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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Bos taurus and bta-miR-124a

818 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC506384 ENSBTAT00000016388 Poly [ADP-ribose] polymerase 16 (EC 2.4.2.30) (PARP-16). [Source:Uniprot/SWISSPROT;Acc:Q8N5Y8]Poly [ADP-ribose] polymerase 16 (EC 2.4.2.30) (PARP-16). [Source:Uniprot/SWISSPROT;Acc:Q8N5Y8] BY ORTHOLOGY TO:ENSGACT00000008368
17.3093 -19.74 4.38369e-11 600 14 7 22 [+] picture button
LOC790217 ENSBTAT00000001976 SH3 domain containing ring finger 1 [Source:RefSeq_peptide;Acc:NP_065921]SH3 domain containing ring finger 1 [Source:RefSeq_peptide;Acc:NP_065921] BY ORTHOLOGY TO:ENST00000284637
16.575 -21.62 1.38591e-10 600 12 9 16 [+] picture button
VA0E1_BOVIN ENSBTAT00000020094 Vacuolar ATP synthase subunit e1 (EC 3.6.3.14) (V-ATPase subunit e1) (Vacuolar proton pump subunit e1) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein). [Source:Uniprot/SWISSPROT;Acc:P81103]
16.9238 -25.15 2.46128e-10 523 18 6 31 [+] picture button
NP_001033637.1 ENSBTAT00000020252 hypothetical protein LOC515902 [Source:RefSeq_peptide;Acc:NP_001033637]
17.2031 -16.77 2.95797e-09 500 14 4 30 [+] picture button
NP_001069323.1 ENSBTAT00000007633 hypothetical protein LOC524246 [Source:RefSeq_peptide;Acc:NP_001069323]
16.1548 -13.69 3.2721e-09 423 15 6 30 [+] picture button
XR_027938.1 ENSBTAT00000004011 PREDICTED: Bos taurus similar to Recombination activating gene 1 activating protein 1 (LOC520463), mRNA. [Source:RefSeq_dna;Acc:XR_027938]
16.9008 -15.92 3.67381e-09 600 12 7 19 [+] picture button
LOC540283 ENSBTAT00000005398 Coproporphyrinogen III oxidase, mitochondrial precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) (COX). [Source:Uniprot/SWISSPROT;Acc:P36551]Coproporphyrinogen III oxidase, mitochondrial precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) (COX). [Source:Uniprot/SWISSPROT;Acc:P36551] BY ORTHOLOGY TO:ENSMODT00000021666
16.2684 -20.63 4.59583e-09 635 20 3 25 [+] picture button
LOC781353 ENSBTAT00000022607 receptor-like tyrosine kinase [Source:MarkerSymbol;Acc:MGI:101766]receptor-like tyrosine kinase [Source:MarkerSymbol;Acc:MGI:101766] BY ORTHOLOGY TO:ENSMUST00000035142
17.2812 -20.47 7.98168e-09 397 15 7 31 [+] picture button
THIM_BOVIN ENSBTAT00000003716 3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) (Beta- ketothiolase) (Acetyl-CoA acyltransferase) (Mitochondrial 3-oxoacyl- CoA thiolase). [Source:Uniprot/SWISSPROT;Acc:Q3T0R7]
15.7358 -14.26 8.94639e-09 600 10 6 19 [+] picture button
LOC537341 ENSBTAT00000011602 Polypyrimidine tract-binding protein 2 (Neurally-enriched homolog of PTB) (Neural polypyrimidine tract-binding protein) (PTB-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA9]Polypyrimidine tract-binding protein 2 (Neurally-enriched homolog of PTB) (Neural polypyrimidine tract-binding protein) (PTB-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA9] BY ORTHOLOGY TO:SINFRUT00000135646
17.3659 -20.13 1.0503e-08 511 14 7 31 [+] picture button
MEPD_BOVIN ENSBTAT00000027246 Thimet oligopeptidase (EC 3.4.24.15). [Source:Uniprot/SWISSPROT;Acc:Q1JPJ8]
17.0259 -18.27 1.06172e-08 309 17 7 61 [+] picture button
LOC535018 ENSBTAT00000005936 CG18596-PA [Source:RefSeq_peptide;Acc:NP_651031]CG18596-PA [Source:RefSeq_peptide;Acc:NP_651031] BY ORTHOLOGY TO:CG18596-RA
19.2323 -19.99 4.00784e-08 240 8 6 32 [+] picture button
LOC525109 ENSBTAT00000025779 Potassium channel subfamily K member 10 (Outward rectifying potassium channel protein TREK-2) (TREK-2 K(+) channel subunit). [Source:Uniprot/SWISSPROT;Acc:P57789]Potassium channel subfamily K member 10 (Outward rectifying potassium channel protein TREK-2) (TREK-2 K(+) channel subunit). [Source:Uniprot/SWISSPROT;Acc:P57789] BY ORTHOLOGY TO:ENSORLT00000016216
16.4701 -20.67 4.14789e-08 600 17 9 27 [+] picture button
LOC517031 ENSBTAT00000003035 ADP-ribosylation factor-binding protein GGA2 (Golgi-localized, gamma ear-containing, ARF-binding protein 2) (Gamma-adaptin-related protein 2) (VHS domain and ear domain of gamma-adaptin) (Vear). [Source:Uniprot/SWISSPROT;Acc:Q9UJY4]ADP-ribosylation factor-binding protein GGA2 (Golgi-localized, gamma ear-containing, ARF-binding protein 2) (Gamma-adaptin-related protein 2) (VHS domain and ear domain of gamma-adaptin) (Vear). [Source:Uniprot/SWISSPROT;Acc:Q9UJY4] BY ORTHOLOGY TO:ENSPTRT00000014533
16.9969 -22.37 5.94652e-08 600 23 5 41 [+] picture button
TMEM112B ENSBTAT00000023837 transmembrane protein 112B (TMEM112B), mRNA [Source:RefSeq_dna;Acc:NM_033200]
16.5808 -29.23 8.26405e-08 563 17 6 30 [+] picture button
ITFG3_BOVIN ENSBTAT00000022045 Protein ITFG3. [Source:Uniprot/SWISSPROT;Acc:Q2HJE5]
15.9689 -26 1.12162e-07 714 17 4 20 [+] picture button
NP_001029586.1 ENSBTAT00000011048 hypothetical protein LOC511925 [Source:RefSeq_peptide;Acc:NP_001029586]
17.7616 -21.63 1.30021e-07 143 6 9 13 [+] picture button
LOC538899 ENSBTAT00000003187 Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-) (GDP- Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q9H553]Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-) (GDP- Man:Man(1)GlcNAc(2)-PP-dolichol mannosyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q9H553] BY ORTHOLOGY TO:ENSGACT00000011929
16.885 -17.16 1.64478e-07 600 14 4 21 [+] picture button
NP_001039470.1 ENSBTAT00000029870 hypothetical protein LOC508493 [Source:RefSeq_peptide;Acc:NP_001039470]
16.9761 -22.53 3.15909e-07 479 18 6 34 [+] picture button
NP_001030510.1 ENSBTAT00000003719 ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:RefSeq_peptide;Acc:NP_001030510]
16.9697 -12.85 3.28831e-07 272 11 7 32 [+] picture button
NP_001070351.1 ENSBTAT00000002867 hypothetical protein LOC530101 [Source:RefSeq_peptide;Acc:NP_001070351]
16.3577 -17.59 3.40624e-07 327 12 9 38 [+] picture button
ENSBTAT00000015589 Sodium/bile acid cotransporter 7 (Na(+)/bile acid cotransporter 7) (Solute carrier family 10 member 7). [Source:Uniprot/SWISSPROT;Acc:Q0GE19]
15.7358 -16.19 5.06258e-07 600 14 5 21 [+] picture button
LOC539495 ENSBTAT00000018737 Uncharacterized protein C14orf135 precursor (Hepatitis C virus F protein-binding protein 2) (HCV F protein-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q63HM2]Uncharacterized protein C14orf135 precursor (Hepatitis C virus F protein-binding protein 2) (HCV F protein-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q63HM2] BY ORTHOLOGY TO:ENSGACT00000011129
16.1094 -12.6 7.87727e-07 481 19 6 30 [+] picture button
LOC505750 ENSBTAT00000030750 Leucine-rich repeats and immunoglobulin-like domains protein 1 precursor (LIG-1). [Source:Uniprot/SWISSPROT;Acc:Q96JA1]Leucine-rich repeats and immunoglobulin-like domains protein 1 precursor (LIG-1). [Source:Uniprot/SWISSPROT;Acc:Q96JA1] BY ORTHOLOGY TO:SINFRUT00000132578
17.5042 -21.58 8.55003e-07 400 16 6 27 [+] picture button
LOC506979 ENSBTAT00000025324 ham-1 encodes a novel protein with a winged helix DNA-binding motif. ham-1 is required for the asymmetric divisions of several neuroblasts in the developing embryo and may influence their spindle position. ham-1 mutations also exhibit HSN motor neuron migration defects. HAM-1 interacts with itself in a yeast two-hybrid screen and observations suggest that its multimerization is required for its proper localization. HAM-1 is cytoplasmic and is asymmetrically distributed to the posterior of the HSNPHB neuroblast. [Source: WormBase]ham-1 encodes a novel protein with a winged helix DNA-binding motif. ham-1 is required for the asymmetric divisions of several neuroblasts in the developing embryo and may influence their spindle position. ham-1 mutations also exhibit HSN motor neuron migration defects. HAM-1 interacts with itself in a yeast two-hybrid screen and observations suggest that its multimerization is required for its proper localization. HAM-1 is cytoplasmic and is asymmetrically distributed to the posterior of the HSNPHB neuroblast. [Source: WormBase] BY ORTHOLOGY TO:F53B2.6
16.4507 -15.38 9.19878e-07 600 18 3 26 [+] picture button
NP_001039759.1 ENSBTAT00000013522 dehydrogenase/reductase (SDR family) member 1 [Source:RefSeq_peptide;Acc:NP_001039759]
18.6667 -15.26 1.24363e-06 257 13 5 40 [+] picture button
ENSBTAT00000047753 Polypeptide N-acetylgalactosaminyltransferase 12 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 12) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 12) (Polypeptide GalNAc transferase 12) (GalNAc-T12) (pp-GaNTase 12). [Source:Uniprot/SWISSPROT;Acc:Q8IXK2] [from human gene ENSG00000119514]Polypeptide N-acetylgalactosaminyltransferase 12 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 12) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 12) (Polypeptide GalNAc transferase 12) (GalNAc-T12) (pp-GaNTase 12). [Source:Uniprot/SWISSPROT;Acc:Q8IXK2] [from human gene ENSG00000119514] BY ORTHOLOGY TO:ENSXETT00000013615
16.0528 -14.63 1.84667e-06 600 18 3 33 [+] picture button
ANXA7_BOVIN ENSBTAT00000026926 Annexin A7 (Annexin VII) (Synexin) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P20072]
16.7689 -16.81 1.90584e-06 354 18 6 41 [+] picture button
NP_001039404.1 ENSBTAT00000045996 hypothetical protein LOC506310 [Source:RefSeq_peptide;Acc:NP_001039404]
16.3686 -24.12 1.96436e-06 469 18 6 39 [+] picture button
NP_001068692.1 ENSBTAT00000027570 hypothetical protein LOC505818 [Source:RefSeq_peptide;Acc:NP_001068692]
16.0956 -13.01 1.96945e-06 549 11 4 18 [+] picture button
GRIA4 ENSBTAT00000033033 Glutamate receptor 4 precursor (GluR-4) (GluR4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (AMPA-selective glutamate receptor 4). [Source:Uniprot/SWISSPROT;Acc:P48058]Glutamate receptor 4 precursor (GluR-4) (GluR4) (GluR-D) (Glutamate receptor ionotropic, AMPA 4) (AMPA-selective glutamate receptor 4). [Source:Uniprot/SWISSPROT;Acc:P48058] BY ORTHOLOGY TO:ENSMMUT00000015367
17.4891 -17.18 1.97168e-06 600 12 9 20 [+] picture button
IQGAP2 ENSBTAT00000001190 Ras GTPase-activating-like protein IQGAP2. [Source:Uniprot/SWISSPROT;Acc:Q13576]
15.9515 -19.29 1.99535e-06 193 8 7 22 [+] picture button
A0JNQ0_BOVIN ENSBTAT00000029187 C9orf58 protein. [Source:Uniprot/SPTREMBL;Acc:A0JNQ0]
16.0505 -14.46 2.20892e-06 600 16 3 20 [+] picture button
NP_001069789.1 ENSBTAT00000006271 hypothetical protein LOC614283 [Source:RefSeq_peptide;Acc:NP_001069789]
15.9205 -13.36 2.51886e-06 600 16 8 23 [+] picture button
HIC1 ENSBTAT00000035163 Hypermethylated in cancer 1 protein (Hic-1) (Zinc finger and BTB domain-containing protein 29). [Source:Uniprot/SWISSPROT;Acc:Q14526]
17.2572 -28.14 2.8126e-06 600 16 7 32 [+] picture button
Q05B54_BOVIN ENSBTAT00000006284 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q05B54]
16.575 -17.61 3.12594e-06 600 15 4 25 [+] picture button
LOC615476 ENSBTAT00000018351 Kelch-like protein 17 (Actinfilin). [Source:Uniprot/SWISSPROT;Acc:Q6TDP4]Kelch-like protein 17 (Actinfilin). [Source:Uniprot/SWISSPROT;Acc:Q6TDP4] BY ORTHOLOGY TO:ENSGALT00000003442
17.6241 -28.29 3.93824e-06 600 19 3 32 [+] picture button
LOC783763 ENSBTAT00000014582 LIM/homeobox protein Lhx2 (Homeobox protein LH-2). [Source:Uniprot/SWISSPROT;Acc:P50458]LIM/homeobox protein Lhx2 (Homeobox protein LH-2). [Source:Uniprot/SWISSPROT;Acc:P50458] BY ORTHOLOGY TO:ENSGALT00000034919
17.8494 -22.15 4.11116e-06 415 13 10 32 [+] picture button
UBP14_BOVIN ENSBTAT00000025580 Ubiquitin carboxyl-terminal hydrolase 14 (EC 3.1.2.15) (Ubiquitin thioesterase 14) (Ubiquitin-specific-processing protease 14) (Deubiquitinating enzyme 14). [Source:Uniprot/SWISSPROT;Acc:Q0IIF7]
16.2603 -13.62 4.2067e-06 600 20 8 32 [+] picture button
NP_001039796.1 ENSBTAT00000017106 hypothetical protein LOC532685 [Source:RefSeq_peptide;Acc:NP_001039796]
17.3648 -18.88 4.55244e-06 600 12 4 18 [+] picture button
NP_001069793.1 ENSBTAT00000016245 hypothetical protein LOC614408 [Source:RefSeq_peptide;Acc:NP_001069793]
16.353 -13.53 4.82446e-06 503 18 7 33 [+] picture button
NP_001015524.1 ENSBTAT00000003186 activating signal cointegrator 1 complex subunit 2 [Source:RefSeq_peptide;Acc:NP_001015524]
16.9541 -21.6 4.90497e-06 361 16 5 36 [+] picture button
Q0KIZ6_BOVIN ENSBTAT00000026300 CD276 antigen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0KIZ6]
16.9882 -18.01 4.94691e-06 423 17 4 33 [+] picture button
NP_001035608.1 ENSBTAT00000010064 TM2 domain containing 3 [Source:RefSeq_peptide;Acc:NP_001035608]
15.9766 -15.95 5.24239e-06 600 15 5 28 [+] picture button
LOC617368 ENSBTAT00000016423 enoyl Coenzyme A hydratase domain containing 3 [Source:RefSeq_peptide;Acc:NP_078969]enoyl Coenzyme A hydratase domain containing 3 [Source:RefSeq_peptide;Acc:NP_078969] BY ORTHOLOGY TO:ENSOANT00000024275
16.1778 -22.49 5.75389e-06 109 5 4 13 [+] picture button
NP_001070433.1 ENSBTAT00000010620 solute carrier family 35, member B2 [Source:RefSeq_peptide;Acc:NP_001070433]
17.2204 -22.13 6.32095e-06 893 15 3 19 [+] picture button
LOC505220 ENSBTAT00000022588 Tyrosine-protein phosphatase non-receptor type 9 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG2) (PTPase-MEG2). [Source:Uniprot/SWISSPROT;Acc:P43378]Tyrosine-protein phosphatase non-receptor type 9 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG2) (PTPase-MEG2). [Source:Uniprot/SWISSPROT;Acc:P43378] BY ORTHOLOGY TO:SINFRUT00000163968
17.5354 -17.93 7.39096e-06 269 15 9 44 [+] picture button
FLOT1_BOVIN ENSBTAT00000013135 Flotillin-1. [Source:Uniprot/SWISSPROT;Acc:Q08DN8]
17.6391 -17.84 7.79829e-06 319 14 7 29 [+] picture button
MGC155214 ENSBTAT00000018609 Torsin-3A precursor (Torsin family 3 member A) (ATP-dependent interferon-responsive protein). [Source:Uniprot/SWISSPROT;Acc:Q9H497]Torsin-3A precursor (Torsin family 3 member A) (ATP-dependent interferon-responsive protein). [Source:Uniprot/SWISSPROT;Acc:Q9H497] BY ORTHOLOGY TO:ENSGALT00000006703
17.445 -20.57 8.04966e-06 590 13 6 23 [+] picture button
NP_001069733.1 ENSBTAT00000007009 hypothetical protein LOC541255 [Source:RefSeq_peptide;Acc:NP_001069733]
19.2323 -18.12 8.85139e-06 296 17 4 43 [+] picture button

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Download table: GFF TXT
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