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Genomes Pages - Viroid

58 organisms.

Accession numbers of all the entries listed below may be downloaded as a text file for use in downloading using the Sequence Version Archive.

A more-detailed, tab-delimited list is also available.


   Description Length (bp) Sequence Project Proteins
Plain HTML
species Apple dimple fruit viroid 
1a Apple dimple fruit viroid 306 X99487 X99487   n/a
1b Apple dimple fruit viroid isolate SDYT-1 306 KC237731 KC237731   n/a
species Apple fruit crinkle viroid 
2a Apple fruit crinkle viroid genomic RNA 373 AB366019 AB366019   n/a
2b Apple fruit crinkle viroid genomic RNA isolate: vir7 371 AB795270 AB795270   n/a
species Apple scar skin viroid 
3a Apple scar skin viroid 329 X17696 X17696   n/a
3b Apple scar skin viroid clone ASSVd-ap 330 HQ840722 HQ840722   n/a
3c Apple scar skin viroid clone ASSVd-Z7 327 JX861259 JX861259   n/a
3d Apple scar skin viroid clone Chardonnay I10V1 205 JX860405 JX860405   n/a
3e Apple scar skin viroid isolate AY10ch12 331 HQ326096 HQ326096   n/a
3f Apple scar skin viroid strain Y8 330 KC110860 KC110860   n/a
3g Apple scar skin viroid, isolate Hatkoti 330 FR749995 FR749995   n/a
4 Dapple apple viroid 331 X71599 X71599   n/a
species Australian grapevine viroid 
5a Australian grapevine viroid 369 DQ362908 DQ362908   n/a
5b Australian grapevine viroid isolate AG-SB-3.2 370 KJ489017 KJ489017   n/a
5c Australian grapevine viroid isolate AGVd-Bm10#2 369 JQ686701 JQ686701   n/a
5d Australian grapevine viroid isolate Kheljan 369 JN008865 JN008865   n/a
5e Australian grapevine viroid isolate shahreza 369 KF876036 KF876036   n/a
species Avocado sunblotch viroid 
6a Avocado sunblotch viroid 247 X13000 X13000   n/a
6b Avocado sunblotch viroid isolate Uruapan-1 249 KF562705 KF562705   n/a
species Cherry small circular viroid-like RNA 
7 Cherry small circular viroid-like RNA 1 isolate cscRNA1.84 415 DQ357615 DQ357615   n/a
8 Cherry small circular viroid-like RNA 2 isolate cscRNA2.82 376 DQ357622 DQ357622   n/a
species Chrysanthemum chlorotic mottle viroid 
9a Chrysanthemum chlorotic mottle viroid 399 Y14700 Y14700   n/a
9b Chrysanthemum chlorotic mottle viroid isolate H5-2 399 HQ891016 HQ891016   n/a
species Chrysanthemum stunt viroid 
10a Chrysanthemum stunt viroid 354 AJ000046 AJ000046   n/a
10b Chrysanthemum stunt viroid genomic RNA, isolate: P4-16 354 AB689031 AB689031   n/a
10c Chrysanthemum stunt viroid genomic RNA, strain: SK1 354 AB679193 AB679193   n/a
10d Chrysanthemum stunt viroid isolate 2214-BR 354 JX909290 JX909290   n/a
10e Chrysanthemum stunt viroid isolate AF164 355 JF938538 JF938538   n/a
10f Chrysanthemum stunt viroid isolate CSVd 37 354 JF414238 JF414238   n/a
10g Chrysanthemum stunt viroid isolate H5-2 354 HQ891019 HQ891019   n/a
10h Chrysanthemum stunt viroid isolate US1.8 354 JQ809263 JQ809263   n/a
10i Chrysanthemum stunt viroid isolate YC201110 354 KC345440 KC345440   n/a
species Citrus bark cracking viroid 
11a Citrus bark cracking viroid 284 X14638 X14638   n/a
11b Citrus bark cracking viroid isolate Westin 284 JN903766 JN903766   n/a
species Citrus bent leaf viroid 
12a Citrus bent leaf viroid 315 U21125 U21125   n/a
12b Citrus bent leaf viroid clone Hb-C1-2 328 JF742600 JF742600   n/a
12c Citrus bent leaf viroid isolate CBLVd-2 230 JQ080280 JQ080280   n/a
13 Citrus viroid Ia 326 AF040721 AF040721   n/a
species Citrus dwarfing viroid 
14a Citrus dwarfing viroid 291 JF521494 JF521494   n/a
14b Citrus dwarfing viroid clone Hb-C1-2 295 JF742602 JF742602   n/a
14c Citrus dwarfing viroid III, isolate 054-4uy 294 AY514448 AY514448   n/a
14d Citrus dwarfing viroid isolate H16-9 294 JF970265 JF970265   n/a
14e Citrus dwarfing viroid isolate LS-4 293 JF812069 JF812069   n/a
15 Citrus viroid IIIb 296 AF184148 AF184148   n/a
16 Citrus viroid IIIc 291 AF184149 AF184149   n/a
species Citrus exocortis viroid 
17a Citrus exocortis viroid 370 AJ490825 AJ490825   n/a
17b Citrus exocortis viroid clone BO-D2E 372 KJ810543 KJ810543   n/a
17c Citrus exocortis viroid isolate 159-1 371 KF973205 KF973205   n/a
17d Citrus exocortis viroid isolate ca6 374 HQ452417 HQ452417   n/a
17e Citrus exocortis viroid isolate CEVd.016 371 HQ284026 HQ284026   n/a
17f Citrus exocortis viroid isolate Exo100-12 373 JX237458 JX237458   n/a
17g Citrus exocortis viroid isolate Sj-Slo 373 HQ423166 HQ423166   n/a
17h Citrus exocortis viroid isolate sr1 370 HQ667138 HQ667138   n/a
17i Citrus exocortis viroid strain 4-25 372 KC282381 KC282381   n/a
17j Citrus exocortis viroid strain CBO-D 371 KC290927 KC290927   n/a
18 Citrus exocortis viroid (CEV-g) 369 Y00328 Y00328   n/a
19 Citrus exocortis viroid Sj 1 372 AM774356 AM774356   n/a
20 Citrus exocortis viroid Sj 2 374 AM774357 AM774357   n/a
21 Citrus exocortis Yucatan viroid 394 FJ751925 FJ751925   n/a
species Citrus viroid V 
22a Citrus viroid V 294 EF617306 EF617306   n/a
22b Citrus viroid V from Citrus limon 293 JQ072089 JQ072089   n/a
22c Citrus viroid V isolate JK1 294 JQ348932 JQ348932   n/a
22d Citrus viroid V isolate WN4R 294 KC460712 KC460712   n/a
species Citrus viroid VI 
23 Citrus viroid VI 328 AB366016 AB366016   n/a
species Coconut cadang-cadang viroid 
24a Coconut cadang-cadang viroid isolate GOS Palm 246 HQ608513 HQ608513   n/a
24b Coconut cadang-cadang viroid isolate oil palm variant 270 270 DQ097185 DQ097185   n/a
24c Coconut cadang-cadang viroid RNA 1 fast 246 J02050 J02050   n/a
24d Coconut cadang-cadang viroid RNA 1 slow 287 J02051 J02051   n/a
species Coconut tinangaja viroid 
25 Coconut tinangaja viroid 254 M20731 M20731   n/a
species Coleus blumei viroid 1 
26a Coleus blumei viroid 1 isolate BJ-1-1 249 KC581915 KC581915   n/a
26b Coleus blumei viroid 1 RNA, isolate: Ind-1 249 AB740017 AB740017   n/a
26c Coleus blumei viroid 1 248 X52960 X52960   n/a
species Coleus blumei viroid 2 
27 Coleus blumei viroid 2 isolate CbVd-2-5 301 HQ727545 HQ727545   n/a
species Coleus blumei viroid 3 
28 Coleus blumei viroid 3 clone 3-2 362 HQ727548 HQ727548   n/a
species Coleus blumei viroid 5 
29 Coleus blumei viroid 5 274 FJ151370 FJ151370   n/a
species Coleus blumei viroid 6 
30a Coleus blumei viroid 6 343 FJ615419 FJ615419   n/a
30b Coleus blumei viroid 6 isolate BJ-6-1 340 KC581916 KC581916   n/a
species Columnea latent viroid 
31a Columnea latent viroid 370 X15663 X15663   n/a
31b Columnea latent viroid clone 1-6 374 JQ362419 JQ362419   n/a
31c Columnea latent viroid clone Prayong-13 366 KC143293 KC143293   n/a
31d Columnea latent viroid clone Rutgers 9 368 JF742636 JF742636   n/a
31e Columnea latent viroid isolate LP2-7c1 369 JF446924 JF446924   n/a
31f Columnea latent viroid, isolate CLVd-IT 370 HG916813 HG916813   n/a
species Eggplant latent viroid 
32 Eggplant latent viroid 335 AJ536612 AJ536612   n/a
species Grapevine yellow speckle viroid 1 
33a Grapevine yellow speckle viroid 1 clone 2 368 JF746171 JF746171   n/a
33b Grapevine yellow speckle viroid 1 clone 33 symptomatic 220 JX892934 JX892934   n/a
33c Grapevine yellow speckle viroid 1 clone IUT 14 367 KF916043 KF916043   n/a
33d Grapevine yellow speckle viroid 1 genomic RNA, isolate: Kar-1 366 AB742222 AB742222   n/a
33e Grapevine yellow speckle viroid 1 isolate 09-2009-2140g1 368 HQ447058 HQ447058   n/a
33f Grapevine yellow speckle viroid 1 isolate Amh1#11 368 JQ686708 JQ686708   n/a
33g Grapevine yellow speckle viroid 1 isolate GYSVd-1-WA-2 366 KC427100 KC427100   n/a
33h Grapevine yellow speckle viroid 1 isolate Mahabad 368 JN008866 JN008866   n/a
33i Grapevine yellow speckle viroid 1 isolate OR1b 368 KF137563 KF137563   n/a
33j Grapevine yellow speckle viroid 1 368 Z17225 Z17225   n/a
species Grapevine yellow speckle viroid 2 
34a Grapevine yellow speckle viroid 2 363 FJ597920 FJ597920   n/a
34b Grapevine yellow speckle viroid 2 clone IUT 10 361 KF916048 KF916048   n/a
34c Grapevine yellow speckle viroid 2 isolate GY2-RG-2.3 363 KJ489023 KJ489023   n/a
34d Grapevine yellow speckle viroid 2 isolate GYSVd-2-CF7#1 360 JQ686717 JQ686717   n/a
34e Grapevine yellow speckle viroid 2 isolate Maragheh 363 JN008867 JN008867   n/a
species Hop stunt viroid 
35 Citrus gummy bark viroid 299 FJ984562 FJ984562   n/a
36 Dapple peach fruit disease viroid 297 D13765 D13765   n/a
37 Dapple plum and peach fruit disease viroid 297 D13764 D13764   n/a
38 Grapevine viroid grapevine isolate 296 M35717 M35717   n/a
39a Hop stunt viroid 305 JQ080272 JQ080272   n/a
39b Hop stunt viroid clone 2 303 KF060660 KF060660   n/a
39c Hop stunt viroid clone 11R-HSVd 295 HQ386725 HQ386725   n/a
39d Hop stunt viroid clone B1B 297 Y09345 Y09345   n/a
39e Hop stunt viroid clone GH 302 KJ810552 KJ810552   n/a
39f Hop stunt viroid clone IUT 21 297 KF916039 KF916039   n/a
39g Hop stunt viroid clone Jx-C1-1 296 JF742601 JF742601   n/a
39h Hop stunt viroid clone RP8-2.2.2 299 KC137256 KC137256   n/a
39i Hop stunt viroid genomic RNA, isolate: Ind-1 298 AB742224 AB742224   n/a
39j Hop stunt viroid isolate 6-1 302 KJ139987 KJ139987   n/a
39k Hop stunt viroid isolate 09-2009-2140hs 297 HQ447057 HQ447057   n/a
39l Hop stunt viroid isolate 599 277 JX401927 JX401927   n/a
39m Hop stunt viroid isolate Cache100-6 301 JX237456 JX237456   n/a
39n Hop stunt viroid isolate DP2 dapple 297 JQ706343 JQ706343   n/a
39o Hop stunt viroid isolate F1 302 KF712280 KF712280   n/a
39p Hop stunt viroid isolate HL3 296 JX430799 JX430799   n/a
39q Hop stunt viroid isolate HSVd-gb 300 JF323861 JF323861   n/a
39r Hop stunt viroid isolate HSVd-WA-1 296 KC427095 KC427095   n/a
39s Hop stunt viroid isolate L8-18 302 KC878440 KC878440   n/a
39t Hop stunt viroid isolate Maragheh 297 JN008868 JN008868   n/a
39u Hop stunt viroid isolate Mor17 303 FR865478 FR865478   n/a
39v Hop stunt viroid isolate OR1c 297 KF137565 KF137565   n/a
39w Hop stunt viroid isolate pis60-ohadi 297 KC771553 KC771553   n/a
39x Hop stunt viroid strain HBO-D 302 KC290929 KC290929   n/a
39y Hop stunt viroid, clone 3593 301 HE575346 HE575346   n/a
40 Hop stunt viroid - citrus 300 AY513267 AY513267   n/a
41 Hop stunt viroid - cucumber 301 X07405 X07405   n/a
species Iresine viroid 1 
42a Iresine viroid 1 isolate 501-Slo 371 JQ889689 JQ889689   n/a
42b Iresine viroid 1 370 X95734 X95734   n/a
species Mexican papita viroid 
43 Mexican papita viroid 359 GQ131573 GQ131573   n/a
species Mulberry small circular viroid-like RNA 1 
44a Mulberry small circular viroid-like RNA 1 356 EU547491 EU547491   n/a
44b Mulberry small circular viroid-like RNA 1 isolate 201110151 357 JQ809700 JQ809700   n/a
species Pan troglodytes (Description) 
45 Pan troglodytes troglodytes mitochondrion, isolate Grand-Maitre 16,558 JF727178 JF727178   n/a
species Peach latent mosaic viroid 
46a Peach latent mosaic viroid 349 DQ222098 DQ222098   n/a
46b Peach latent mosaic viroid isolate AY09PG6 clone P6 337 HQ342884 HQ342884   n/a
46c Peach latent mosaic viroid isolate PLMVd-Otago 1 337 JN680784 JN680784   n/a
46d Peach latent mosaic viroid isolate RB18 338 JF898804 JF898804   n/a
46e Peach latent mosaic viroid isolate SD1 339 JF416648 JF416648   n/a
46f Peach latent mosaic viroid isolate V206 338 JF927893 JF927893   n/a
species Pear blister canker viroid 
47a Pear blister canker viroid isolate PB-TT31 315 HM233937 HM233937   n/a
47b Pear blister canker viroid PBCVd 315 D12823 D12823   n/a
species Pepper chat fruit viroid 
48a Pepper chat fruit viroid clone Pinit-2 348 KC143301 KC143301   n/a
48b Pepper chat fruit viroid clone Supattha 11 348 JF742640 JF742640   n/a
48c Pepper chat fruit viroid isolate 3264951 348 HQ731652 HQ731652   n/a
48d Pepper chat fruit viroid isolate EMAI12/759 349 KC762953 KC762953   n/a
48e Pepper chat fruit viroid isolate NK10-6c1 349 JF446894 JF446894   n/a
species Persimmon viroid 
49 Persimmon viroid 396 AB366022 AB366022   n/a
species Persimmon viroid 2 
50 Persimmon viroid 2 358 AB817729 AB817729   n/a
species Potato spindle tuber viroid 
51a Potato spindle tuber viroid 360 DQ315388 DQ315388   n/a
51b Potato spindle tuber viroid clone EL134-1 357 KF419168 KF419168   n/a
51c Potato spindle tuber viroid clone PSTVd_68 357 KF418774 KF418774   n/a
51d Potato spindle tuber viroid genomic RNA, strain: dahlia isolate 361 AB623143 AB623143   n/a
51e Potato spindle tuber viroid isolate BRIP54757 361 KF049417 KF049417   n/a
51f Potato spindle tuber viroid isolate ce2bc 363 HQ452407 HQ452407   n/a
51g Potato spindle tuber viroid isolate DCP_1124_2013 358 KF493732 KF493732   n/a
51h Potato spindle tuber viroid isolate diascia2 360 KC810006 KC810006   n/a
51i Potato spindle tuber viroid isolate DR13-01 358 KF683200 KF683200   n/a
51j Potato spindle tuber viroid isolate NC12-01 360 JX280944 JX280944   n/a
51k Potato spindle tuber viroid isolate oI33_2356 360 KF021223 KF021223   n/a
51l Potato spindle tuber viroid isolate PSTVd-1 359 HQ639697 HQ639697   n/a
51m Potato spindle tuber viroid isolate U-type-jasminoides 357 HQ454917 HQ454917   n/a
51n Potato spindle tuber viroid strain Armenia-83 361 JQ889839 JQ889839   n/a
51o Potato spindle tuber viroid, clone 2904 358 HE575349 HE575349   n/a
51p Potato spindle tuber viroid, isolate Cen-1 361 FR851463 FR851463   n/a
species Rice yellow mottle virus satellite 
52 Rice yellow mottle virus satellite 220 AF039909 AF039909   n/a
species Rubber viroid India/2009 
53 Rubber viroid India/2009 361 HM107846 HM107846   n/a
species Tomato apical stunt viroid 
54a Tomato apical stunt viroid 363 X06390 X06390   n/a
54b Tomato apical stunt viroid clone TASVd_31 364 KF437621 KF437621   n/a
54c Tomato apical stunt viroid isolate sj10 364 HQ667141 HQ667141   n/a
54d Tomato apical stunt viroid isolate Sj 499-Slo 364 JQ904911 JQ904911   n/a
54e Tomato apical stunt viroid isolate SjH2013 364 KF484878 KF484878   n/a
54f Tomato apical stunt viroid, isolate To1-IT 364 HG916812 HG916812   n/a
55 Tomato apical stunt viroid Sj1 364 AM777161 AM777161   n/a
species Tomato chlorotic dwarf viroid 
56a Tomato chlorotic dwarf viroid 360 AF162131 AF162131   n/a
56b Tomato chlorotic dwarf viroid 360 JQ975098 JQ975098   n/a
56c Tomato chlorotic dwarf viroid clone 1 385 JQ974378 JQ974378   n/a
56d Tomato chlorotic dwarf viroid isolate PP4-13 360 KJ817885 KJ817885   n/a
species Tomato planta macho viroid 
57 Tomato planta macho viroid 360 K00817 K00817   n/a
species Tomato yellow dwarf disease associated satellite DNA beta-[Kochi] 
58 Tomato yellow dwarf disease associated satellite DNA beta-[Kochi] 1,356 AB294512 AB294512   1 fasta UniProt

Page generated 2:48pm Mon 8-SEP-2014

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