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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Bos taurus and bta-miR-16

902 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC533526 ENSBTAT00000045316 G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P24864]G1/S-specific cyclin-E1. [Source:Uniprot/SWISSPROT;Acc:P24864] BY ORTHOLOGY TO:ENSORLT00000019429
17.1042 -16.11 8.00024e-09 550 17 9 33 [+] picture button
Q0V8N8_BOVIN ENSBTAT00000024364 Hypothetical protein SETD3 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0V8N8]
17.3749 -13.41 1.40431e-08 600 16 9 31 [+] picture button
LOC534928 ENSBTAT00000008887 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (6PF-2-K/Fru- 2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]. [Source:Uniprot/SWISSPROT;Acc:Q16877]6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (6PF-2-K/Fru- 2,6-P2ASE testis-type isozyme) [Includes: 6-phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]. [Source:Uniprot/SWISSPROT;Acc:Q16877] BY ORTHOLOGY TO:ENSOANT00000006831
16.6288 -15.33 2.20999e-08 600 19 5 37 [+] picture button
EDA_BOVIN ENSBTAT00000016649 Ectodysplasin-A (Ectodysplasin-1) (Ectodermal dysplasia protein) [Contains: Ectodysplasin-A, membrane form; Ectodysplasin-A, secreted form]. [Source:Uniprot/SWISSPROT;Acc:Q9BEG5]
16.9465 -16.84 3.47022e-08 600 16 6 32 [+] picture button
LOC524531 ENSBTAT00000025716 Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21). [Source:Uniprot/SWISSPROT;Acc:Q9UHP3]Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15) (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21). [Source:Uniprot/SWISSPROT;Acc:Q9UHP3] BY ORTHOLOGY TO:SINFRUT00000152120
16.2051 -16.74 1.322e-07 600 15 7 35 [+] picture button
LOC523186 ENSBTAT00000034372 pleckstrin homology domain interacting protein [Source:RefSeq_peptide;Acc:NP_060404]pleckstrin homology domain interacting protein [Source:RefSeq_peptide;Acc:NP_060404] BY ORTHOLOGY TO:SINFRUT00000139274
17.4651 -13.73 2.33314e-07 600 9 9 16 [+] picture button
LOC789183 ENSBTAT00000027897 Protein FAM38A. [Source:Uniprot/SWISSPROT;Acc:Q92508]Protein FAM38A. [Source:Uniprot/SWISSPROT;Acc:Q92508] BY ORTHOLOGY TO:ENSORLT00000000496
16.2317 -16.17 4.59511e-07 159 7 10 34 [+] picture button
LOC506331 ENSBTAT00000006986 cofactor required for Sp1 transcriptional activation, subunit 7 [Source:MarkerSymbol;Acc:MGI:1917875]cofactor required for Sp1 transcriptional activation, subunit 7 [Source:MarkerSymbol;Acc:MGI:1917875] BY ORTHOLOGY TO:ENSMUST00000058534
15.8976 -17.02 7.34642e-07 600 17 9 28 [+] picture button
LOC540322 ENSBTAT00000006939 wee 1 homolog (S. pombe) [Source:MarkerSymbol;Acc:MGI:103075]wee 1 homolog (S. pombe) [Source:MarkerSymbol;Acc:MGI:103075] BY ORTHOLOGY TO:ENSMUST00000033326
16.889 -17.7 8.18402e-07 600 21 8 57 [+] picture button
XR_028079.1 ENSBTAT00000008300 PREDICTED: Bos taurus similar to RNA binding protein DEF-3 (LOC510737), mRNA. [Source:RefSeq_dna;Acc:XR_028079]
18.0606 -13.4 8.23016e-07 120 7 7 28 [+] picture button
NP_001039384.1 ENSBTAT00000010155 follicular lymphoma variant translocation 1 [Source:RefSeq_peptide;Acc:NP_001039384]
16.5506 -15.33 8.38589e-07 440 15 8 40 [+] picture button
LOC513678 ENSBTAT00000023380 Serine/threonine-protein kinase Chk1 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:O14757]Serine/threonine-protein kinase Chk1 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:O14757] BY ORTHOLOGY TO:ENSOANT00000010078
18.5179 -19.79 8.78606e-07 63 4 9 16 [+] picture button
LOC517696 ENSBTAT00000003785 Probable G-protein coupled receptor 63 (PSP24-beta) (PSP24-2). [Source:Uniprot/SWISSPROT;Acc:Q9BZJ6]Probable G-protein coupled receptor 63 (PSP24-beta) (PSP24-2). [Source:Uniprot/SWISSPROT;Acc:Q9BZJ6] BY ORTHOLOGY TO:SINFRUT00000181772
17.2951 -15.89 1.18692e-06 600 21 9 56 [+] picture button
XR_027928.1 ENSBTAT00000043179 PREDICTED: Bos taurus hypothetical protein LOC784636 (LOC784636), mRNA. [Source:RefSeq_dna;Acc:XR_027928]
17.7939 -17.71 1.57528e-06 600 20 7 36 [+] picture button
RPO3F_BOVIN ENSBTAT00000011619 DNA-directed RNA polymerase III subunit F (EC 2.7.7.6). [Source:Uniprot/SWISSPROT;Acc:Q2T9S3]
16.2204 -14.56 1.58589e-06 770 15 7 21 [+] picture button
Q32KV9_BOVIN ENSBTAT00000047359 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q32KV9]
17.2605 -17.28 1.82867e-06 276 14 9 37 [+] picture button
LOC529395 ENSBTAT00000011598 Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4]Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4] BY ORTHOLOGY TO:ENSGALT00000005420
18.4018 -14.94 1.9745e-06 407 16 9 46 [+] picture button
LOC504380 ENSBTAT00000007769 Zinc finger protein 508. [Source:Uniprot/SWISSPROT;Acc:Q6IQ32]Zinc finger protein 508. [Source:Uniprot/SWISSPROT;Acc:Q6IQ32] BY ORTHOLOGY TO:ENSMODT00000015225
16.1751 -15.08 2.3614e-06 600 14 5 23 [+] picture button
MUM1 ENSBTAT00000009840 melanoma ubiquitous mutated protein [Source:RefSeq_peptide;Acc:NP_116242]
16.4913 -15.18 3.80398e-06 600 17 2 35 [+] picture button
LOC512490 ENSBTAT00000009642 Syntaxin-binding protein 3 (Unc-18 homolog 3) (Unc-18C) (Unc-18-3) (Platelet Sec1 protein) (PSP). [Source:Uniprot/SWISSPROT;Acc:O00186]Syntaxin-binding protein 3 (Unc-18 homolog 3) (Unc-18C) (Unc-18-3) (Platelet Sec1 protein) (PSP). [Source:Uniprot/SWISSPROT;Acc:O00186] BY ORTHOLOGY TO:ENSMODT00000002872
16.1299 -13.44 3.90491e-06 627 12 8 19 [+] picture button
AVR2A_BOVIN ENSBTAT00000024108 Activin receptor type-2A precursor (EC 2.7.11.30) (Activin receptor type IIA) (ACTR-IIA). [Source:Uniprot/SWISSPROT;Acc:Q28043]
18.8935 -24.3 4.63364e-06 600 16 10 29 [+] picture button
SVEP1 ENSBTAT00000001939 polydom [Source:RefSeq_peptide;Acc:NP_699197]
17.0148 -10.82 5.16793e-06 361 17 7 50 [+] picture button
A0JN68_BOVIN ENSBTAT00000004603 MGC142400 protein. [Source:Uniprot/SPTREMBL;Acc:A0JN68]
16.6733 -16.23 5.41067e-06 600 17 11 39 [+] picture button
SALL4 ENSBTAT00000004035 Sal-like protein 4 (Zinc finger protein SALL4). [Source:Uniprot/SWISSPROT;Acc:Q9UJQ4]
17.7973 -18.38 5.48018e-06 600 13 6 30 [+] picture button
HELZ ENSBTAT00000006233 Probable helicase with zinc-finger domain (EC 3.6.1.-). [Source:Uniprot/SWISSPROT;Acc:P42694]
17.6034 -13.89 6.0162e-06 298 15 9 49 [+] picture button
LOC521089 ENSBTAT00000018825 Cyclin-T2 (CycT2). [Source:Uniprot/SWISSPROT;Acc:O60583]Cyclin-T2 (CycT2). [Source:Uniprot/SWISSPROT;Acc:O60583] BY ORTHOLOGY TO:ENSMODT00000000892
18.4294 -23.92 6.23656e-06 600 22 10 42 [+] picture button
LOC512753 ENSBTAT00000018920 cDNA sequence BC003266 [Source:MarkerSymbol;Acc:MGI:1933141]cDNA sequence BC003266 [Source:MarkerSymbol;Acc:MGI:1933141] BY ORTHOLOGY TO:ENSMUST00000046609
15.8874 -12.9 7.31674e-06 600 19 4 33 [+] picture button
NP_001070408.1 ENSBTAT00000009138 hypothetical protein LOC615677 [Source:RefSeq_peptide;Acc:NP_001070408]
16.346 -10.04 8.0761e-06 180 9 4 29 [+] picture button
CATD_BOVIN ENSBTAT00000010022 Cathepsin D precursor (EC 3.4.23.5). [Source:Uniprot/SWISSPROT;Acc:P80209]
17.0849 -15.16 9.11498e-06 402 13 3 37 [+] picture button
XR_027470.1 ENSBTAT00000020443 PREDICTED: Bos taurus hypothetical LOC510743 (LOC510743), mRNA. [Source:RefSeq_dna;Acc:XR_027470]
16.823 -18.65 9.43039e-06 507 11 4 19 [+] picture button
NP_001039594.1 ENSBTAT00000016002 WD repeat domain, phosphoinositide interacting 1 [Source:RefSeq_peptide;Acc:NP_001039594]
15.89 -14.1 9.4951e-06 541 17 6 33 [+] picture button
Q05B84_BOVIN ENSBTAT00000007877 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q05B84]
17.0319 -13.36 1.1034e-05 187 11 6 29 [+] picture button
LOC525946 ENSBTAT00000008354 Ephrin type-A receptor 1 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor EPH). [Source:Uniprot/SWISSPROT;Acc:P21709]Ephrin type-A receptor 1 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor EPH). [Source:Uniprot/SWISSPROT;Acc:P21709] BY ORTHOLOGY TO:ENSMODT00000001819
17.3748 -16.47 1.12282e-05 255 10 6 37 [+] picture button
Q0Z7W4_BOVIN ENSBTAT00000033031 CaM kinase-like 1 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0Z7W4]
16.6288 -13.99 1.12654e-05 600 13 6 23 [+] picture button
ECEL1 ENSBTAT00000028037 Endothelin-converting enzyme-like 1 (EC 3.4.24.-) (Xce protein). [Source:Uniprot/SWISSPROT;Acc:O95672]
17.3702 -15.56 1.12899e-05 600 19 7 39 [+] picture button
LOC540479 ENSBTAT00000017489 Merlin (Moesin-ezrin-radixin-like protein) (Neurofibromin-2) (Schwannomin) (Schwannomerlin). [Source:Uniprot/SWISSPROT;Acc:P35240]Merlin (Moesin-ezrin-radixin-like protein) (Neurofibromin-2) (Schwannomin) (Schwannomerlin). [Source:Uniprot/SWISSPROT;Acc:P35240] BY ORTHOLOGY TO:ENSOANT00000001029
15.8874 -18.19 1.14378e-05 600 16 3 23 [+] picture button
LOC537625 ENSBTAT00000017179 Uncharacterized protein C6orf204 (Serologically defined breast cancer antigen NY-BR-15). [Source:Uniprot/SPTREMBL;Acc:Q5SZL2]Uncharacterized protein C6orf204 (Serologically defined breast cancer antigen NY-BR-15). [Source:Uniprot/SPTREMBL;Acc:Q5SZL2] BY ORTHOLOGY TO:ENSXETT00000028140
16.5863 -18.72 1.2802e-05 600 13 5 29 [+] picture button
ARL3_BOVIN ENSBTAT00000005655 ADP-ribosylation factor-like protein 3. [Source:Uniprot/SWISSPROT;Acc:Q2TBW6]
16.4641 -12.2 1.39656e-05 600 10 7 19 [+] picture button
LOC506029 ENSBTAT00000025696 Pseudokinase ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein) (STRAD beta) (ILP-interacting protein) (CALS-21). [Source:Uniprot/SWISSPROT;Acc:Q9C0K7]Pseudokinase ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein) (STRAD beta) (ILP-interacting protein) (CALS-21). [Source:Uniprot/SWISSPROT;Acc:Q9C0K7] BY ORTHOLOGY TO:SINFRUT00000162209
16.6826 -10.19 1.41008e-05 582 17 9 25 [+] picture button
LOC782020 ENSBTAT00000022174 Phosphotriesterase-related protein (Parathion hydrolase-related protein) (HPHRP). [Source:Uniprot/SWISSPROT;Acc:Q96BW5]Phosphotriesterase-related protein (Parathion hydrolase-related protein) (HPHRP). [Source:Uniprot/SWISSPROT;Acc:Q96BW5] BY ORTHOLOGY TO:ENSMMUT00000022591
16.1635 -11.63 1.45045e-05 480 16 6 27 [+] picture button
NP_001029924.1 ENSBTAT00000029088 hypothetical protein LOC614215 [Source:RefSeq_peptide;Acc:NP_001029924]
17.9463 -19.22 1.50814e-05 132 8 5 28 [+] picture button
XR_027815.1 ENSBTAT00000011697 PREDICTED: Bos taurus hypothetical LOC535434 (LOC535434), mRNA. [Source:RefSeq_dna;Acc:XR_027815]
16.7228 -16.79 1.51693e-05 600 17 8 38 [+] picture button
LOC523367 ENSBTAT00000047558 SHC SH2 domain-binding protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8NEM2]SHC SH2 domain-binding protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8NEM2] BY ORTHOLOGY TO:SINFRUT00000146661
18.7465 -18.41 1.61199e-05 188 11 6 36 [+] picture button
NP_001033249.1 ENSBTAT00000032389 Bardet-Biedl syndrome 2 [Source:RefSeq_peptide;Acc:NP_001033249]
15.9713 -18.11 1.67436e-05 346 15 7 57 [+] picture button
LOC540948 ENSBTAT00000026560 NEDD4-binding protein 1 (N4BP1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O75113]NEDD4-binding protein 1 (N4BP1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O75113] BY ORTHOLOGY TO:ENSMMUT00000026676
16.1751 -14.42 1.79e-05 600 14 7 22 [+] picture button
PTHY_BOVIN ENSBTAT00000025399 Parathyroid hormone precursor (Parathyrin) (PTH). [Source:Uniprot/SWISSPROT;Acc:P01268]
20.0039 -20.96 1.84495e-05 224 11 6 36 [+] picture button
SIRT4_BOVIN ENSBTAT00000028210 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-). [Source:Uniprot/SWISSPROT;Acc:Q1JQC6]
16.574 -12.69 1.96282e-05 431 17 4 38 [+] picture button
LOC520730 ENSBTAT00000019472 WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03]WW domain-containing protein 1 (Kidney and brain protein) (KIBRA) (HBeAg-binding protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IX03] BY ORTHOLOGY TO:ENSGALT00000002822
17.6615 -17.05 2.04711e-05 688 21 7 38 [+] picture button
LOC533098 ENSBTAT00000013595 AP1 subunit gamma-binding protein 1 (Gamma-synergin). [Source:Uniprot/SWISSPROT;Acc:Q9UMZ2]AP1 subunit gamma-binding protein 1 (Gamma-synergin). [Source:Uniprot/SWISSPROT;Acc:Q9UMZ2] BY ORTHOLOGY TO:ENSXETT00000017519
16.4374 -12.64 2.2049e-05 558 16 6 32 [+] picture button
LOC521918 ENSBTAT00000013804 SPT3-associated factor 42 [Source:RefSeq_peptide;Acc:NP_444281]SPT3-associated factor 42 [Source:RefSeq_peptide;Acc:NP_444281] BY ORTHOLOGY TO:ENST00000367874
16.7806 -19.48 2.29366e-05 529 13 8 26 [+] picture button

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Download table: GFF TXT
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