Genomes Pages - Help

About The Pages

Genome entries have been listed in their appropriate category which may be browsed using the links on the left. While organelles are all listed in a seperate category, any from Eukaryota with chromosome entries are also listed in the Eukaryota page.

Within each page, entries are grouped and sorted at the species level with links to the taxonomy page for that species seperating each group. Within each species, entries whose source organism has been categorised further are grouped and numbered accordingly, eg

  Description Length (bp) Sequence Project Proteins
Plain HTML
Brucella abortus
198a Brucella abortus bv. 1 str. 9-941 chromosome I 2,124,241 AE017223 AE017223 9619 Proteome
198b Brucella abortus bv. 1 str. 9-941 chromosome II 1,162,204 AE017224 AE017224
199a Brucella abortus S19 chromosome 1 2,122,487 CP000887 CP000887 18999 Proteome
199b Brucella abortus S19 chromosome 2 1,161,449 CP000888 CP000888
200a Brucella melitensis biovar Abortus 2308 chromosome I 2,121,359 AM040264 AM040264 16203 Proteome
200b Brucella melitensis biovar Abortus 2308 chromosome II 1,156,948 AM040265 AM040265
Brucella canis
201a Brucella canis ATCC 23365 chromosome I 2,105,969 CP000872 CP000872 20243 Proteome
201b Brucella canis ATCC 23365 chromosome II 1,206,800 CP000873 CP000873
species Brucella melitensis
202a Brucella melitensis ATCC 23457 chromosome I 2,125,701 CP001488 CP001488 30561 Proteome
202b Brucella melitensis ATCC 23457 chromosome II 1,185,518 CP001489 CP001489
203a Brucella melitensis bv. 1 str. 16M chromosome I 2,117,144 AE008917 AE008917 180 Proteome
203b Brucella melitensis bv. 1 str. 16M chromosome II 1,177,787 AE008918 AE008918
species Brucella microti

Available Data

Links are made to:

  • taxonomy entries in both the white bar, and in their first entry's description
  • complete EMBL flatfile in the column "Sequence". The first link is to a plain text file, the second is to a page with active links.
  • CON files in the link labelled "CON". NB these are used for many of the largest entries
  • lists of CON segments where an entry is a CON, these are available from the link marked eg "(254 parts)"
  • Project records serve to tie together dispersed sets of nucleotide trace, sequence and annotation records from the archive that are considered to represent data collected as part of a coordinated large-scale nucleotide sequencing project.
  • Proteomes pages, where available, are linked by the word "Proteome" in the "Proteins" column
  • FASTA file of Proteins is available from the "FASTA" link in the "Proteins" column when no Proteomes page is available but UniProt entries have been produced from the genome
  • list of Proteins is available in the "Proteins" column when no Proteomes page is available

Page generated 11:38am Tue 5-MAY-2015