segment DNA A FN436002.1 2 20150307 666145 Sida Brazil virus segment DNA B JX162595.1 1 20120826 929767 Sida golden mosaic Braco virus-[Jamaica:Liguanea:2008] clone pBrA4 JX162591.1 1 20120826 929769 Sida golden mosaic Buckup virus-[Jamaica:St. Elizabeth:2004] clone pBuA9 U77963.1 5 20050418 223315 Sida golden mosaic Florida virus-USA Y11097.1 6 20050418 223316 Sida golden mosaic Honduras virus segment A Y11098.1 5 20030313 223316 Sida golden mosaic Honduras virus segment B AF049336.1 2 20050415 51034 Sida golden mosaic virus DNA-A AF039841.1 2 20040619 51034 Sida golden mosaic virus DNA-B HM626517.1 1 20110522 1032477 Sida golden mosaic virus - whitefly VEM Citra Florida U77964.1 5 20050418 223318 Sida golden yellow vein virus-[A11] DNA-A JX162593.1 1 20120826 929766 Sida golden yellow vein virus-[Jamaica:Liguanea2:2008] clone pBrB2 AM050730.1 5 20060928 337823 Sida leaf curl virus isolate Hn57 AM050734.1 5 20060928 337825 Sida leaf curl virus-associated DNA 1 AM050732.1 5 20060928 337824 Sida leaf curl virus-associated DNA beta, isolate Hn57 AM050733.1 5 20060928 337824 Sida leaf curl virus-associated DNA beta, isolate Hn60 FN436003.1 2 20150307 228897 Sida micrantha mosaic virus segment DNA A FN436004.1 2 20150307 228897 Sida micrantha mosaic virus segment DNA B AY090555.1 4 20050416 223319 Sida mottle virus-[Brazil] DNA-A AJ810096.1 3 20140401 290090 Sida yellow mosaic China virus - [Hainan 8] AY090558.1 4 20050416 223320 Sida yellow mosaic virus-[Brazil] DNA-A AJ810093.1 3 20050519 291270 Sida yellow mosaic virus-[China]-associated DNA beta AM259382.1 2 20070307 420255 Sida yellow vein Madurai virus JF682838.1 1 20111002 371401 Siegesbeckia yellow vein virus isolate Fz11 AM183224.1 3 20070324 371463 Siegesbeckia yellow vein virus-[GD13] isolate GD13 AM230634.1 2 20070324 371402 Siegesbeckia yellow vein virus-[GD24] isolate GD24 AM230635.1 2 20070324 371403 Siegesbeckia yellow vein virus-[GD27] isolate [GD27] JF682839.1 1 20111002 393034 Siegesbeckia yellow vein virus-associated DNA beta AM230643.1 3 20070324 371411 Siegesbeckia yellow vein virus-[GD13]-associated DNA beta isolate GD13 AM230644.1 2 20070324 371412 Siegesbeckia yellow vein virus-[GD24]-associated DNA beta isolate GD24 AM230645.1 2 20070324 371413 Siegesbeckia yellow vein virus-[GD27]-associated DNA beta isolate GD27 KF530058.1 2 20140718 1424280 Sierra Nevada virus AY684126.1 2 20050416 291590 Erethizon dorsatum papillomavirus 1 JQ011378.1 2 20120605 1126411 Silurus glanis circovirus isolate H6 DQ792570.1 2 20070712 10532 Simian adenovirus 7 FJ025931.1 5 20120311 909210 Simian adenovirus 18 HQ605912.1 1 20110527 585059 Simian adenovirus 20 strain ATCC VR-541 HQ241819.1 1 20110315 995022 Simian adenovirus 49 isolate C24948 HQ241820.1 1 20110315 995023 Simian adenovirus 50 isolate 18222 JN880448.1 2 20120713 1159186 Simian adenovirus A1139 JN880449.1 2 20120713 1159187 Simian adenovirus A1163 JN880450.1 2 20120713 1159188 Simian adenovirus A1173 JN880451.1 2 20120713 1159189 Simian adenovirus A1258 JN880452.1 2 20120713 1159190 Simian adenovirus A1285 JN880453.1 2 20120713 1159191 Simian adenovirus A1296 JN880454.1 2 20120713 1159192 Simian adenovirus A1312 JN880455.1 2 20120713 1159193 Simian adenovirus A1327 JN880456.1 2 20120713 1159194 Simian adenovirus A1335 KC693021.1 1 20130429 1165908 Simian adenovirus B isolate BaAdV-1 KC693024.1 1 20130429 1324794 Simian adenovirus C isolate BaAdV-4 KM190146.1 1 20141023 1560346 Simian adenovirus DM-2014 isolate 23336 GU356395.1 1 20100401 747493 Common marmoset foamy virus Y07725.1 3 20050418 11641 Human foamy virus U21247.1 5 20061114 11963 Human spumaretrovirus U04327.1 4 20050417 11642 Simian foamy virus HM245790.1 2 20110309 41858 Simian foamy virus-gorilla EU010385.1 2 20071116 472571 Spider monkey foamy virus GU356394.1 1 20100401 747492 Squirrel monkey foamy virus AF180391.2 8 20141210 38143 Simian hemorrhagic fever virus M58410.1 4 20060401 11723 Simian immunodeficiency virus X52154.1 10 20050418 11723 Simian immunodeficiency virus clone 1a AF328295.1 2 20050415 11723 Simian immunodeficiency virus strain SIVmnd14cg KF029431.1 1 20140204 1454033 Simian T-cell lymphotropic virus 4 isolate Ggo51573 AY598782.1 3 20061114 38420 Simian adenovirus 3 strain ATCC VR-1449 JQ776547.1 1 20120401 413259 Simian adenovirus 6 strain SV-39 from USA HQ241818.1 1 20110315 995021 Simian adenovirus 48 isolate AJ75 KP296858.1 1 20150304 1454041 Simian pegivirus isolate VGA00020 FJ979639.1 1 20100826 723802 Simian retrovirus 4 strain SRV4/TEX/2009/V3 AB611707.1 2 20130425 980635 Simian retrovirus Y proviral DNA strain: Y001 KP296853.1 2 20150314 1619219 Simian torque teno virus 31 isolate VGA00123.3 KP296854.1 2 20150314 1619220 Simian torque teno virus 32 isolate VGA00154.2 KP296855.1 2 20150314 1629656 Simian torque teno virus 33 isolate VWP00522.11 AY614708.1 3 20090304 46771 Simian virus 12 AF180737.1 3 20050415 10633 Simian virus 40 strain MC-028846B J02400.1 19 20061114 10633 Simian virus 40 AF041850.1 4 20091129 57667 Simian-Human immunodeficiency virus L37901.1 3 20000304 37705 Sin Nombre virus segment L L25783.1 7 20110605 37705 Sin Nombre virus segment M L25784.1 6 20110605 37705 Sin Nombre virus segment S HM147984.1 1 20120227 48540 Babanki virus KF981618.1 2 20140501 48542 Kyzylagach virus strain LEIV-65A M69205.1 6 20050417 31699 Ockelbo virus strain Edsbyn 82-5 AF103728.1 4 20050415 11034 Sindbis virus U38304.1 4 20050417 44419 Sindbis-like virus U38305.1 4 20050417 44419 Sindbis-like virus isolate S.A.AR86 AF103734.1 3 20050415 84272 Sindbis-like virus YN87448 AY666015.1 2 20050416 127569 Grouper iridovirus AY521625.1 2 20050416 262968 Singapore grouper iridovirus DQ399789.1 2 20070123 373862 Siniperca chuatsi rhabdovirus HM585353.1 1 20111204 886980 Skua siadenovirus A KP120516.1 1 20141211 1581151 Slow loris parvovirus 1 strain Buddha_08 AY622908.1 2 20050618 289366 Small anellovirus 1 AY622909.1 3 20060125 289367 Small anellovirus 2 U26458.1 3 20050417 40270 Snakehead retrovirus AF147498.1 1 19990929 103603 Snakehead virus AJ132576.1 4 20150307 100887 Soil-borne cereal mosaic virus RNA1 AJ132577.1 4 20150307 100887 Soil-borne cereal mosaic virus RNA2 L07937.1 7 20000304 28375 Soil-borne wheat mosaic virus RNA 1 L07938.1 7 20000304 28375 Soil-borne wheat mosaic virus RNA 2 KF917541.1 1 20150305 64317 Sokoluk virus strain LEIV-400K KC991097.1 1 20131105 1414671 Solenopsis invicta densovirus isolate SiDNV-Arg EF428566.1 2 20070818 439491 Solenopsis invicta virus 2 FJ528584.1 2 20090603 631345 Solenopsis invicta virus 3 L32603.1 9 20050417 11307 Sonchus yellow net virus KJ541740.1 1 20140518 32619 Sorghum mosaic virus isolate GX KF774436.1 1 20140130 1452514 Sosuga virus isolate 2012 AF055887.1 3 20050415 12139 Southern bean mosaic virus HM147990.1 2 20120311 1159195 Southern elephant seal virus FN563984.1 1 20101118 566568 Rice black-streaked dwarf virus 2 segment 2, isolate GD, complete segment FN563991.1 1 20101118 519497 Southern rice black-streaked dwarf virus segment 3, isolate HN EF442780.1 5 20091125 591166 Southern tomato virus KM110948.1 2 20141115 1546178 Southwest baboon virus 1 isolate SWBV_19466_4/14/2014 AM940437.1 2 20090106 378833 Sowbane mosaic virus HM163159.1 2 20101021 378833 Sowbane mosaic virus isolate SoMV-WA KC508643.1 2 20130501 761702 Soybean chlorotic blotch virus strain SbCBV7 X15828.2 14 20050418 10651 Soybean chlorotic mottle virus AB050781.1 4 20050414 223251 Soybean crinkle leaf virus-[Japan] AB038150.1 3 20030707 12049 Soybean dwarf virus strain:DP AB038149.1 3 20030707 12049 Soybean dwarf virus strain:DS AB038148.1 3 20030707 12049 Soybean dwarf virus strain:YP AB038147.1 3 20030707 12049 Soybean dwarf virus strain:YS GQ472984.1 1 20100513 761701 Soybean mild mottle virus EU871724.1 2 20081229 12222 Soybean mosaic virus isolate L HM590055.1 2 20110405 867160 Soybean mosaic virus 4469-4/CHN/2004 D00507.2 8 20050417 12223 Soybean mosaic virus N JQ926983.1 1 20120821 1221449 Soybean Putnam virus JF495127.1 2 20120216 1080798 Soybean yellow common mosaic virus FJ457015.1 2 20091010 578361 Soybean yellow mottle mosaic virus JQ065045.1 1 20120320 1159906 Sparrow coronavirus HKU17 strain HKU17-6124 AF038665.1 2 19990203 73497 Sphaeropsis sapinea RNA virus 1 AF039080.1 2 19990203 73498 Sphaeropsis sapinea RNA virus 2 HQ443515.1 1 20110203 945225 Spinach curly top Arizona virus isolate 09-10 spinach GU734126.2 2 20100921 873160 Spinach severe curly top virus KF660223.1 1 20131212 1432565 Spinach yellow vein Sikar virus clone AS22 EF506570.1 1 20071101 455649 Spiroplasma kunkelii virus SkV1_CR2-3x GU979419.1 1 20100719 862943 Spissistilus festinus virus 1 V01552.1 4 20050418 11820 Friend spleen focus-forming virus JN091707.1 1 20111115 1111710 Spodoptera exigua iflavirus 1 JN870848.1 1 20120905 1228012 Spodoptera exigua iflavirus 2 isolate Korean AF169823.1 4 20050415 10454 Spodoptera exigua multiple nucleopolyhedrovirus AM398843.1 4 20090819 113370 Spodoptera frugiperda ascovirus 1a KM371112.1 1 20150218 307454 Spodoptera frugiperda granulovirus isolate VG008 EF035042.2 4 20090909 10455 Spodoptera frugiperda multiple nucleopolyhedrovirus isolate 3AP2 KF947078.1 2 20140530 1481139 Spodoptera frugiperda rhabdovirus isolate Sf DQ288858.2 4 20091107 359919 Spodoptera litura granulovirus AF325155.1 2 20050415 46242 Spodoptera litura nucleopolyhedrovirus strain G2 EU780426.1 1 20081216 566270 Spodoptera litura nucleopolyhedrovirus II JQ948051.1 2 20121014 1302849 Sporobolus striate mosaic virus 1 isolate AU-3020_1-2011 JQ948052.1 2 20121014 1302850 Sporobolus striate mosaic virus 2 isolate AU-3020_2-2011 AJ318079.1 2 20020408 696863 Spring viraemia of carp virus EU606015.1 2 20080910 543939 Sputnik virophage EU487031.1 2 20110501 223323 Squash leaf curl China virus AF509743.1 4 20040402 269275 Squash leaf curl China virus - [B] segment DNA-A AF509742.1 5 20050415 269275 Squash leaf curl China virus - [B] segment DNA-B AB085793.1 6 20081213 269277 Squash leaf curl Philippines virus segment DNA-A AB085794.1 5 20081213 269277 Squash leaf curl Philippines virus segment DNA-B M38183.1 5 20050417 10829 Squash leaf curl virus component A M38182.1 4 20000304 10829 Squash leaf curl virus component B AJ420319.1 6 20050415 222474 Squash leaf curl Yunnan virus isolate Y23 EU259611.1 1 20080326 397544 Squash vein yellowing virus AM748741.2 3 20080318 452475 Squirrel monkey polyomavirus M23385.1 8 20070503 11857 Squirrel monkey retrovirus-H HE601899.1 2 20140203 240426 Squirrelpox virus strain Red squirrel UK AJ579307.1 8 20150307 475454 Sri Lankan cassava mosaic virus - [Ker20] segment A AJ579308.1 9 20150307 475454 Sri Lankan cassava mosaic virus - [Ker20] segment B AJ314737.1 6 20150307 223328 Sri Lankan cassava mosaic virus-[Colombo] DNA-A AJ314738.1 5 20150307 223328 Sri Lankan cassava mosaic virus-[Colombo] DNA-B FJ355928.1 2 20090630 520973 Calicivirus pig/AB90/CAN FJ355930.1 2 20090630 520974 Calicivirus pig/AB104/CAN FJ355929.1 2 20090630 520975 Calicivirus pig/F15-10/CAN DQ525916.1 1 20061207 11080 St. Louis encephalitis virus strain Kern217 AJ564743.2 4 20051020 269280 Stachytarpheta leaf curl virus - [Hn5.4] AJ564742.1 3 20051020 269281 Stachytarpheta leaf curl virus - [Hn6.1] AJ810156.1 2 20051020 289998 Stachytarpheta leaf curl virus - [Hn30] AJ810157.1 2 20051020 289999 Stachytarpheta leaf curl virus - [Hn34] DQ172906.1 1 20060504 349370 Starling circovirus EF195384.1 2 20081229 436911 Steller sea lion vesivirus JX463183.1 2 20130411 1277649 STL polyomavirus strain MA138 DQ860839.1 3 20070227 399314 Strawberry chlorotic fleck-associated virus AJ311875.1 2 20150307 167161 Strawberry mottle virus RNA1 AJ311876.1 2 20150307 167161 Strawberry mottle virus RNA2 KM233706.1 1 20141103 1564903 Strawberry polerovirus 1 isolate AB4101 X97304.1 4 20050418 47903 Strawberry vein banding virus AM040955.1 2 20060908 335187 Streptocarpus flower break virus AB056571.1 3 20030707 35297 Striped Jack nervous necrosis virus RNA1 AB056572.1 3 20030707 35297 Striped Jack nervous necrosis virus RNA2 JQ700308.2 2 20150429 646010 Suakwa aphid-borne yellows virus isolate SABYV-TW19 AY376452.1 3 20060111 12472 Subterranean clover mottle virus isolate MB KJ676450.1 1 20141030 1563660 Sucra jujuba nucleopolyhedrovirus isolate 473 AY729654.1 4 20060111 186540 Sudan ebolavirus strain Gulu JN638998.1 1 20120806 1216927 Sudan ebolavirus - Nakisamata KM460042.1 1 20141203 1577137 Suffolk virus isolate FI3 AJ277091.1 2 20051216 362398 Sugarcane bacilliform IM virus isolate Ireng Maleng FJ439817.1 2 20110908 12435 Sugarcane bacilliform virus AJ297628.1 3 20050415 12224 Sugarcane mosaic virus AF037752.1 6 20050415 268785 Sugarcane streak Egypt virus - [Giza] GQ388116.1 1 20100421 53954 Sugarcane streak mosaic virus AF072672.1 5 20050415 78395 Sugarcane streak Reunion virus EU244914.1 2 20080301 10836 Sugarcane streak virus KJ210622.1 5 20140801 1492296 Sugarcane white streak virus isolate SSNV-B [SD-B0069-2013] AF157029.1 3 20050415 94290 Sugarcane yellow leaf virus BK001744.1 4 20081018 10345 Suid herpesvirus 1 KF017583.1 1 20131009 1608255 Suid herpesvirus 2 strain BJ09 GU181199.1 2 20100619 129732 Sunflower chlorotic mottle virus JQ350738.1 1 20130415 715480 Sunflower mild mosaic virus isolate Entre Rios KF395226.1 2 20140625 1491491 Sunguru virus isolate Ug#41 JN192445.1 2 20120905 1195087 Sunshine virus EU056310.1 1 20080227 459957 Swan circovirus FJ560944.1 1 20090525 647294 Sweet potato badnavirus B GQ268228.1 1 20101119 450633 Sweet potato begomovirus strain SPBV-D-DNA-[6] JX212747.1 1 20120816 1307958 Sweet potato C6 virus isolate Sosa 29 HQ694978.1 2 20110421 930168 Sweet potato caulimo-like virus isolate Mad1 AY461421.1 4 20070324 263004 Sweet potato chlorotic fleck virus D86371.1 7 20060530 12844 Sweet potato feathery mottle virus FJ969829.1 2 20140625 688540 Sweet potato golden vein associated virus KC443039.1 2 20131022 31743 Sweet potato latent virus EU856365.2 1 20090618 652718 Sweet potato leaf curl Canary virus KC488316.1 3 20131216 1298534 Sweet potato leaf curl China Sichuan virus-[China:Sichuan15:2012] KF769447.1 4 20141106 225752 Sweet potato leaf curl Georgia virus isolate China:Hubei:2013 JX448368.1 2 20130926 1240597 Sweet potato leaf curl Georgia virus-[China: Hebei: 2011] KF156759.1 2 20150131 1605995 Sweet potato leaf curl Henan4 virus isolate China:Sichuan14:2012, KJ476507.1 1 20140425 1489311 Sweet potato leaf curl Henan virus isolate China:Henan10(2):2012 KC907406.1 3 20150321 1489311 Sweet potato leaf curl Henan virus isolate China:Henan10:2012 EU839579.2 1 20090618 574890 Sweet potato leaf curl Lanzarote virus HQ393477.1 4 20121114 994388 Sweet potato leaf curl Sao Paulo virus isolate SPLCSPV-[BR:AlvM:09] KJ013581.2 2 20140318 1392388 Sweet potato leaf curl Shanghai virus isolate China:Hubei1:2012 HQ333144.1 2 20110601 999288 Sweet potato leaf curl South Carolina virus isolate US:SC:648B-9 FJ151200.2 1 20090618 652717 Sweet potato leaf curl Spain virus FR751068.1 1 20110121 940846 Sweet potato leaf curl Uganda virus-[Uganda:Kampala:2008] FJ560719.1 1 20090123 590668 Sweet potato leaf curl Korean virus JX961671.1 1 20121028 100755 Sweet potato leaf curl virus isolate Gogumdo-25 FJ176701.1 4 20120613 1198220 Sweet potato leaf curl virus-Jiangsu, isolate SPLCV-JS EU856366.2 1 20090618 652719 Sweet potato leaf curl virus-Spain FJ969831.1 2 20140625 1513529 Sweet potato mosaic virus - [Brazil:Brasilia1:2007] isolate BR:BSB1 JQ621843.1 2 20141012 1560692 Sweet potato mosaic virus-[ZA:WP:2011]isolate PstI-01, HQ694979.1 2 20110421 995049 Sweet potato vein clearing virus strain Dom1 JN613807.1 2 20120802 453050 Sweet potato virus 2 isolate GWB-2 GU207957.1 2 20101202 930881 Sweet potato virus C JN613805.1 2 20120802 46619 Sweet potato virus G isolate GWB-G EU439428.2 3 20090630 505220 Swine parainfluenza virus 3 AF410153.1 2 20050415 10276 Swinepox virus JF727261.2 5 20120629 1027869 Switchgrass mosaic virus isolate S1 J04340.1 4 20040909 11631 Tacaribe virus segment L M20304.1 5 20000304 11631 Tacaribe virus segment S KM655868.1 1 20141228 1588048 Tadarida brasiliensis polyomavirus 1 KM655869.1 1 20141228 1588049 Tadarida brasiliensis polyomavirus 2 JN689227.1 1 20111204 1117633 Tailam virus strain TL8K KF260962.1 1 20131105 1414644 Tall oatgrass mosaic virus isolate Benesov KC460987.1 3 20130808 1338506 Talpa europaea papillomavirus isolate Bruges/22 AF346759.1 1 20041201 161675 Tamana bat virus AY924393.1 1 20071202 45223 Tamiami virus segment L AF485263.1 3 20030620 45223 Tamiami virus segment S JN389521.1 2 20140318 1081702 Tamus red mosaic virus isolate IT EF420157.1 1 20070913 99000 Tanapox virus isolate TPV-RoC AJ293568.1 3 20050415 132475 Yaba-like disease virus KF425264.1 4 20140529 1489714 Tanay virus isolate 11-5 KP710178.1 1 20150405 1634914 Taro bacilliform CH virus isolate TaBCHV-1 AY674964.1 2 20050416 303300 Taro vein chlorosis virus FJ492742.1 2 20091023 658423 Canine papillomavirus 7 JX141478.1 1 20120903 1226723 Canis familiaris papillomavirus 13 isolate Zurich/2011 AF277675.1 2 20020503 142102 Taura syndrome virus DQ851493.1 2 20080306 400394 Telosma mosaic virus isolate Hanoi JQ920421.1 2 20120927 1207926 Duck egg-drop syndrome virus strain duan JQ289550.1 1 20120228 1150860 Duck flavivirus TA KC990542.1 1 20130918 1399582 Duck Tembusu virus strain GX_2011 JX196334.1 1 20120918 1231621 Flavivirus White Kaiya duck/WR/China/2010 JX477686.1 3 20131126 93923 Sitiawan virus JF895923.2 4 20130410 64293 Tembusu virus strain JS804 KC113517.1 1 20130205 1288358 Tench rhabdovirus S64 KC790379.1 3 20140618 1508712 Tent-making bat hepatitis B virus isolate TBHBV/Pan376/Uro_bil/PAN/2010 KP266741.1 1 20150314 89464 Testudo hermanni ranavirus isolate CH8/96 KP271124.1 1 20150304 1554501 Teviot virus isolate Cedar Grove HM640935.2 5 20110907 944580 TGP Carmovirus 1 strain TGPCar1_091 KC145265.1 1 20130327 1307119 Theiler's disease-associated virus isolate HorseA1_serum EU376394.1 2 20081010 511755 Human TMEV-like cardiovirus EU815052.1 1 20080708 529419 Rat theilovirus 1 EF165067.2 3 20080405 434309 Saffold virus M20301.1 3 20000304 12124 Theiler's encephalomyelitis virus (STRAIN DA) X56019.1 7 20050418 12127 Theiler's encephalomyelitis virus (STRAIN GDVII) AB090161.1 4 20090116 204729 Theiler's-like virus of rats AF502599.1 4 20060216 197772 Thetapapillomavirus 1 JX848617.1 2 20130823 1352511 Thin paspalum asymptomatic virus strain 2005 Y17873.1 3 20030326 11569 Thogoto virus segment 1 AF004985.1 3 20110605 11569 Thogoto virus segment 2 AF006073.1 3 20110605 11569 Thogoto virus segment 3 M77280.1 5 20040909 11569 Thogoto virus segment 4 X96872.1 4 20030326 11569 Thogoto virus segment 5 AF527531.1 2 20030529 11569 Thogoto virus segment 6 DQ825770.1 3 20070828 262967 Thottapalayam virus segment L DQ825771.1 3 20070828 262967 Thottapalayam virus segment M AY526097.1 1 20040218 262967 Thottapalayam virus segment S FJ376621.1 3 20090101 572290 Thrush coronavirus HKU12-600 AJ851866.1 1 20050627 299200 Thunberg fritillary virus JN391187.1 2 20120605 1163537 Tianjin totivirus GQ294472.1 2 20110911 318844 Tibrogargan virus AF069066.1 2 20050415 11084 Tick-borne encephalitis virus KM610234.1 2 20150417 1546257 Tipula oleracea nudivirus isolate 35 FM242699.1 1 20091012 184020 Tobacco bushy top virus AJ421484.1 2 20030124 219596 Tobacco curly shoot betasatellite isolate Y35 GU199584.1 1 20091216 180526 Tobacco curly shoot virus GU001879.1 2 20100907 705074 Tobacco curly shoot virus - [SC118] AJ420318.1 7 20050721 222473 Tobacco curly shoot virus - [Y35] AJ457986.1 6 20050415 223250 Tobacco curly shoot virus - [Y41] M15239.1 3 20000304 12227 Tobacco etch virus FM955608.1 1 20100107 205323 Tobacco leaf curl betasatellite, clone MI23 EF620536.1 1 20080101 223332 Tobacco leaf curl Japan virus AB287439.1 3 20081214 417189 Tobacco leaf curl Japan virus-[Honeysuckle:Ibaraki] DQ871221.1 1 20070501 409287 Tobacco leaf curl Thailand virus FJ434943.1 1 20081216 67762 Tobacco leaf curl virus AJ512761.1 5 20050415 269282 Tobacco leaf curl Yunnan virus - [Y136] AJ512762.1 5 20050415 269283 Tobacco leaf curl Yunnan virus - [Y143] AJ566744.1 3 20040906 269284 Tobacco leaf curl Yunnan virus - [Y161] AF350330.1 4 20050415 223337 Tobacco leaf curl Zimbabwe virus M34077.1 4 20120404 12241 Tobacco mild green mosaic virus AB078435.1 5 20080621 12241 Tobacco mild green mosaic virus strain:Japanese HE818438.1 1 20120521 12242 Tobacco mosaic virus isolate Pingtan-1 FR878069.1 1 20120110 1052902 Tobacco mosaic virus strain Ohio V V01468.1 3 19930912 12881 Tobacco necrosis satellite virus AY546104.1 3 20080227 12055 Tobacco necrosis virus A D00942.1 12 20091008 12056 Tobacco necrosis virus D AF166084.1 3 20040619 12295 Tobacco rattle virus segment RNA1 strain PpK20 Z36974.2 12 20031021 12295 Tobacco rattle virus segment RNA2 EF219408.1 1 20071103 33765 Tobacco vein banding mosaic virus AF190123.1 3 20050415 107324 Tobacco vein clearing virus X04083.1 5 20050418 12228 Tobacco vein mottling virus JN989441.1 2 20120517 1162558 Tobacco yellow dwarf virus-A isolate TYDV-A_AU_2561_2010 JN989446.1 4 20121204 1162558 Tobacco yellow dwarf virus-A isolate TYDV-B_AU_3492M_2002 KC840043.1 1 20130721 1010616 Tomato blistering mosaic virus isolate SC50 AF038044.1 4 20001123 135757 Defective interfering RNA-5 of tomato bushy stunt virus M21958.1 4 20050417 12145 Tomato bushy stunt virus AJ249740.1 4 20050415 12145 Tomato bushy stunt virus (statice isolate) JN676150.1 3 20120903 1127768 Tomato Chino La Paz virus -SLP 4 AY090557.1 4 20050416 223339 Tomato chlorotic mottle virus-Crumple DNA-A AF490004.1 4 20050415 223338 Tomato chlorotic mottle virus-[Brazil] DNA-A AF491306.1 3 20030529 223338 Tomato chlorotic mottle virus-[Brazil] DNA-B AY090556.1 2 20040619 191461 Tomato crinkle yellow leaf virus DNA-B K02029.1 5 20030529 223341 Tomato golden mosaic virus-Yellow vein DNA-A K02030.1 3 20030310 223341 Tomato golden mosaic virus-Yellow vein DNA-B AF428255.1 4 20050415 220934 Tomato leaf curl Bangalore virus-[Kolar] EU280314.1 1 20071209 486898 Tomato leaf curl Bangalore virus-[Ban5] satellite DNA beta KF260965.1 1 20140515 1498504 Tomato leaf curl Barka virus isolate Tom-55 FR717142.1 2 20120216 743040 Tomato leaf curl Cameroon alphasatellite, isolate SatA8 HE659516.1 1 20130107 1141724 Tomato leaf curl Cameroon virus - Fontem isolate TFB17 EU487044.1 2 20110501 507474 Tomato leaf curl Cebu virus JF919829.1 1 20111018 278069 Tomato leaf curl China betasatellite isolate JX-2 AJ421619.2 3 20030227 278069 Tomato leaf curl China betasatellite isolate Y25 AJ506791.1 3 20030227 278069 Tomato leaf curl China betasatellite isolate Y36 AJ420313.1 3 20030227 278069 Tomato leaf curl China betasatellite isolate Y45 EU365687.1 1 20080122 493828 Tomato yellow leaf curl China virus satellite DNA beta-Dali198 JF681158.1 2 20110506 229636 Tomato leaf curl China virus isolate JX-2 EU487048.2 3 20110501 507475 Tomato leaf curl Cotabato virus AM236785.1 2 20070716 377609 Tomato leaf curl Guangxi virus, isolate GX-2 GQ994098.1 1 20110930 219299 Tomato leaf curl Gujarat virus isolate Ramgarh AY190290.1 6 20080221 269306 Tomato leaf curl Gujarat virus - [Varanasi] segment A AY190291.1 5 20080221 269306 Tomato leaf curl Gujarat virus - [Varanasi] segment B FN434083.1 2 20101118 664980 Tomato leaf curl Hainan virus FN256261.2 3 20101118 671275 Tomato leaf curl Hainan virus HaNHK7 HQ162270.1 1 20110203 971271 Tomato leaf curl Hanoi virus isolate Vietnam/Hanoi/tomato/2010 AB162142.1 2 20070525 263578 Tomato leaf curl Java virus-[Ageratum] satellite DNA AB162141.1 2 20070525 263577 Tomato leaf curl Java virus-[Ageratum] JX311468.1 1 20130922 309390 Tomato leaf curl Joydebpur virus AY754812.1 1 20061002 220932 Tomato leaf curl Karnataka virus FJ514798.1 4 20110922 611306 Tomato leaf curl Karnataka virus - Bangalore [India:Punjab:Mentha:2007] HF912280.1 2 20140403 1303385 Tomato leaf curl Liwa virus isolate LW1 AJ865338.1 5 20110318 996311 Tomato leaf curl Madagascar virus-Menabe [Madagascar:Morondova:2001], isolate Morondova AY502936.1 2 20080326 260379 Tomato leaf curl Mali virus EU487046.1 2 20110501 507476 Tomato leaf curl Mindanao virus FN600540.1 2 20110311 439421 Tomato leaf curl Namakely virus, isolate Comoros:Foubouni:Tobacco:2005 AJ865341.1 4 20110310 439421 Tomato leaf curl Namakely virus, isolate Mayote:Dembeni:2003 AM850115.1 2 20070912 223347 Tomato leaf curl New Delhi virus DNA-A FJ956700.1 2 20110309 713949 Tomato leaf curl Oman virus isolate Alb22 AM948961.1 3 20130620 341711 Tomato leaf curl Pakistan virus JF501726.1 1 20120305 526476 Tomato leaf curl Palampur virus isolate IR:Bar:B908P:bea:10 AB307732.1 3 20090118 447325 Tomato leaf curl Philippine betasatellite, isolate: Laguna1 EU487037.2 3 20110501 96054 Tomato leaf curl Philippines virus AY754814.1 2 20061020 407838 Tomato leaf curl Pune virus - [India:Pune:2005] GQ994095.1 1 20110124 938276 Tomato leaf curl Ranchi virus AM491778.1 1 20070210 425303 Tomato leaf curl Seychelles virus EF110891.1 1 20071202 270146 Tomato leaf curl Sudan virus GU180085.1 1 20091206 694582 Tomato leaf curl Sudan virus -[Wad Madani] U88692.1 5 20050418 196093 Tomato leaf curl Taiwan virus FN256292.1 1 20090313 624128 Tomato leaf curl Taiwan virus ZJWZ5 HE659517.1 1 20130107 1141723 Tomato leaf curl Togo virus - Fontem isolate TFB2 EU189149.1 1 20081101 208177 Tomato leaf curl Vietnam virus KF612317.1 1 20131204 28350 Tomato leaf curl virus strain SA1 U74627.1 4 20130227 1298467 Tomato leaf curl virus satellite DNA AF332868.1 2 20120404 12253 Tomato mosaic virus AJ243571.1 3 20120412 12253 Tomato mosaic virus (K1 strain) AJ417701.1 2 20050415 12253 Tomato mosaic virus strain camellia KF477193.1 2 20131022 1391702 Tomato mottle mosaic virus isolate MX5 AF012300.1 6 20050415 223358 Tomato mottle Taino virus DNA-A AF012301.1 5 20040619 223358 Tomato mottle Taino virus DNA-B L14460.1 7 20050417 223359 Tomato mottle virus-[Florida] DNA-A L14461.1 7 20040619 223359 Tomato mottle virus-[Florida] DNA-B JQ314463.1 3 20120530 1176153 Tomato necrotic stunt virus strain MX9354 L19655.1 4 20000304 12280 Tomato ringspot virus segment RNA-1 D12477.2 12 20071218 12280 Tomato ringspot virus segment RNA-2 AF291705.1 4 20060727 223360 Tomato rugose mosaic virus-[Ube] DNA-A AF291706.1 3 20060727 223360 Tomato rugose mosaic virus-[Ube] DNA-B JN680352.1 3 20120903 1086071 Tomato severe leaf curl virus - Huasteca JN676151.1 3 20120903 1127769 Tomato severe leaf curl virus - SLP 3 S48091.1 4 20040901 11613 Tomato spotted wilt virus segement M D00645.1 9 20071207 11613 Tomato spotted wilt virus segement S D10066.1 4 20071128 11613 Tomato spotted wilt virus segment L DQ388879.1 6 20091012 370833 Tomato torrado virus segment RNA1 DQ388880.1 6 20091012 370833 Tomato torrado virus segment RNA2 EU779803.2 2 20110930 544743 Tomato yellow blotch virus AY227892.1 1 20051130 232380 Tomato yellow leaf curl Axarquia virus isolate ES-mh800 AM050555.1 2 20061024 185793 Tomato yellow leaf curl China virus complete genome, isolate G102 AM261326.1 1 20060503 382677 Tomato yellow leaf curl China virus -[Y264] complete genome, isolate Y264 EU365686.1 1 20080122 493827 Tomato yellow leaf curl China virus-Dali198 AJ319674.1 4 20050415 221526 Tomato yellow leaf curl China virus-Tb[Y5] AJ420316.1 7 20050415 221530 Tomato yellow leaf curl China virus-Tb[Y36] AJ420317.1 6 20050415 221531 Tomato yellow leaf curl China virus-Tb[Y38] AJ457985.1 6 20050415 221532 Tomato yellow leaf curl China virus-To[Y25] isolate Y25 AJ781302.1 4 20041201 284541 Tomato yellow leaf curl China virus-[Y43] AJ457823.1 6 20050415 221525 Tomato yellow leaf curl China virus-[Y64] AM181683.1 2 20070501 366681 Tomato yellow leaf curl China virus-[Y322] isolate Y322 EF011559.1 1 20061029 408092 Tomato yellow leaf curl China virus-[YN72] JN859135.1 1 20121130 219744 Tomato yellow leaf curl Malaga virus isolate Portugal:Algarve 2:2001 AY502934.1 1 20040115 260377 Tomato yellow leaf curl Mali virus HE800541.1 3 20131010 1172353 Tomato yellow leaf curl Oman betasatellite beta C1 gene, isolate P-23 AY702650.1 1 20040904 123735 Tomato yellow leaf curl Sardinia virus strain Murcia DQ845787.1 1 20060825 398296 Tomato yellow leaf curl Sardinia virus-Israel KF040453.1 1 20130901 1391746 Tomato yellow leaf curl Saudi virus isolate Hail1 X63015.1 4 20150307 221541 Tomato yellow leaf curl Thailand virus-[1] DNA A X63016.1 6 20150307 221541 Tomato yellow leaf curl Thailand virus-[1] DNA B AF141922.1 7 20070410 221540 Tomato yellow leaf curl Thailand virus-[2] component A AF141897.1 6 20070410 221540 Tomato yellow leaf curl Thailand virus-[2] component B EU189146.1 2 20080719 478085 Tomato leaf curl Vietnam virus satellite DNA beta DX2 EU189147.1 2 20080719 478086 Tomato leaf curl Vietnam virus satellite DNA beta VR2 EU189148.1 2 20080719 478087 Tomato leaf curl Vietnam virus satellite DNA beta VRQ EU189150.1 1 20081101 390442 Tomato yellow leaf curl Vietnam virus EU635776.1 2 20090323 10832 Tomato yellow leaf curl virus JN680353.1 3 20120903 1086072 Tomato yellow leaf curl virus - Huasteca AB110218.1 1 20031114 66366 Tomato yellow leaf curl virus - Il - Israel strain Sz JF451352.1 1 20110517 1031438 Tomato yellow leaf curl virus - KISR AJ865337.2 4 20070820 220944 Tomato yellow leaf curl virus - Mild isolate Reunion AB921568.1 1 20140408 1484007 Tomato yellow leaf curl virus - Mild [Japan:Takatsuki] AF105975.1 6 20050415 270153 Tomato yellow leaf curl virus - Mild[Portugal] AB439842.1 2 20090925 537882 Tomato yellow leaf curl virus - Mild[Tokai] FN256259.1 1 20090313 623708 Tomato yellow leaf curl virus JSNJ1 FN256257.1 1 20090313 623706 Tomato yellow leaf curl virus SDJN2 FN256258.1 1 20090313 623707 Tomato yellow leaf curl virus SH3 FN252890.1 1 20090312 623233 Tomato yellow leaf curl virus ZJHZ1 FN256256.1 1 20090313 623705 Tomato yellow leaf curl virus ZJHZ12 JQ303121.1 3 20120903 1166472 Tomato yellow leaf curl virus-IL [MX: SLP:11] AB192966.1 5 20100603 503397 Tomato yellow leaf curl virus-Israel [Japan:Haruno:2005] AB192965.1 5 20100603 503396 Tomato yellow leaf curl virus-Israel [Japan:Tosa:2005] KF229722.1 1 20140403 1481463 Tomato yellow leaf curl virus-Oman isolate Tom-36 AJ223505.1 3 20050415 220940 Tomato yellow leaf curl virus-[Cuba] GU076454.1 1 20101216 761705 Tomato yellow leaf curl virus-[Genaveh:Iran] isolate TYLCV-Bou[IR:Ge29:06] GU076452.1 1 20101216 761706 Tomato yellow leaf curl virus-[Jiroft:Iran] isolate TYLCV-OM[IR:Ji42:06] GU076449.1 1 20101216 761707 Tomato yellow leaf curl virus-[Kahnooj:Iran] isolate TYLCV-Ker[IR:Ka21:06] GU076443.1 1 20101216 761708 Tomato yellow leaf curl virus-[Minab:Iran] isolate TYLCV-Ker[IR:Ho33:06] GU076445.1 1 20101216 761709 Tomato yellow leaf curl virus-[Orzuiyeh:Iran] isolate TYLCV-IL[IR:Or28:07] GU076451.1 1 20101216 761710 Tomato yellow leaf curl virus-[Roodan:Iran] isolate TYLCV-OM[IR:Ro25:06] GU076447.1 1 20101216 761711 Tomato yellow leaf curl virus-[Shiraz:Iran] isolate TYLCV-IL[IR:Sh47:07] GU076440.1 1 20101216 761712 Tomato yellow leaf curl virus-[Taft:Iran] isolate TYLCV-IL[IR:Ta30:06] AB439841.1 2 20090925 537881 Tomato yellow leaf curl virus-[Tochigi] EF552435.1 3 20080422 460926 Tomato zonate spot virus segment L EF552434.1 3 20080422 460926 Tomato zonate spot virus segment M EF552433.1 2 20080422 460926 Tomato zonate spot virus segment S HM855265.1 1 20110731 687385 UNVERIFIED: Torque teno canis virus, isolate Sh-TTV203 HM142588.1 1 20110320 687384 Torque teno felis virus isolate SH-F1 AB290919.1 5 20091102 687380 Torque teno midi virus 2 AB026929.1 4 20091102 687374 Torque teno mini virus 6 GU188045.1 3 20101119 687386 Torque teno sus virus 1a isolate 471819 GU570199.1 3 20110309 687386 Torque teno sus virus 1a isolate TTV1_20N KF660540.1 3 20140102 687387 Torque teno sus virus 1b isolate TTSuV2_ZJ GU570197.1 3 20110309 687387 Torque teno sus virus 1b isolate TTV2_GE9 JQ406846.1 2 20121122 1239832 Torque teno sus virus k2b isolate 38E23 GU450331.1 1 20100407 742012 Torque teno sus virus SH0822/2008 KM434181.1 1 20140918 1543419 Torque teno Tadarida brasiliensis virus JN704611.1 2 20120205 1128423 Pine marten torque teno virus 1 isolate VS4700004 FR751502.1 2 20110707 68887 Torque teno virus, isolate TTV-HD23c (rheu211) AM712003.1 2 20080219 444002 TT virus sle1931 AM712004.1 2 20080219 444003 TT virus sle1932 AM711976.1 2 20080219 443975 TT virus sle1957 AM712030.1 2 20080219 444029 TT virus sle2057 AM712031.1 2 20080219 444030 TT virus sle2058 AM712033.1 2 20080219 444032 TT virus sle2061 AM712034.1 2 20080219 444033 TT virus sle2065 AM712032.1 2 20080219 444031 TT virus sle2072 AY666122.2 6 20091031 687342 Torque teno virus 3 AB025946.2 5 20091104 687358 Torque teno virus 19 FJ459582.1 2 20090415 1218490 Torque teno zalophus virus 1 KM873614.1 1 20141209 1578826 Tortoise picornavirus strain 144-10 KJ415177.1 1 20140409 1483681 Tortoise Rafivirus A isolate UF4 KP266743.1 2 20150320 1585660 Tortoise ranavirus isolate 1 (882/96) AF258784.1 4 20050415 47680 Tree shrew adenovirus 1 KP768176.1 1 20150421 1631732 Trematomus polyomavirus 1 isolate PES6 JN709473.1 1 20120213 1144379 Trichechus manatus latirostris papillomavirus 2 strain M09-20 GU989205.1 1 20100729 862909 Trichodysplasia spinulosa-associated polyomavirus HQ607513.1 1 20110508 674953 Trichomonas vaginalis virus 1 strain TVV1-UR1 HQ607524.1 1 20110508 674954 Trichomonas vaginalis virus 2 strain TVV2-OC5 HQ607515.1 1 20110508 170965 Trichomonas vaginalis virus 3 strain TVV3-UR1 HQ607520.1 1 20110508 1008292 Trichomonas vaginalis virus 4 strain TVV4-OC3 DQ517337.1 1 20061004 328615 Trichoplusia ni ascovirus 2c DQ017380.1 2 20050812 332054 Trichoplusia ni single nucleopolyhedrovirus KP005453.1 1 20150113 1590173 Trifolium-associated circular DNA virus 1 isolate TasCV-1_FR34-34-Cam FJ263671.1 2 20090922 431317 Triticum mosaic virus isolate U06-123 AB038625.1 2 20000920 93678 TTV-like mini virus isolate TLMV-CLC062 HQ380014.1 2 20110304 941765 Tuber aestivum endornavirus isolate Jaszag from Hungary HQ992989.1 1 20110606 1037523 Tuber aestivum mitovirus GU128080.1 2 20100625 798072 Tuhoko virus 1 GU128081.1 2 20100625 798073 Tuhoko virus 2 GU128082.1 2 20100625 798074 Tuhoko virus 3 AJ005637.1 2 20030425 37133 Tula virus segement L Z69991.1 28 20030326 37133 Tula virus segement S Z69993.1 29 20030326 37133 Tula virus segment M KF483846.1 2 20140924 1421067 Tunisvirus fontaine2 strain U484 AF079780.2 5 20050812 92129 Tupaia paramyxovirus AY840978.1 4 20061114 318558 Tupaia virus AF281817.1 3 20050415 10397 Tupaiid herpesvirus 1 GQ273492.1 1 20100721 273651 Turbot reddish body iridovirus KF477312.1 3 20140102 1408257 Turkey adenovirus 4 isolate TNI1 KF477313.1 2 20140102 1408258 Turkey adenovirus 5 isolate 1277BT EU143844.1 2 20121005 70793 Turkey astrovirus GU936707.2 3 20111225 878329 Turkey adenovirus 1 KF961188.1 1 20140326 1477516 Turkey megrivirus strain turkey/B407-THV/2011/HUN KM598419.1 1 20150402 1633570 Meleagris gallopavo enteric parvovirus isolate TuPV 1085 GU214705.1 1 20100308 740933 Turkey parvovirus 1078 AY849321.1 3 20090722 318490 Avirulent turkey hemorrhagic enteritis virus AF074946.1 2 20050415 41678 Turkey adenovirus 3 GU456686.1 1 20100706 859650 Turnip curly top virus AF169561.2 4 20050415 12230 Turnip mosaic virus AF394601.1 2 20050415 12230 Turnip mosaic virus strain C1 AF394602.1 2 20050415 12230 Turnip mosaic virus strain TW AB194796.1 3 20050128 300942 Turnip mosaic virus (isolate UK1) KC778721.1 2 20131216 218923 Turnip rosette virus isolate TRoV-2 DQ658743.1 3 20120404 29272 Turnip vein-clearing virus U03387.1 12 20121002 29272 Turnip vein-clearing virus, strain OSU X16378.1 4 19990215 12154 Turnip yellow mosaic virus JQ862472.1 1 20121212 131083 Turnip yellows virus isolate WA-1 EU734831.1 3 20101109 604276 TYLCAxV-Sic1-[IT:Sic2/2:04] EF065505.1 1 20070210 424359 Bat coronavirus HKU4-1 EF065506.1 1 20070210 424360 Bat coronavirus HKU4-2 EF065507.1 1 20070210 424361 Bat coronavirus HKU4-3 EF065508.1 1 20070210 424362 Bat coronavirus HKU4-4 HM181930.1 5 20121116 946046 Ugandan cassava brown streak virus FJ039520.1 3 20121116 946046 Ugandan cassava brown streak virus isolate MLB3 JX904413.1 2 20131115 186617 Uncultured marine virus clone SI00095 M14363.1 8 20061114 10784 Bovine parvovirus DQ335247.1 2 20071029 365609 Bovine parvovirus-1 strain Abinanti HM053693.1 2 20101109 795694 Porcine bocavirus 1 pig/ZJD/China/2006 HM053694.1 2 20101109 795695 Porcine bocavirus 2 pig/ZJD/China/2006 JF429834.1 1 20110919 1084715 Porcine bocavirus 3 strain SH20F JN681175.1 1 20120813 1138844 Porcine bocavirus 3C isolate pig/ZJD/China/2006 JF429835.1 1 20110919 1084717 Porcine bocavirus 4-1 strain SH17N-1 JF429836.1 1 20110919 1084718 Porcine bocavirus 4-2 strain SH17N-2 GU978965.1 4 20101201 707546 Porcine parvovirus 4 U44978.1 4 20050417 10796 Porcine parvovirus GU117620.1 1 20110403 706524 Delphinus delphis papillomavirus GU117624.1 1 20110403 706530 Lagenorhynchus acutus papillomavirus EU240894.1 1 20080731 936059 Tursiops truncatus papillomavirus 1 JN709469.1 2 20120325 1144380 Tursiops truncatus papillomavirus 4 strain Tt08-09-4 JN709472.1 2 20120325 1144383 Tursiops truncatus papillomavirus 7 strain Tt09-43 EU240895.1 1 20080731 496865 Tursiops truncatus papillomavirus type 3 M10455.1 4 20051101 354090 UR2 sarcoma virus EU445695.1 1 20080601 520848 Urochloa streak virus KC433710.1 2 20141105 1312445 Ustilaginoidea virens RNA virus 1 KF791042.1 4 20140604 1460374 Ustilaginoidea virens RNA virus 3 KJ101566.1 2 20150213 1561171 Ustilaginoidea virens RNA virus L isolate GX-1 KJ101567.1 1 20141021 1561172 Ustilaginoidea virens RNA virus M isolate GX-1 AY453412.1 1 20041005 64286 Usutu virus strain SAAR-1776 D10759.1 6 20071218 11591 Uukuniemi virus segment L M17417.1 6 20110605 11591 Uukuniemi virus segment M M33551.1 4 20000304 11591 Uukuniemi virus segment S DQ792504.1 1 20060901 397342 Horsepox virus isolate MNR-76 AY484669.1 3 20051022 32606 Rabbitpox virus U94848.1 3 20050418 10245 Vaccinia virus Ankara, highly attenuated AM501482.1 2 20090130 126794 Vaccinia virus Ankara M35027.1 11 20060316 10249 Vaccinia virus Copenhagen EU410304.1 2 20091001 502057 Vaccinia virus GLV-1h68 JQ723475.1 2 20120805 1188990 Vallota speciosa virus isolate Marijiniup 7 AB690372.1 2 20120510 1129873 Valsa ceratosperma hypovirus 1 RNA, strain: MVC86 L22579.1 9 20050417 12870 Variola major virus strain Bangladesh-1975 X69198.1 29 20050418 10255 Variola virus X72086.1 5 20050418 10255 Variola virus strain Garcia-1966 FN543425.1 3 20150307 667119 Velvet bean severe mosaic virus DNA A FN543426.1 3 20150307 667119 Velvet bean severe mosaic virus DNA B HM754263.2 5 20120424 12473 Velvet tobacco mottle virus strain K1 L04653.1 8 20050417 11036 Venezuelan equine encephalitis virus strain P676 L01443.1 7 20061114 11036 Venezuelan equine encephalitis virus strain TC-83 AF100566.1 4 20050415 11036 Venezuelan equine encephalitis virus strain ZPC738 EU564817.1 2 20100814 515446 Verbena virus Y isolate Michigan FN435836.1 2 20100628 666635 Vernonia yellow vein betasatellite AB767298.1 3 20130524 1286216 Vervet monkey polyomavirus 1 isolate VMS96 AB767299.2 3 20130524 1286217 Vervet monkey polyomavirus 2 isolate VMK96 JX047864.1 1 20121212 1266463 Reptile vesivirus Cro1 isolate 780032I/1978/US U15301.2 6 20050417 11982 San Miguel sea lion virus U76874.2 5 20050418 35612 Vesicular exanthema of swine virus AF091736.1 3 20050415 82664 VESV-like calicivirus EU373658.1 1 20080612 198833 Vesicular stomatitis Alagoas virus J02428.1 10 20050417 11277 Vesicular stomatitis Indiana virus JX121106.1 1 20120801 11280 Vesicular stomatitis New Jersey virus isolate NJ92CRB KC905171.1 1 20130807 11276 Vesicular stomatitis virus strain NJ2075212NM KC685626.1 5 20140515 1313165 Paralichthys olivaceus rhabdovirus Z93414.2 4 20000920 11287 Viral hemorrhagic septicemia virus strain Cod Ulcus Y18263.1 2 20120220 1147160 Viral hemorrhagic septicemia virus Fil3 M10608.1 10 20060803 11741 Visna/Maedi virus strain Icelandic 1514 L06906.1 11 20070910 11741 Visna/Maedi virus strain KV1772 KF857586.1 1 20141216 1163709 Vulpes vulpes papillomavirus 1 isolate ILAT 93957 KJ432572.1 1 20141125 1569258 Walkabout Creek virus isolate CS1056 KF042857.1 1 20140204 1457165 Wallerfield virus strain TR7904 AF033822.1 4 20050415 39720 Walleye dermal sarcoma virus AB017503.1 5 20120410 1169032 Wasabi mottle virus, isolate Shizuoka FJ694963.1 1 20090310 76052 Watermelon bud necrosis virus AY437609.1 2 20040814 146500 Watermelon mosaic virus strain WMV-Fr AF133128.1 2 20120330 43141 Watermelon silver mottle virus segement L U75379.1 2 20000304 43141 Watermelon silver mottle virus segment M U78734.1 3 20000603 43141 Watermelon silver mottle virus segment S EU707555.1 2 20091031 164416 Wesselsbron virus EF614258.1 2 20080719 249584 West Caucasian bat virus M12294.2 7 20050417 11082 West Nile virus AY490240.2 3 20050416 11082 West Nile Virus Chin strain AF481864.1 3 20050415 11082 West Nile virus strain IS-98 STD AF196835.2 4 20050415 11082 West Nile virus strain NY99-flamingo382-99 EF429200.1 1 20080301 449280 West Nile virus H442 EF429198.1 1 20080301 449277 West Nile virus SA93/01 EF429199.1 1 20080301 449279 West Nile virus SA381/00 EF429197.1 1 20080301 449278 West Nile virus SPU116/89 AY842931.3 4 20051019 307044 West Nile virus strain 385-99 AM404308.1 2 20080328 406269 West Nile virus strain PTRoxo GQ287644.1 1 20090728 11039 Western equine encephalitis virus isolate BFS-2005 HM147993.1 1 20120227 48543 Whataroa virus JQ361910.1 3 20121017 1174526 Wheat dwarf India virus JF781306.2 3 20141105 1174526 Wheat dwarf India virus clone IN:Wel:WO1 AM922264.1 1 20081214 497862 Barley dwarf virus defective form AM980882.1 3 20130404 10834 Wheat dwarf virus - Barley/SxA43-7 AM040733.1 1 20050628 10834 Wheat dwarf virus complete genome, isolate WDV-F AM040732.1 1 20050628 10834 Wheat dwarf virus, isolate WDV-B AM980883.1 1 20080501 520123 Wheat dwarf virus - Barley/SxA43-16 AJ311031.1 5 20061114 290587 Wheat dwarf virus - [Enkoping1] EF536859.1 2 20090130 452663 Wheat dwarf virus - [Gansu Gangu] isolate GSGG05-1 EF536868.1 2 20090130 452664 Wheat dwarf virus - [Hebei Shijiazhuang] isolate HBSJZ06-9 EF536861.1 2 20090130 452665 Wheat dwarf virus - [Henan zhengzhou] isolate HNZZ05 EF536873.1 2 20090130 452666 Wheat dwarf virus - [Sanxi Taiyuan] isolate SXTY05-2 EF536878.1 2 20090130 452667 Wheat dwarf virus - [Sanxi Yangling] isolate SXYL05-2 EF536876.1 2 20090130 452668 Wheat dwarf virus - [Sanxi Yuncheng] isolate SXYC05-3 X02869.1 13 20081023 268789 Wheat dwarf virus - [Sweden] DQ868525.1 2 20061222 399784 Wheat dwarf virus - [Taiyuan] EF536886.1 2 20090130 452669 Wheat dwarf virus - [Yunnan Kunming] isolate YNKM06-2 AM989927.1 1 20080507 522359 Wheat dwarf virus Bg17 FM210034.1 2 20080913 558674 Wheat dwarf virus H07 AF057533.1 3 20051123 31741 Wheat streak mosaic virus FM865413.1 2 20110217 572239 Wheat yellow dwarf virus-GPV D86634.1 5 20050422 75746 Wheat yellow mosaic virus RNA1 D86635.1 5 20050422 75746 Wheat yellow mosaic virus RNA2 DQ898157.1 2 20061115 405554 White bream virus strain DF24/00 X06728.1 6 19930912 12188 White clover mosaic virus AF332093.3 4 20141116 92652 Shrimp white spot syndrome virus AF440570.1 3 20050415 92652 Shrimp white spot syndrome virus, isolate Taiwan AF369029.2 4 20050426 92652 Shrimp white spot syndrome virus, isolate WSSV-TH JX515788.1 1 20121121 342409 White spot syndrome virus strain K-LV1 JQ065044.1 1 20120320 1159907 White-eye coronavirus HKU16 strain HKU16-6847 HM859902.1 1 20110522 1032481 Whitefly VEM 1 begomovirus HM859903.1 1 20110522 1032482 Whitefly VEM 2 begomovirus HM859908.1 1 20110522 1032483 Whitefly VEM satellite isolate a HM859906.1 1 20110522 1032483 Whitefly VEM satellite isolate b HM859907.1 1 20110522 1032483 Whitefly VEM satellite isolate c HM859905.1 1 20110522 1032483 Whitefly VEM satellite isolate d HM859904.1 1 20110522 1032483 Whitefly VEM satellite isolate e HM859911.1 1 20110522 1032483 Whitefly VEM satellite isolate f HM859910.1 1 20110522 1032483 Whitefly VEM satellite isolate g HM859909.1 1 20110522 1032483 Whitefly VEM satellite isolate h AY924395.1 1 20071202 46919 Whitewater Arroyo virus segment L AF228063.1 3 20080815 46919 Whitewater Arroyo virus segment S JQ065048.1 1 20120320 1159908 Wigeon coronavirus HKU20 strain HKU20-9243 DQ851495.1 2 20080306 400396 Wild tomato mosaic virus isolate Laichau AY656816.1 2 20061025 201862 Wisteria vein mosaic virus isolate Beijing EF612701.1 2 20080604 318854 Wongabel virus M11082.1 5 20000304 35269 Woodchuck hepatitis virus AF046996.1 2 20000303 68416 Woolly monkey hepatitis B Virus EF444553.1 2 20070619 440266 WU Polyomavirus strain S4 AF162221.1 2 20050415 51677 Xestia c-nigrum granulovirus KJ636781.1 3 20140625 1272959 Xiburema virus isolate XIBV/BE AR 362159 EU360723.1 1 20080311 508418 Bovine papillomavirus BAA5-Japan X05817.1 15 19980418 10562 Bovine papillomavirus type 4 AJ620208.1 2 20050415 10563 Bovine papillomavirus type 6 AB331650.1 1 20071222 453460 Bovine papillomavirus type 9 AB331651.1 1 20071222 453461 Bovine papillomavirus type 10 AB543507.1 3 20130627 714200 Bovine papillomavirus type 11 AJ620207.1 2 20050415 10561 Xipapillomavirus 1 JF834523.1 3 20120224 1070324 Bos taurus papillomavirus 12 isolate PR000001 V01170.1 7 20060523 11884 Y73 sarcoma virus AY386371.1 3 20050416 38804 Yaba monkey tumor virus KM229702.1 1 20150213 1561150 Yacon necrotic mottle virus isolate YV1 JN190431.1 3 20120405 1115539 Yam bean mosaic virus isolate SR KJ789130.1 1 20150115 1592930 Yam latent virus isolate SG1 JX470965.1 2 20130129 87097 Yam mild mosaic virus from Brazil U42596.1 4 20050418 41460 Yam mosaic virus KF482072.1 4 20140515 1421055 Yam spherical virus DSM:PV-0517 KJ711908.1 1 20141014 1503864 Yam virus X isolate T551 KM085030.1 1 20141012 1272960 Yata virus isolate DakArB 2181 KJ577598.1 1 20150303 1608532 Anubis baboon polyomavirus isolate K922AD-LPCZ1 AB767295.2 3 20130524 1286214 Yellow baboon polyomavirus 2 isolate BS94/BK94 X03700.1 5 20040428 11089 Yellow fever virus FJ654700.1 1 20090304 617102 Yellow fever virus 17D/Tiantan KF984546.1 2 20140828 655837 Yellow oat-grass mosaic virus isolate YOgMV-Sb KF495565.1 4 20140515 1416026 Yellow tailflower mild mottle virus isolate Nb KJ634409.1 3 20141004 1514896 Yerba mate endornavirus strain INTA HQ849551.1 2 20110904 1076255 Yoka poxvirus strain DakArB 4268 AB261175.1 3 20090202 228578 Youcai mosaic virus genomic RNA, complete genome, isolate: 722 AF254924.1 4 20120404 228578 Youcai mosaic virus, isolate Shanghai EU571218.1 2 20120404 228578 Youcai mosaic virus, isolate Wh JF911700.1 2 20130407 1173703 Yug Bogdanovac virus AF086833.2 9 20120214 128952 Ebola virus - Mayinga, Zaire, 1976 JQ352763.1 2 20130128 186538 Zaire ebolavirus strain Mayinga JQ692088.1 1 20121009 204478 Iranian johnsongrass mosaic virus isolate Shz KP793918.1 1 20150422 1642515 Zebra finch circovirus isolate 8454V25-1 AF498323.1 3 20050415 333920 Equus caballus papillomavirus 1 LC002520.1 1 20140912 64320 Zika virus genomic RNA strain: MR766-NIID KC345605.1 2 20140227 1406816 Zucchini tigre mosaic virus isolate Q10 AF127929.2 3 20050415 12232 Zucchini yellow mosaic virus JF930326.1 1 20140702 253701 Zygocactus virus X isolate P39