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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Bos taurus and hsa-miR-1

667 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NP_001029489.1 ENSBTAT00000030644 hypothetical protein LOC508236 [Source:RefSeq_peptide;Acc:NP_001029489]
19.4433 -21.43 1.62292e-10 269 13 10 45 [+] picture button
Q3ZCI4_BOVIN ENSBTAT00000017988 LOC514939 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3ZCI4]
16.0322 -15.19 4.79126e-10 385 17 9 42 [+] picture button
P25A_BOVIN ENSBTAT00000007046 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha). [Source:Uniprot/SWISSPROT;Acc:Q27957]
18.8168 -18.04 2.71308e-09 591 12 10 31 [+] picture button
LOC522719 ENSBTAT00000040078 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51790]Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51790] BY ORTHOLOGY TO:SINFRUT00000172006
17.9948 -17.05 1.8002e-08 600 13 8 16 [+] picture button
LOC518540 ENSBTAT00000004198 mesenchyme homeobox 2 [Source:RefSeq_peptide;Acc:NP_001005427]mesenchyme homeobox 2 [Source:RefSeq_peptide;Acc:NP_001005427] BY ORTHOLOGY TO:ENSGALT00000017555
16.9418 -15.44 3.623e-08 259 12 8 25 [+] picture button
LOC509905 ENSBTAT00000016997 Splicing factor, arginine/serine-rich 9. [Source:Uniprot/SWISSPROT;Acc:Q5PPI1]Splicing factor, arginine/serine-rich 9. [Source:Uniprot/SWISSPROT;Acc:Q5PPI1] BY ORTHOLOGY TO:ENSRNOT00000001539
17.2187 -13.86 7.31575e-08 350 15 8 47 [+] picture button
NP_001039607.1 ENSBTAT00000000641 hypothetical protein LOC513231 [Source:RefSeq_peptide;Acc:NP_001039607]
16.6527 -11.35 1.3063e-07 600 15 8 29 [+] picture button
LOC504967 ENSBTAT00000025973 hypothetical protein LOC768136 [Source:RefSeq_peptide;Acc:NP_001070750]hypothetical protein LOC768136 [Source:RefSeq_peptide;Acc:NP_001070750] BY ORTHOLOGY TO:ENSDART00000053576
16.1459 -11.98 1.46323e-07 130 5 6 23 [+] picture button
LOC782635 ENSBTAT00000044939 MON2 homolog [Source:RefSeq_peptide;Acc:NP_055841]MON2 homolog [Source:RefSeq_peptide;Acc:NP_055841] BY ORTHOLOGY TO:SINFRUT00000141542
16.9112 -15.11 2.40968e-07 519 16 12 38 [+] picture button
NP_001069588.1 ENSBTAT00000007534 hypothetical protein LOC538669 [Source:RefSeq_peptide;Acc:NP_001069588]
16.9689 -14.76 3.76138e-07 600 15 7 29 [+] picture button
NP_001069254.1 ENSBTAT00000043568 hypothetical protein LOC519337 [Source:RefSeq_peptide;Acc:NP_001069254]
16.683 -12.58 4.28826e-07 464 20 5 34 [+] picture button
SNX14 ENSBTAT00000024494 Sorting nexin-14. [Source:Uniprot/SWISSPROT;Acc:Q9Y5W7]
17.0555 -12.77 6.03964e-07 177 10 6 35 [+] picture button
Q3SYZ5_BOVIN ENSBTAT00000024514 DDX5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3SYZ5]
20.8077 -20.95 9.71838e-07 300 14 12 54 [+] picture button
NP_001068631.1 ENSBTAT00000001706 hypothetical protein LOC504456 [Source:RefSeq_peptide;Acc:NP_001068631]
16.1541 -10.9 1.13592e-06 467 15 4 24 [+] picture button
SC23B_BOVIN ENSBTAT00000024348 Protein transport protein Sec23B (SEC23-related protein B). [Source:Uniprot/SWISSPROT;Acc:Q3SZN2]
17.3966 -13.5 1.26223e-06 110 4 6 11 [+] picture button
CNN3_BOVIN ENSBTAT00000027115 Calponin-3 (Calponin, acidic isoform). [Source:Uniprot/SWISSPROT;Acc:Q32L92]
16.5385 -12.01 2.04061e-06 517 18 8 34 [+] picture button
PGM2 ENSBTAT00000007589 Phosphoglucomutase-2 (EC 5.4.2.2) (Glucose phosphomutase 2) (PGM 2). [Source:Uniprot/SWISSPROT;Acc:Q96G03]
16.3365 -14.61 3.02817e-06 600 17 2 28 [+] picture button
LOC504884 ENSBTAT00000015756 echinoderm microtubule associated protein like 3 (EML3), mRNA [Source:RefSeq_dna;Acc:NM_153265]echinoderm microtubule associated protein like 3 (EML3), mRNA [Source:RefSeq_dna;Acc:NM_153265] BY ORTHOLOGY TO:ENST00000278845
16.4419 -16.71 3.72364e-06 600 13 7 21 [+] picture button
XR_028590.1 ENSBTAT00000033190 PREDICTED: Bos taurus similar to centaurin gamma2 (LOC522241), mRNA. [Source:RefSeq_dna;Acc:XR_028590]
16.4781 -11.84 4.2845e-06 600 15 5 23 [+] picture button
LOC541150 ENSBTAT00000020914 round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869]round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869] BY ORTHOLOGY TO:SINFRUT00000162420
17.3121 -12.78 4.84532e-06 600 17 7 41 [+] picture button
LOC507057 ENSBTAT00000021255 PHD finger protein 12 (PHD factor 1) (Pf1). [Source:Uniprot/SWISSPROT;Acc:Q96QT6]PHD finger protein 12 (PHD factor 1) (Pf1). [Source:Uniprot/SWISSPROT;Acc:Q96QT6] BY ORTHOLOGY TO:ENSMODT00000024533
16.9511 -13.26 5.11698e-06 386 18 9 44 [+] picture button
LOC540573 ENSBTAT00000002384 Stanniocalcin 2. [Source:Uniprot/SPTREMBL;Acc:Q5IRA9]Stanniocalcin 2. [Source:Uniprot/SPTREMBL;Acc:Q5IRA9] BY ORTHOLOGY TO:SINFRUT00000178426
16.7581 -16.57 5.13494e-06 600 19 8 33 [+] picture button
TKT_BOVIN ENSBTAT00000004892 Transketolase (EC 2.2.1.1) (TK). [Source:Uniprot/SWISSPROT;Acc:Q6B855]
17.7377 -15.01 5.60556e-06 105 5 5 23 [+] picture button
LOC506212 ENSBTAT00000009988 CWF19-like 1, cell cycle control [Source:RefSeq_peptide;Acc:NP_001038223]CWF19-like 1, cell cycle control [Source:RefSeq_peptide;Acc:NP_001038223] BY ORTHOLOGY TO:ENSDART00000026509
16.8281 -11.88 5.97661e-06 289 14 4 49 [+] picture button
CH60_BOVIN ENSBTAT00000016708 60 kDa heat shock protein, mitochondrial (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60) (Mitochondrial matrix protein P1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P31081]
18.4444 -12.68 6.44668e-06 600 17 6 30 [+] picture button
RASA1_BOVIN ENSBTAT00000012583 Ras GTPase-activating protein 1 (GTPase-activating protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP). [Source:Uniprot/SWISSPROT;Acc:P09851]
17.3165 -15.07 7.07328e-06 743 14 10 19 [+] picture button
LOC617589 ENSBTAT00000005910 Clusterin-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96AJ1]Clusterin-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96AJ1] BY ORTHOLOGY TO:ENSGACT00000011528
17.4453 -14.5 7.11274e-06 320 14 5 43 [+] picture button
NP_001068824.1 ENSBTAT00000000357 hypothetical protein LOC508383 [Source:RefSeq_peptide;Acc:NP_001068824]
16.1615 -11.93 7.41368e-06 930 9 9 10 [+] picture button
ODBB_BOVIN ENSBTAT00000016044 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component beta chain) (BCKDH E1-beta). [Source:Uniprot/SWISSPROT;Acc:P21839]
18.4199 -16.61 7.67986e-06 271 13 4 28 [+] picture button
LOC616786 ENSBTAT00000046850 TATA element modulatory factor (TMF). [Source:Uniprot/SWISSPROT;Acc:P82094]TATA element modulatory factor (TMF). [Source:Uniprot/SWISSPROT;Acc:P82094] BY ORTHOLOGY TO:ENST00000356248
17.0555 -13.75 8.10979e-06 78 2 4 6 [+] picture button
LOC538491 ENSBTAT00000023028 transmembrane protein 178 [Source:MarkerSymbol;Acc:MGI:1915277]transmembrane protein 178 [Source:MarkerSymbol;Acc:MGI:1915277] BY ORTHOLOGY TO:ENSMUST00000025092
19.3084 -19.51 8.39299e-06 319 15 9 43 [+] picture button
CLTC ENSBTAT00000022210 Clathrin heavy chain 1 (CLH-17). [Source:Uniprot/SWISSPROT;Acc:Q00610]
17.0051 -15.19 8.86571e-06 600 8 10 18 [+] picture button
ASZ1_BOVIN ENSBTAT00000000194 Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 (Germ cell-specific ankyrin, SAM and basic leucine zipper domain- containing protein). [Source:Uniprot/SWISSPROT;Acc:Q8WMX8]
16.7144 -10.48 9.45272e-06 271 13 5 38 [+] picture button
TLR3_BOVIN ENSBTAT00000011445 Toll-like receptor 3 precursor (CD283 antigen). [Source:Uniprot/SWISSPROT;Acc:Q5TJ59]
16.9418 -8.57 1.01694e-05 196 8 3 17 [+] picture button
WDR61_BOVIN ENSBTAT00000021203 WD repeat protein 61. [Source:Uniprot/SWISSPROT;Acc:Q32LN7]
18.0788 -10.09 1.10003e-05 124 4 11 14 [+] picture button
LOC516630 ENSBTAT00000010673 SNF2 histone linker PHD RING helicase isoform a [Source:RefSeq_peptide;Acc:NP_001036148]SNF2 histone linker PHD RING helicase isoform a [Source:RefSeq_peptide;Acc:NP_001036148] BY ORTHOLOGY TO:ENSGACT00000015359
16.7144 -15.33 1.23154e-05 235 9 1 28 [+] picture button
ARGI2_BOVIN ENSBTAT00000002529 Arginase-2, mitochondrial precursor (EC 3.5.3.1) (Arginase II). [Source:Uniprot/SWISSPROT;Acc:Q58DL1]
16.5473 -13.31 1.32366e-05 600 14 3 26 [+] picture button
NP_001069593.1 ENSBTAT00000024215 hypothetical protein LOC538731 [Source:RefSeq_peptide;Acc:NP_001069593]
15.9958 -13.98 1.43197e-05 393 14 6 25 [+] picture button
NP_001035698.1 ENSBTAT00000019763 metaxin 1 [Source:RefSeq_peptide;Acc:NP_001035698]
17.2829 -15.36 1.85128e-05 126 5 6 11 [+] picture button
PWP1_BOVIN ENSBTAT00000006109 Periodic tryptophan protein 1 homolog. [Source:Uniprot/SWISSPROT;Acc:Q2HJ56]
17.0555 -12.42 2.02942e-05 241 11 3 31 [+] picture button
NP_001070388.1 ENSBTAT00000010001 hypothetical protein LOC539950 [Source:RefSeq_peptide;Acc:NP_001070388]
17.2066 -16.71 2.0977e-05 697 20 9 35 [+] picture button
LOC789082 ENSBTAT00000044316 Splicing factor 3A subunit 2 (Spliceosome-associated protein 62) (SAP 62) (SF3a66). [Source:Uniprot/SWISSPROT;Acc:Q15428]Splicing factor 3A subunit 2 (Spliceosome-associated protein 62) (SAP 62) (SF3a66). [Source:Uniprot/SWISSPROT;Acc:Q15428] BY ORTHOLOGY TO:ENSMMUT00000014114
16.7581 -12.71 2.25218e-05 600 18 1 27 [+] picture button
NP_001069332.1 ENSBTAT00000017685 phospholipase A2 group IVA [Source:RefSeq_peptide;Acc:NP_001069332]
18.27 -18.88 2.27714e-05 473 16 5 35 [+] picture button
NP_001069172.1 ENSBTAT00000012157 hypothetical protein LOC515243 [Source:RefSeq_peptide;Acc:NP_001069172]
19.1021 -13.47 2.55072e-05 224 9 3 18 [+] picture button
XR_027862.1 ENSBTAT00000003628 PREDICTED: Bos taurus similar to neurobeachin (LOC525624), mRNA. [Source:RefSeq_dna;Acc:XR_027862]
17.9589 -13.41 2.63304e-05 600 16 6 26 [+] picture button
LOC790572 ENSBTAT00000019294 WD repeat protein 19. [Source:Uniprot/SWISSPROT;Acc:Q8NEZ3]WD repeat protein 19. [Source:Uniprot/SWISSPROT;Acc:Q8NEZ3] BY ORTHOLOGY TO:ENST00000288634
16.3383 -13.1 2.86211e-05 325 15 4 56 [+] picture button
LOC507620 ENSBTAT00000008398 Partner and localizer of BRCA2. [Source:Uniprot/SWISSPROT;Acc:Q86YC2]Partner and localizer of BRCA2. [Source:Uniprot/SWISSPROT;Acc:Q86YC2] BY ORTHOLOGY TO:ENSGALT00000009810
16.2596 -8.67 3.3519e-05 295 17 7 60 [+] picture button
LOC616906 ENSBTAT00000025111 eukaryotic translation initiation factor 4E member 3 [Source:RefSeq_peptide;Acc:NP_775495]eukaryotic translation initiation factor 4E member 3 [Source:RefSeq_peptide;Acc:NP_775495] BY ORTHOLOGY TO:ENSMMUT00000010896
16.4487 -10.49 3.57075e-05 608 17 7 39 [+] picture button
XR_027928.1 ENSBTAT00000043179 PREDICTED: Bos taurus hypothetical protein LOC784636 (LOC784636), mRNA. [Source:RefSeq_dna;Acc:XR_027928]
16.4419 -14.08 3.65965e-05 600 20 7 36 [+] picture button
LOC539754 ENSBTAT00000024529 Ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast). [Source:Uniprot/SPTREMBL;Acc:Q5U4Q5]Ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast). [Source:Uniprot/SPTREMBL;Acc:Q5U4Q5] BY ORTHOLOGY TO:ENSXETT00000041428
17.9318 -16.11 3.70898e-05 403 16 6 32 [+] picture button

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Download table: GFF TXT
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