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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and xtr-miR-191

753 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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AMMECR1 ENSGACT00000026863 AMME syndrome candidate gene 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y4X0]
15.8417 -13.11 2.28543e-07 500 4 10 7 [+] picture button
DDX46 ENSGACT00000000220 Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD box protein 46) (PRP5 homolog). [Source:Uniprot/SWISSPROT;Acc:Q7L014]
16.487 -10.81 3.51326e-07 280 7 3 12 [+] picture button
RNF139 ENSGACT00000012629 RING finger protein 139 (Translocation in renal carcinoma on chromosome 8). [Source:Uniprot/SWISSPROT;Acc:Q8WU17]
16.683 -11.82 4.70352e-07 500 4 1 5 [+] picture button
RCC2 ENSGACT00000017606 Protein RCC2 (Telophase disk protein of 60 kDa) (RCC1-like protein TD- 60). [Source:Uniprot/SWISSPROT;Acc:Q9P258]
15.9043 -15.64 2.58106e-06 500 4 2 7 [+] picture button
TMOD1 ENSGACT00000024634 Tropomodulin-1 (Erythrocyte tropomodulin) (E-Tmod). [Source:Uniprot/SWISSPROT;Acc:P28289]
15.4745 -13.36 8.54289e-06 500 6 3 9 [+] picture button
ANP32B ENSGACT00000022998 Acidic leucine-rich nuclear phosphoprotein 32 family member B (PHAPI2 protein) (Silver-stainable protein SSP29) (Acidic protein rich in leucines). [Source:Uniprot/SWISSPROT;Acc:Q92688]
16.4098 -16.55 9.41706e-06 500 6 3 7 [+] picture button
LBXCOR1 (2 of 2) ENSGACT00000006846 Ladybird homeobox corepressor 1. [Source:Uniprot/SWISSPROT;Acc:P84550]
15.9247 -12.88 1.14166e-05 500 5 8 15 [+] picture button
LSM2 ENSGACT00000005045 U6 snRNA-associated Sm-like protein LSm2 (snRNP core Sm-like protein Sm-x5) (Small nuclear ribonuclear protein D homolog) (Protein G7b). [Source:Uniprot/SWISSPROT;Acc:Q9Y333]
17.1937 -16.06 1.16885e-05 563 3 1 5 [+] picture button
CORO2A (1 of 2) ENSGACT00000022996 Coronin-2A (WD repeat-containing protein 2) (IR10). [Source:Uniprot/SWISSPROT;Acc:Q92828]
15.5819 -14.87 2.50382e-05 500 7 2 10 [+] picture button
PCYT1A ENSGACT00000020406 Choline-phosphate cytidylyltransferase A (EC 2.7.7.15) (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha). [Source:Uniprot/SWISSPROT;Acc:P49585]
16.1459 -8.35 2.79562e-05 126 2 1 4 [+] picture button
XRCC6 ENSGACT00000006472 ATP-dependent DNA helicase 2 subunit 1 (ATP-dependent DNA helicase II 70 kDa subunit) (Lupus Ku autoantigen protein p70) (Ku70) (70 kDa subunit of Ku antigen) (Thyroid-lupus autoantigen) (TLAA) (CTC box- binding factor 75 kDa subunit) (CTCBF) (CTC75) (DNA [Source:Uniprot/SWISSPROT;Acc:P12956]
15.3372 -11.59 2.82806e-05 500 8 2 11 [+] picture button
KIAA1609 ENSGACT00000000613 KIAA1609 (KIAA1609), mRNA [Source:RefSeq_dna;Acc:NM_020947]
15.691 -20.75 3.07863e-05 500 6 1 8 [+] picture button
ZC3H11A ENSGACT00000015281 Zinc finger CCCH domain-containing protein 11A. [Source:Uniprot/SWISSPROT;Acc:O75152]
16.5491 -15.26 3.24133e-05 500 6 1 7 [+] picture button
SKAP2 ENSGACT00000011024 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (Src-associated adapter protein with PH and SH3 domains) (Pyk2/RAFTK-associa [Source:Uniprot/SWISSPROT;Acc:O75563]
16.764 -18.67 3.87659e-05 500 7 2 10 [+] picture button
ACAD9 ENSGACT00000014725 Acyl-CoA dehydrogenase family member 9, mitochondrial precursor (EC 1.3.99.-) (ACAD-9). [Source:Uniprot/SWISSPROT;Acc:Q9H845]
17.8514 -13.37 4.82113e-05 91 1 1 2 [+] picture button
PLEKHB2 ENSGACT00000014629 Pleckstrin homology domain-containing family B member 2 (Evectin-2). [Source:Uniprot/SWISSPROT;Acc:Q96CS7]
15.6366 -11.03 4.83939e-05 500 2 2 7 [+] picture button
POLR3B ENSGACT00000015670 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (EC 2.7.7.6) (RNA polymerase III subunit 2) (RPC2). [Source:Uniprot/SWISSPROT;Acc:Q9NW08]
16.0322 -13.94 4.96901e-05 191 5 2 15 [+] picture button
C1orf160 (2 of 2) ENSGACT00000009527 Uncharacterized protein C1orf160. [Source:Uniprot/SWISSPROT;Acc:Q9H0R3]
15.7804 -16.77 5.49112e-05 324 10 3 16 [+] picture button
C8orf55 (2 of 2) ENSGACT00000022760 mesenchymal stem cell protein DSCD75 [Source:RefSeq_peptide;Acc:NP_057731]
15.3499 -12.06 5.50465e-05 216 5 2 11 [+] picture button
GTF2H3 ENSGACT00000010731 TFIIH basal transcription factor complex p34 subunit (Basic transcription factor 2 34 kDa subunit) (BTF2-p34) (General transcription factor IIH polypeptide 3). [Source:Uniprot/SWISSPROT;Acc:Q13889]
15.9398 -7.27 5.73998e-05 432 7 1 9 [+] picture button
PXK ENSGACT00000005200 PX domain-containing protein kinase-like protein (Modulator of Na,K- ATPase) (MONaKA). [Source:Uniprot/SWISSPROT;Acc:Q7Z7A4]
15.4306 -15.55 7.74794e-05 500 3 1 6 [+] picture button
HELLS ENSGACT00000005140 Lymphoid-specific helicase (EC 3.6.1.-) (SWI/SNF2-related matrix- associated actin-dependent regulator of chromatin subfamily A member 6) (Proliferation-associated SNF2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRZ9]
15.2694 -10.19 7.98182e-05 455 5 1 6 [+] picture button
TNFSF5IP1 ENSGACT00000004836 tumor necrosis factor superfamily, member 5-induced protein 1 [Source:RefSeq_peptide;Acc:NP_064617]
15.6366 -23.12 8.38245e-05 500 3 1 5 [+] picture button
LAMP2 ENSGACT00000023056 Lysosome-associated membrane glycoprotein 2 precursor (LAMP-2) (CD107b antigen). [Source:Uniprot/SWISSPROT;Acc:P13473]
15.8923 -20.72 0.000100807 500 7 2 14 [+] picture button
SOAT1 ENSGACT00000014521 Sterol O-acyltransferase 1 (EC 2.3.1.26) (Cholesterol acyltransferase 1) (Acyl coenzyme A:cholesterol acyltransferase 1) (ACAT-1). [Source:Uniprot/SWISSPROT;Acc:P35610]
16.325 -14.25 0.000109174 617 4 1 6 [+] picture button
FAM43A ENSGACT00000012333 Protein FAM43A. [Source:Uniprot/SWISSPROT;Acc:Q8N2R8]
15.5819 -9.22 0.000119102 500 4 3 4 [+] picture button
SAS10_HUMAN ENSGACT00000009867 Something about silencing protein 10 (Disrupter of silencing SAS10) (Charged amino acid-rich leucine zipper 1). [Source:Uniprot/SWISSPROT;Acc:Q9NQZ2]
15.7969 -15.9 0.000127477 500 5 1 6 [+] picture button
CCBL2 ENSGACT00000005795 kynurenine aminotransferase III isoform 1 [Source:RefSeq_peptide;Acc:NP_001008661]
15.4006 -19 0.000154537 319 8 3 11 [+] picture button
PYGL ENSGACT00000015885 Glycogen phosphorylase, liver form (EC 2.4.1.1). [Source:Uniprot/SWISSPROT;Acc:P06737]
15.4531 -13.79 0.000155071 624 7 1 10 [+] picture button
FIGN ENSGACT00000007279 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92]
15.4953 -16.11 0.000175472 500 5 10 6 [+] picture button
TMEM66 ENSGACT00000021745 Transmembrane protein 66 precursor (Protein FOAP-7) (HBV X- transactivated gene 3 protein). [Source:Uniprot/SWISSPROT;Acc:Q96BY9]
15.8095 -17.78 0.00017766 600 7 1 7 [+] picture button
TBPL2 ENSGACT00000005227 TATA box binding protein like 2 [Source:RefSeq_peptide;Acc:NP_950248]
16.7451 -15.9 0.000180286 500 6 1 7 [+] picture button
PACS1 ENSGACT00000025191 Phosphofurin acidic cluster sorting protein 1 (PACS-1). [Source:Uniprot/SWISSPROT;Acc:Q6VY07]
17.1487 -14.43 0.000199197 500 5 4 6 [+] picture button
FBXO34 ENSGACT00000007732 F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3]
16.2656 -16.68 0.000210158 500 5 1 8 [+] picture button
C20orf43 ENSGACT00000007865 Uncharacterized protein C20orf43. [Source:Uniprot/SWISSPROT;Acc:Q9BY42]
17.1997 -11.01 0.000213977 413 5 2 7 [+] picture button
POLR1A ENSGACT00000024892 DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6) (RNA polymerase I 194 kDa subunit) (RPA194). [Source:Uniprot/SWISSPROT;Acc:O95602]
17.3966 -19.3 0.000237496 279 8 2 13 [+] picture button
PRIM2A ENSGACT00000008137 DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa subunit) (p58). [Source:Uniprot/SWISSPROT;Acc:P49643]
15.7188 -20.99 0.000260559 406 7 2 13 [+] picture button
NP_689968.1 ENSGACT00000025580 PRotein Associated with Tlr4 [Source:RefSeq_peptide;Acc:NP_689968]
16.0118 -14.76 0.000307751 500 5 2 9 [+] picture button
ENSGACT00000026825 hypothetical protein LOC325530 [Source:RefSeq_peptide;Acc:NP_001077009]hypothetical protein LOC325530 [Source:RefSeq_peptide;Acc:NP_001077009] BY ORTHOLOGY TO:ENSDART00000097351
15.7969 -20.09 0.000312578 500 7 3 8 [+] picture button
BRAP ENSGACT00000000427 BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP) (RING finger protein 52) (Renal carcinoma antigen NY-REN-63). [Source:Uniprot/SWISSPROT;Acc:Q7Z569]
15.6441 -13.74 0.000312992 500 3 2 4 [+] picture button
ENSGACT00000019298 Homolog of Homo sapiens "Death-associated protein kinase 1 [Source:IPI;Acc:IPI00021250]"Homolog of Homo sapiens "Death-associated protein kinase 1 [Source:IPI;Acc:IPI00021250]" BY ORTHOLOGY TO:SINFRUT00000171640
16.9844 -12.95 0.00035312 500 6 2 11 [+] picture button
POLR3G ENSGACT00000013999 DNA-directed RNA polymerase III subunit G (EC 2.7.7.6) (DNA-directed RNA polymerase III 32 kDa polypeptide) (RNA polymerase III C32 subunit). [Source:Uniprot/SWISSPROT;Acc:O15318]
15.5819 -17.85 0.000364429 500 6 4 7 [+] picture button
NUDT16P ENSGACT00000005428 NUDT16P protein. [Source:Uniprot/SPTREMBL;Acc:Q6PJG7]
15.5819 -18.55 0.000364429 500 5 1 8 [+] picture button
PRKRIR (1 of 2) ENSGACT00000013816 52 kDa repressor of the inhibitor of the protein kinase (p58IPK- interacting protein) (58 kDa interferon-induced protein kinase- interacting protein) (P52rIPK) (Death-associated protein 4) (THAP domain-containing protein 0). [Source:Uniprot/SWISSPROT;Acc:O43422]
15.5819 -9.52 0.000386085 500 5 1 3 [+] picture button
RPN1 ENSGACT00000012747 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDa subunit precursor (EC 2.4.1.119) (Ribophorin I) (RPN-I). [Source:Uniprot/SWISSPROT;Acc:P04843]
15.799 -11.35 0.000408253 500 6 4 6 [+] picture button
C6orf192 ENSGACT00000015230 OTTHUMP00000017233. [Source:Uniprot/SPTREMBL;Acc:Q5TBJ2]
16.0322 -9.92 0.000414673 176 5 2 8 [+] picture button
TMEM4 ENSGACT00000000598 MIR-interacting saposin-like protein precursor (Transmembrane protein 4) (Putative secreted protein ZSIG9). [Source:Uniprot/SWISSPROT;Acc:Q9Y2B0]
17.0555 -18.14 0.000427641 226 5 2 11 [+] picture button
EEF2K ENSGACT00000003877 Elongation factor 2 kinase (EC 2.7.11.20) (eEF-2 kinase) (eEF-2K) (Calcium/calmodulin-dependent eukaryotic elongation factor 2 kinase). [Source:Uniprot/SWISSPROT;Acc:O00418]
15.5423 -14.61 0.000437204 512 8 1 9 [+] picture button
B4GALT7 ENSGACT00000021649 Beta-1,4-galactosyltransferase 7 (EC 2.4.1.-) (Beta-1,4-GalTase 7) (Beta4Gal-T7) (b4Gal-T7) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 7) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 7) [Includes: Xylosylprotein 4-beta [Source:Uniprot/SWISSPROT;Acc:Q9UBV7]
15.5469 -15.91 0.000456688 421 7 2 8 [+] picture button
ATP6V1F ENSGACT00000000882 Vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q16864]
15.4636 -10.54 0.000485855 226 6 1 8 [+] picture button

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Download table: GFF TXT
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