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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Bos taurus and bta-miR-139

938 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC536636 ENSBTAT00000043118 cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A). [Source:Uniprot/SWISSPROT;Acc:Q14432]cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A). [Source:Uniprot/SWISSPROT;Acc:Q14432] BY ORTHOLOGY TO:ENST00000359062
17.0338 -24.83 4.15124e-12 600 20 11 35 [+] picture button
LOC616399 ENSBTAT00000044692 CG4547-PA [Source:RefSeq_peptide;Acc:NP_572356]CG4547-PA [Source:RefSeq_peptide;Acc:NP_572356] BY ORTHOLOGY TO:CG4547-RA
18.4404 -20.66 1.64926e-10 196 9 9 32 [+] picture button
Q17QY4_BOVIN ENSBTAT00000015961 LOC512222 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q17QY4]
17.1949 -19.36 3.19542e-09 600 11 4 18 [+] picture button
LOC789183 ENSBTAT00000027897 Protein FAM38A. [Source:Uniprot/SWISSPROT;Acc:Q92508]Protein FAM38A. [Source:Uniprot/SWISSPROT;Acc:Q92508] BY ORTHOLOGY TO:ENSORLT00000000496
18.2142 -19.93 4.14195e-09 159 7 10 34 [+] picture button
H2AV_BOVIN ENSBTAT00000022576 Histone H2AV (H2A.F/Z). [Source:Uniprot/SWISSPROT;Acc:Q32LA7]
17.3091 -19.13 3.50578e-07 259 13 8 45 [+] picture button
LSM1_BOVIN ENSBTAT00000002113 U6 snRNA-associated Sm-like protein LSm1. [Source:Uniprot/SWISSPROT;Acc:Q5E9Z8]
15.7291 -16.22 6.31414e-07 350 14 5 35 [+] picture button
LOC539904 ENSBTAT00000022119 ring finger and KH domain containing 3 [Source:MarkerSymbol;Acc:MGI:1918252]ring finger and KH domain containing 3 [Source:MarkerSymbol;Acc:MGI:1918252] BY ORTHOLOGY TO:ENSRNOT00000039748
16.6958 -16.32 7.81752e-07 600 17 9 31 [+] picture button
Q4F6X5_BOVIN ENSBTAT00000046127 Caspase recruitment domain protein 4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q4F6X5]
16.2603 -17.52 2.33713e-06 600 23 4 34 [+] picture button
CAV3_BOVIN ENSBTAT00000030791 Caveolin-3. [Source:Uniprot/SWISSPROT;Acc:Q2KI43]
16.7145 -16.26 2.50694e-06 387 14 7 39 [+] picture button
UBE2F_BOVIN ENSBTAT00000037020 NEDD8-conjugating enzyme UBE2F (EC 6.3.2.-) (Ubiquitin-conjugating enzyme E2 F) (NEDD8 protein ligase UBE2F) (NEDD8 carrier protein UBE2F). [Source:Uniprot/SWISSPROT;Acc:Q1RMW1]
17.8344 -19.68 2.92727e-06 671 14 3 19 [+] picture button
LOC519874 ENSBTAT00000003249 CG8873-PA [Source:RefSeq_peptide;Acc:NP_608880]CG8873-PA [Source:RefSeq_peptide;Acc:NP_608880] BY ORTHOLOGY TO:CG8873-RA
16.9697 -18 5.02498e-06 140 7 7 22 [+] picture button
NP_001015623.1 ENSBTAT00000026711 MON1 homolog A [Source:RefSeq_peptide;Acc:NP_001015623]
15.7253 -19.97 5.72699e-06 158 9 5 44 [+] picture button
NP_001029462.1 ENSBTAT00000033040 hypothetical protein LOC507309 [Source:RefSeq_peptide;Acc:NP_001029462]
16.1778 -14.97 6.58473e-06 297 14 8 53 [+] picture button
BTAF1 ENSBTAT00000021438 TATA-binding protein-associated factor 172 (EC 3.6.1.-) (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B- TFIID transcription factor-associated 170 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O14981]
16.4019 -16.37 7.16938e-06 443 12 9 34 [+] picture button
LOC507880 ENSBTAT00000000099 SEC31 homolog B [Source:RefSeq_peptide;Acc:NP_056305]SEC31 homolog B [Source:RefSeq_peptide;Acc:NP_056305] BY ORTHOLOGY TO:SINFRUT00000180169
16.9489 -19.95 7.99478e-06 362 16 5 44 [+] picture button
NP_001030201.1 ENSBTAT00000001054 mitochondrial ribosomal protein L9 [Source:RefSeq_peptide;Acc:NP_001030201]
16.2068 -18.66 8.73979e-06 402 13 5 26 [+] picture button
RAB11FIP5 ENSBTAT00000008106 Rab11 family-interacting protein 5 (Rab11-FIP5) (Rab11-interacting protein Rip11) (Gamma-SNAP-associated factor 1) (Gaf-1) (Phosphoprotein pp75). [Source:Uniprot/SWISSPROT;Acc:Q9BXF6]
16.2293 -25.63 9.80082e-06 449 17 4 32 [+] picture button
LOC510529 ENSBTAT00000001130 U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog). [Source:Uniprot/SWISSPROT;Acc:O75643]U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-) (U5 snRNP-specific 200 kDa protein) (U5-200KD) (Activating signal cointegrator 1 complex subunit 3-like 1) (BRR2 homolog). [Source:Uniprot/SWISSPROT;Acc:O75643] BY ORTHOLOGY TO:ENSXETT00000002684
15.6121 -21.1 1.01185e-05 232 11 5 46 [+] picture button
XR_027792.1 ENSBTAT00000014505 PREDICTED: Bos taurus similar to Ubiquitin carboxyl-terminal hydrolase 47 (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47) (LOC511121), mRNA. [Source:RefSeq_dna;Acc:XR_027792]
16.8447 -18.46 1.08783e-05 600 16 10 29 [+] picture button
DPY30_BOVIN ENSBTAT00000012183 Dpy-30-like protein. [Source:Uniprot/SWISSPROT;Acc:Q2NKU6]
16.9697 -15.12 1.76569e-05 205 8 9 18 [+] picture button
LOC785612 ENSBTAT00000018145 general transcription factor II A, 1 [Source:MarkerSymbol;Acc:MGI:1933277]general transcription factor II A, 1 [Source:MarkerSymbol;Acc:MGI:1933277] BY ORTHOLOGY TO:ENSMUST00000021345
17.0866 -24 1.98012e-05 600 16 5 31 [+] picture button
LOC535458 ENSBTAT00000018541 Polypeptide N-acetylgalactosaminyltransferase 3 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 3) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 3) (Polypeptide GalNAc transferase 3) (GalNAc-T3) (pp-GaNTase 3). [Source:Uniprot/SWISSPROT;Acc:Q14435]Polypeptide N-acetylgalactosaminyltransferase 3 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 3) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 3) (Polypeptide GalNAc transferase 3) (GalNAc-T3) (pp-GaNTase 3). [Source:Uniprot/SWISSPROT;Acc:Q14435] BY ORTHOLOGY TO:SINFRUT00000148328
16.7916 -21.77 2.03016e-05 471 17 7 37 [+] picture button
LOC520912 ENSBTAT00000006599 lysocardiolipin acyltransferase isoform 1 [Source:RefSeq_peptide;Acc:NP_872357]lysocardiolipin acyltransferase isoform 1 [Source:RefSeq_peptide;Acc:NP_872357] BY ORTHOLOGY TO:ENSOANT00000013098
16.4147 -22.04 2.12706e-05 600 14 7 31 [+] picture button
NUCG_BOVIN ENSBTAT00000016564 Endonuclease G, mitochondrial precursor (EC 3.1.30.-) (Endo G). [Source:Uniprot/SWISSPROT;Acc:P38447]
15.9515 -16.24 2.47985e-05 63 2 3 7 [+] picture button
NP_001069037.1 ENSBTAT00000009501 hypothetical protein LOC512589 [Source:RefSeq_peptide;Acc:NP_001069037]
15.9218 -19.53 2.74039e-05 305 17 6 44 [+] picture button
LOC508353 ENSBTAT00000009987 hypothetical protein LOC393763 [Source:RefSeq_peptide;Acc:NP_957084]hypothetical protein LOC393763 [Source:RefSeq_peptide;Acc:NP_957084] BY ORTHOLOGY TO:ENSDART00000010271
18.4865 -21.75 3.21513e-05 327 13 4 28 [+] picture button
NP_001035681.1 ENSBTAT00000027212 adaptor-related protein complex 1, sigma 1 subunit [Source:RefSeq_peptide;Acc:NP_001035681]
15.8914 -20.14 3.3744e-05 600 18 6 30 [+] picture button
LOC789410 ENSBTAT00000043719 X-ray repair complementing defective repair in Chinese hamster cells 2 [Source:MarkerSymbol;Acc:MGI:1927345]X-ray repair complementing defective repair in Chinese hamster cells 2 [Source:MarkerSymbol;Acc:MGI:1927345] BY ORTHOLOGY TO:ENSMUST00000030773
16.1554 -23.63 3.73366e-05 600 18 2 24 [+] picture button
CASP9 ENSBTAT00000003205 Caspase-9 precursor (EC 3.4.22.62) (CASP-9) (ICE-like apoptotic protease 6) (ICE-LAP6) (Apoptotic protease Mch-6) (Apoptotic protease- activating factor 3) (APAF-3) [Contains: Caspase-9 subunit p35; Caspase-9 subunit p10]. [Source:Uniprot/SWISSPROT;Acc:P55211]
16.6799 -30.69 4.0371e-05 600 13 3 23 [+] picture button
LOC522518 ENSBTAT00000024789 CWF19-like 2, cell cycle control [Source:RefSeq_peptide;Acc:NP_689647]CWF19-like 2, cell cycle control [Source:RefSeq_peptide;Acc:NP_689647] BY ORTHOLOGY TO:ENSGALT00000027735
16.0738 -21.97 4.2103e-05 543 15 2 28 [+] picture button
ZNF291 ENSBTAT00000046397 Zinc finger protein 291. [Source:Uniprot/SWISSPROT;Acc:Q9BY12]
16.2794 -11.93 4.53329e-05 321 13 7 45 [+] picture button
Q3MIB9_BOVIN ENSBTAT00000039259 LOC510050 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3MIB9]
17.4721 -15.35 4.54263e-05 432 11 7 42 [+] picture button
CA052_BOVIN ENSBTAT00000021717 Uncharacterized protein C1orf52 homolog. [Source:Uniprot/SWISSPROT;Acc:Q32LF5]
17.7616 -18.23 4.63214e-05 191 9 5 17 [+] picture button
UCRQ_BOVIN ENSBTAT00000043276 Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (EC 1.10.2.2) (Ubiquinol-cytochrome c reductase complex 9.5 kDa protein) (Complex III subunit VII). [Source:Uniprot/SWISSPROT;Acc:P13271]
17.3249 -22.17 4.72663e-05 334 18 4 43 [+] picture button
NP_001033124.1 ENSBTAT00000013993 hypothetical protein LOC505415 [Source:RefSeq_peptide;Acc:NP_001033124]
17.102 -24.65 5.00278e-05 1167 8 6 13 [+] picture button
NP_001039437.1 ENSBTAT00000036390 hypothetical protein LOC507517 [Source:RefSeq_peptide;Acc:NP_001039437]
16.0018 -18.53 5.51379e-05 745 13 2 19 [+] picture button
NP_803486.1 ENSBTAT00000013715 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_803486]
16.3989 -17.71 5.81801e-05 600 15 8 38 [+] picture button
LOC504258 ENSBTAT00000004195 sialic acid binding Ig-like lectin G [Source:MarkerSymbol;Acc:MGI:2443630]sialic acid binding Ig-like lectin G [Source:MarkerSymbol;Acc:MGI:2443630] BY ORTHOLOGY TO:ENSMUST00000005592
18.4062 -20.51 6.67757e-05 322 13 1 24 [+] picture button
RT28_BOVIN ENSBTAT00000001718 Mitochondrial 28S ribosomal protein S28 (S28mt) (MRP-S28) (MRP-S35). [Source:Uniprot/SWISSPROT;Acc:P82928]
16.5172 -13.32 6.81049e-05 251 12 3 30 [+] picture button
BDH2_BOVIN ENSBTAT00000003277 3-hydroxybutyrate dehydrogenase type 2 (EC 1.1.1.30) (R-beta- hydroxybutyrate dehydrogenase) (Dehydrogenase/reductase SDR family member 6). [Source:Uniprot/SWISSPROT;Acc:Q3T046]
16.4041 -15.31 6.99364e-05 284 14 3 30 [+] picture button
NEC2_BOVIN ENSBTAT00000011451 Neuroendocrine convertase 2 precursor (EC 3.4.21.94) (NEC 2) (PC2) (Prohormone convertase 2) (Proprotein convertase 2). [Source:Uniprot/SWISSPROT;Acc:Q9GLR0]
15.8151 -21.16 7.5634e-05 600 11 2 11 [+] picture button
LOC615096 ENSBTAT00000024325 TATA box binding protein like 2 [Source:MarkerSymbol;Acc:MGI:2684058]TATA box binding protein like 2 [Source:MarkerSymbol;Acc:MGI:2684058] BY ORTHOLOGY TO:ENSMUST00000080453
16.8509 -14.19 7.57788e-05 600 16 5 28 [+] picture button
LOC510809 ENSBTAT00000022106 Uncharacterized protein C21orf45 (FAPP1-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9NYP9]Uncharacterized protein C21orf45 (FAPP1-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9NYP9] BY ORTHOLOGY TO:ENSGACT00000027265
16.7848 -27.39 7.65976e-05 600 17 2 26 [+] picture button
LOC617879 ENSBTAT00000007271 Gastric inhibitory polypeptide receptor precursor (GIP-R) (Glucose- dependent insulinotropic polypeptide receptor). [Source:Uniprot/SWISSPROT;Acc:P48546]Gastric inhibitory polypeptide receptor precursor (GIP-R) (Glucose- dependent insulinotropic polypeptide receptor). [Source:Uniprot/SWISSPROT;Acc:P48546] BY ORTHOLOGY TO:ENSPTRT00000020746
15.8407 -18.69 8.11783e-05 600 14 2 19 [+] picture button
LOC510874 ENSBTAT00000002336 F-box only protein 17 (F-box only protein 26). [Source:Uniprot/SWISSPROT;Acc:Q96EF6]F-box only protein 17 (F-box only protein 26). [Source:Uniprot/SWISSPROT;Acc:Q96EF6] BY ORTHOLOGY TO:ENSPTRT00000020296
16.575 -16.92 8.21174e-05 600 19 4 29 [+] picture button
GBA2 ENSBTAT00000015194 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q9HCG7]
17.6026 -20.03 8.78444e-05 307 17 8 41 [+] picture button
PFDN6 ENSBTAT00000021193 Prefoldin subunit 6 (Protein Ke2). [Source:Uniprot/SWISSPROT;Acc:O15212]
16.2013 -14.57 9.06953e-05 600 12 2 18 [+] picture button
LOC511484 ENSBTAT00000018238 zinc finger, FYVE domain containing 20 [Source:MarkerSymbol;Acc:MGI:1925537]zinc finger, FYVE domain containing 20 [Source:MarkerSymbol;Acc:MGI:1925537] BY ORTHOLOGY TO:ENSMUST00000014694
16.7034 -26.63 9.35336e-05 600 16 5 26 [+] picture button
XR_027428.1 ENSBTAT00000003097 PREDICTED: Bos taurus similar to ankyrin 2 (LOC539238), mRNA. [Source:RefSeq_dna;Acc:XR_027428]
17.4127 -28.95 9.433e-05 646 12 3 23 [+] picture button
LOC783694 ENSBTAT00000027151 WD repeat domain 35 [Source:MarkerSymbol;Acc:MGI:1921932]WD repeat domain 35 [Source:MarkerSymbol;Acc:MGI:1921932] BY ORTHOLOGY TO:ENSMUST00000085745
19.1192 -19.75 0.000100372 600 12 2 29 [+] picture button

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Download table: GFF TXT
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