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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Bos taurus and bta-miR-29c

1045 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC515860 ENSBTAT00000043174 peroxidasin homolog [Source:RefSeq_peptide;Acc:NP_036425]peroxidasin homolog [Source:RefSeq_peptide;Acc:NP_036425] BY ORTHOLOGY TO:ENSPTRT00000021645
16.9424 -14.45 0.000000000422318 366 13 7 29 [+] picture button
Q7M2X3_BOVIN ENSBTAT00000019400 Collagen alpha 5(IV) chain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7M2X3]
18.2288 -18.05 0.000000000594948 483 18 10 36 [+] picture button
LOC525592 ENSBTAT00000047829 Glutamate receptor-interacting protein 1 (GRIP1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3R0]Glutamate receptor-interacting protein 1 (GRIP1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3R0] BY ORTHOLOGY TO:ENSORLT00000021826
17.1796 -16.22 0.00000000149618 600 10 11 14 [+] picture button
NP_001068594.1 ENSBTAT00000025663 collagen, type VI, alpha 2 [Source:RefSeq_peptide;Acc:NP_001068594]
16.336 -15.75 0.00000000448382 600 15 4 25 [+] picture button
MFAP2_BOVIN ENSBTAT00000004994 Microfibrillar-associated protein 2 precursor (MFAP-2) (Microfibril- associated glycoprotein) (MAGP) (MAGP-1) (Tropoelastin-binding protein). [Source:Uniprot/SWISSPROT;Acc:P27424]
15.7865 -13.54 0.00000000999724 344 18 7 39 [+] picture button
LOC540252 ENSBTAT00000011028 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137] BY ORTHOLOGY TO:ENST00000306917
18.0842 -21.36 0.0000000125157 600 13 7 20 [+] picture button
LOC789054 ENSBTAT00000038616 SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224]SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224] BY ORTHOLOGY TO:ENST00000389480
18.8961 -16.68 0.0000000152961 591 15 10 27 [+] picture button
LOC517422 ENSBTAT00000014248 REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1337131]REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:1337131] BY ORTHOLOGY TO:ENSMUST00000019986
18.3646 -18.43 0.0000000165594 451 16 9 37 [+] picture button
LOC517559 ENSBTAT00000023621 hypothetical protein LOC568877 [Source:RefSeq_peptide;Acc:NP_001034447]hypothetical protein LOC568877 [Source:RefSeq_peptide;Acc:NP_001034447] BY ORTHOLOGY TO:ENSDART00000036277
17.6293 -17.35 0.0000000179166 600 12 7 17 [+] picture button
ADAMTS7 ENSBTAT00000038814 ADAM metallopeptidase with thrombospondin type 1 motif, 7 preproprotein [Source:RefSeq_peptide;Acc:NP_055087]
16.628 -16.57 0.0000000207757 600 18 8 31 [+] picture button
Q9HCM6_HUMAN ENSBTAT00000023517 Homolog of Homo sapiens "CXXC finger 6 [Source:UniGene;Acc:Hs.156905]"Homolog of Homo sapiens "CXXC finger 6 [Source:UniGene;Acc:Hs.156905]" BY ORTHOLOGY TO:SINFRUT00000166785
15.8095 -14.11 0.0000000340622 600 14 3 16 [+] picture button
NP_001069849.1 ENSBTAT00000012561 hypothetical protein LOC615542 [Source:RefSeq_peptide;Acc:NP_001069849]
15.59 -22.75 0.0000000383458 450 15 7 33 [+] picture button
NP_001039661.1 ENSBTAT00000007265 HMG-box transcription factor 1 [Source:RefSeq_peptide;Acc:NP_001039661]
17.6689 -24.41 0.0000000464818 1019 14 9 18 [+] picture button
LOXL4_BOVIN ENSBTAT00000027838 Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl oxidase-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q8MJ24]
15.9027 -17.66 0.0000000676529 1207 8 6 8 [+] picture button
Q9GK14_BOVIN ENSBTAT00000010506 Hayluronic acid synthase 3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9GK14]
16.6527 -20.2 0.0000000719999 600 16 6 34 [+] picture button
Q6PT98_BOVIN ENSBTAT00000047907 Gamma-inducible protein 30 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PT98]
18.0228 -18.57 0.0000000904478 600 18 6 24 [+] picture button
LOC517045 ENSBTAT00000029368 Armadillo repeat protein deleted in velo-cardio-facial syndrome. [Source:Uniprot/SWISSPROT;Acc:O00192]Armadillo repeat protein deleted in velo-cardio-facial syndrome. [Source:Uniprot/SWISSPROT;Acc:O00192] BY ORTHOLOGY TO:ENSMMUT00000024112
16.8417 -16.59 0.000000127966 479 19 5 28 [+] picture button
LOC538296 ENSBTAT00000027603 Transcription regulator protein BACH2 (BTB and CNC homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q9BYV9]Transcription regulator protein BACH2 (BTB and CNC homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q9BYV9] BY ORTHOLOGY TO:ENSORLT00000022437
18.0283 -20.21 0.000000153955 600 17 9 35 [+] picture button
NP_001070459.1 ENSBTAT00000038641 hypothetical protein LOC767914 [Source:RefSeq_peptide;Acc:NP_001070459]
17.624 -18.95 0.00000015783 76 3 7 9 [+] picture button
XR_028341.1 ENSBTAT00000003252 PREDICTED: Bos taurus similar to iron-responsive element binding protein 2 (LOC539404), mRNA. [Source:RefSeq_dna;Acc:XR_028341]
18.2209 -20.13 0.000000228504 604 19 9 31 [+] picture button
LOC618340 ENSBTAT00000024191 nuclear prelamin A recognition factor isoform a [Source:RefSeq_peptide;Acc:NP_036468]nuclear prelamin A recognition factor isoform a [Source:RefSeq_peptide;Acc:NP_036468] BY ORTHOLOGY TO:ENSMMUT00000027005
18.5336 -20.16 0.000000233245 241 11 5 31 [+] picture button
TBB2B_BOVIN ENSBTAT00000044261 Tubulin beta-2B chain. [Source:Uniprot/SWISSPROT;Acc:Q6B856]
17.1692 -14.89 0.000000241838 192 10 10 31 [+] picture button
LOC540478 ENSBTAT00000011468 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92]Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92] BY ORTHOLOGY TO:ENSGALT00000018023
15.9403 -16.2 0.000000277854 600 20 11 34 [+] picture button
LOC784353 ENSBTAT00000012676 ATPase family AAA domain-containing protein 3A. [Source:Uniprot/SWISSPROT;Acc:Q9NVI7]ATPase family AAA domain-containing protein 3A. [Source:Uniprot/SWISSPROT;Acc:Q9NVI7] BY ORTHOLOGY TO:SINFRUT00000174538
15.9914 -15.07 0.000000363771 394 17 2 33 [+] picture button
LOC790594 ENSBTAT00000021597 Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45]Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45] BY ORTHOLOGY TO:ENSOANT00000001176
16.743 -16.21 0.00000039307 600 19 7 29 [+] picture button
A0JN88_BOVIN ENSBTAT00000005740 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A0JN88]
17.2402 -20.73 0.00000046957 615 16 5 20 [+] picture button
PITPNM2 ENSBTAT00000002093 Membrane-associated phosphatidylinositol transfer protein 2 (Phosphatidylinositol transfer protein, membrane-associated 2) (Pyk2 N-terminal domain-interacting receptor 3) (NIR-3). [Source:Uniprot/SWISSPROT;Acc:Q9BZ72]
16.4419 -19.48 0.000000498419 600 16 6 33 [+] picture button
Q5TF58_HUMAN ENSBTAT00000006694 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5TF58]
16.4527 -15.81 0.00000056273 600 15 6 20 [+] picture button
XR_027400.1 ENSBTAT00000031096 PREDICTED: Bos taurus hypothetical protein LOC781477 (LOC781477), mRNA. [Source:RefSeq_dna;Acc:XR_027400]
15.7177 -16.29 0.000000616868 562 19 10 43 [+] picture button
Q05KI7_BOVIN ENSBTAT00000000549 Bcl-2 homologous antagonist/killer transcript variant 1. [Source:Uniprot/SPTREMBL;Acc:Q05KI7]
18.0017 -15.64 0.000000724948 368 16 6 34 [+] picture button
LOC507881 ENSBTAT00000013440 Collagen alpha-3(V) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P25940]Collagen alpha-3(V) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P25940] BY ORTHOLOGY TO:ENSORLT00000011964
16.8217 -18.06 0.00000119676 339 15 6 35 [+] picture button
LOC618048 ENSBTAT00000008495 Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH). [Source:Uniprot/SWISSPROT;Acc:Q9Y6W3]Calpain-7 (EC 3.4.22.-) (PalB homolog) (PalBH). [Source:Uniprot/SWISSPROT;Acc:Q9Y6W3] BY ORTHOLOGY TO:SINFRUT00000162124
15.3971 -15.1 0.00000125207 491 16 3 37 [+] picture button
NP_001070378.1 ENSBTAT00000002051 hypothetical protein LOC535494 [Source:RefSeq_peptide;Acc:NP_001070378]
17.1796 -17.84 0.00000127201 600 16 6 34 [+] picture button
LOC521431 ENSBTAT00000020665 Uncharacterized protein C9orf126. [Source:Uniprot/SWISSPROT;Acc:Q8N9R8]Uncharacterized protein C9orf126. [Source:Uniprot/SWISSPROT;Acc:Q8N9R8] BY ORTHOLOGY TO:ENSORLT00000015607
17.8694 -21.5 0.00000132693 600 13 5 21 [+] picture button
LOC518090 ENSBTAT00000021750 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72]XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72] BY ORTHOLOGY TO:ENSXETT00000005440
16.5473 -18.7 0.00000134755 600 18 9 24 [+] picture button
LOC507180 ENSBTAT00000008423 Hypothetical protein CG9548. [Source:Uniprot/SWISSPROT;Acc:Q9VMC8]Hypothetical protein CG9548. [Source:Uniprot/SWISSPROT;Acc:Q9VMC8] BY ORTHOLOGY TO:CG9548-RA
18.4945 -23.33 0.00000142549 563 16 2 29 [+] picture button
A0JN94_BOVIN ENSBTAT00000010202 MGC142522 protein. [Source:Uniprot/SPTREMBL;Acc:A0JN94]
16.6763 -18.01 0.00000182235 600 18 3 35 [+] picture button
XR_028558.1 ENSBTAT00000025329 PREDICTED: Bos taurus hypothetical LOC513388 (LOC513388), mRNA. [Source:RefSeq_dna;Acc:XR_028558]
17.3904 -16.33 0.00000259077 600 14 7 25 [+] picture button
LOC527199 ENSBTAT00000019163 CG7832-PA [Source:RefSeq_peptide;Acc:NP_650379]CG7832-PA [Source:RefSeq_peptide;Acc:NP_650379] BY ORTHOLOGY TO:CG7832-RA
15.4263 -13.33 0.00000264446 600 10 8 13 [+] picture button
NP_001030217.1 ENSBTAT00000004145 fascin homolog 1, actin-bundling protein [Source:RefSeq_peptide;Acc:NP_001030217]
15.2927 -24.06 0.00000275182 1109 8 4 10 [+] picture button
CO3A1_BOVIN ENSBTAT00000038012 Collagen alpha-1(III) chain. [Source:Uniprot/SWISSPROT;Acc:P04258]
15.914 -17.14 0.00000285587 940 11 7 12 [+] picture button
LOC505853 ENSBTAT00000021048 p20 (LOC130074), mRNA [Source:RefSeq_dna;Acc:NM_001009993]p20 (LOC130074), mRNA [Source:RefSeq_dna;Acc:NM_001009993] BY ORTHOLOGY TO:SINFRUT00000132772
16.385 -17.35 0.00000297085 488 21 5 42 [+] picture button
MLF1_BOVIN ENSBTAT00000005403 Myeloid leukemia factor 1 (Myelodysplasia-myeloid leukemia factor 1). [Source:Uniprot/SWISSPROT;Acc:Q32KY3]
16.5473 -18.19 0.00000298084 600 15 7 25 [+] picture button
LOC540021 ENSBTAT00000024230 polyhomeotic-like 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:103248]polyhomeotic-like 1 (Drosophila) [Source:MarkerSymbol;Acc:MGI:103248] BY ORTHOLOGY TO:ENSMUST00000079560
15.9318 -20.7 0.00000304098 594 17 6 30 [+] picture button
NP_001032528.1 ENSBTAT00000004131 hypothetical protein LOC507444 [Source:RefSeq_peptide;Acc:NP_001032528]
15.7041 -16.91 0.00000310257 600 15 5 28 [+] picture button
LOC509694 ENSBTAT00000011818 Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22). [Source:Uniprot/SWISSPROT;Acc:Q9UPT9]Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22). [Source:Uniprot/SWISSPROT;Acc:Q9UPT9] BY ORTHOLOGY TO:ENSGALT00000007615
15.8584 -14.33 0.00000313884 689 15 2 21 [+] picture button
LOC790378 ENSBTAT00000020280 Hemicentin-1 precursor (Fibulin-6) (FIBL-6). [Source:Uniprot/SWISSPROT;Acc:Q96RW7]Hemicentin-1 precursor (Fibulin-6) (FIBL-6). [Source:Uniprot/SWISSPROT;Acc:Q96RW7] BY ORTHOLOGY TO:ENSGACT00000009770
15.2362 -14.97 0.00000335365 190 11 6 29 [+] picture button
DDX4_BOVIN ENSBTAT00000011682 Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-) (DEAD box protein 4). [Source:Uniprot/SWISSPROT;Acc:Q5W5U4]
18.0788 -18.28 0.00000372039 232 9 7 31 [+] picture button
Q702H2_BOVIN ENSBTAT00000008336 Organic anion transporter 2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q702H2]
16.0203 -14.41 0.00000391348 600 18 3 27 [+] picture button
Q6ZMW3_HUMAN ENSBTAT00000040209 CDNA FLJ16635 fis, clone TESTI4025268, weakly similar to 77 kDa echinoderm microtubule-associated protein. [Source:Uniprot/SPTREMBL;Acc:Q6ZMW3]
18.5279 -24.87 0.00000404434 394 10 3 20 [+] picture button

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Download table: GFF TXT
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