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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-96

875 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SH3KBP1 ENSGACT00000007191 SH3 domain-containing kinase-binding protein 1 (Cbl-interacting protein of 85 kDa) (Human Src-family kinase-binding protein 1) (HSB-1) (CD2-binding protein 3) (CD2BP3). [Source:Uniprot/SWISSPROT;Acc:Q96B97]
17.7699 -15.28 0.0000000000112506 500 5 10 4 [+] picture button
ST7 ENSGACT00000012029 suppression of tumorigenicity 7 isoform a [Source:RefSeq_peptide;Acc:NP_060882]
16.5172 -14.26 0.00000000805988 274 6 11 9 [+] picture button
MAB21L2 ENSGACT00000022740 mab-21-like protein 2 [Source:RefSeq_peptide;Acc:NP_006430]
18.0747 -19.87 0.00000000868223 500 5 6 8 [+] picture button
GULP1 ENSGACT00000003151 GULP, engulfment adaptor PTB domain containing 1 [Source:RefSeq_peptide;Acc:NP_057399]
15.982 -15.32 0.0000000095285 669 6 7 7 [+] picture button
Q5T4T1_HUMAN ENSGACT00000003063 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]
16.0426 -11.11 0.0000000245694 500 5 2 6 [+] picture button
ST3GAL3 (1 of 2) ENSGACT00000020619 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3- sialyltransferase (EC 2.4.99.6) (N-acetyllactosaminide alpha-2,3- sialyltransferase) (Gal beta-1,3(4) GlcNAc alpha-2,3 sialyltransferase) (ST3N) (ST3GalIII) (Sialyltransferase 6). [Source:Uniprot/SWISSPROT;Acc:Q11203]
15.6763 -13.39 0.000000108384 500 4 2 4 [+] picture button
GAD2 ENSGACT00000006820 Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate decarboxylase 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q05329]
17.8916 -25.52 0.000000203943 500 6 3 9 [+] picture button
PTPN9 ENSGACT00000009896 Tyrosine-protein phosphatase non-receptor type 9 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG2) (PTPase-MEG2). [Source:Uniprot/SWISSPROT;Acc:P43378]
17.0532 -19.46 0.000000346336 500 2 1 2 [+] picture button
DGKH ENSGACT00000012164 Diacylglycerol kinase eta (EC 2.7.1.107) (Diglyceride kinase eta) (DGK-eta) (DAG kinase eta). [Source:Uniprot/SWISSPROT;Acc:Q86XP1]
16.4704 -16.13 0.000000355312 500 3 3 3 [+] picture button
MYOCD ENSGACT00000002995 Myocardin. [Source:Uniprot/SWISSPROT;Acc:Q8IZQ8]
16.2846 -15.39 0.000000629628 500 4 1 2 [+] picture button
EXOC5 ENSGACT00000010498 Exocyst complex component 5 (Exocyst complex component Sec10) (hSec10). [Source:Uniprot/SWISSPROT;Acc:O00471]
15.6998 -12.94 0.0000016556 500 3 3 4 [+] picture button
ARL4D (1 of 2) ENSGACT00000004883 ADP-ribosylation factor-like protein 4D (ADP-ribosylation factor-like protein 4L). [Source:Uniprot/SWISSPROT;Acc:P49703]
16.2565 -19.72 0.0000017433 500 2 2 2 [+] picture button
WIPI2 ENSGACT00000010540 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2) (WIPI49-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y4P8]
16.7131 -12.35 0.00000184792 500 5 9 9 [+] picture button
AHCYL1 (1 of 2) ENSGACT00000001346 Putative adenosylhomocysteinase 2 (EC 3.3.1.1) (S-adenosyl-L- homocysteine hydrolase 2) (AdoHcyase 2) (S-adenosylhomocysteine hydrolase-like 1) (DC-expressed AHCY-like molecule). [Source:Uniprot/SWISSPROT;Acc:O43865]
17.1121 -13.6 0.00000215126 500 2 4 2 [+] picture button
CNR1 (1 of 2) ENSGACT00000010966 Cannabinoid receptor 1 (CB1) (CB-R) (CANN6). [Source:Uniprot/SWISSPROT;Acc:P21554]
18.0027 -19.93 0.00000258351 500 5 4 11 [+] picture button
NP_056129.1 ENSGACT00000010750 PREDICTED: Bos taurus hypothetical LOC527805 (LOC527805), partial mRNA. [Source:RefSeq_dna;Acc:XR_027993]PREDICTED: Bos taurus hypothetical LOC527805 (LOC527805), partial mRNA. [Source:RefSeq_dna;Acc:XR_027993] BY ORTHOLOGY TO:ENSBTAT00000002605
17.2409 -18.49 0.00000323003 500 3 1 7 [+] picture button
GRID1 ENSGACT00000013630 Glutamate receptor delta-1 subunit precursor (GluR delta-1). [Source:Uniprot/SWISSPROT;Acc:Q9ULK0]
16.9156 -15.46 0.00000331855 453 5 9 6 [+] picture button
BAI3 ENSGACT00000007998 Brain-specific angiogenesis inhibitor 3 precursor. [Source:Uniprot/SWISSPROT;Acc:O60242]
15.7009 -16.14 0.00000423388 500 6 10 11 [+] picture button
LRRC7 ENSGACT00000008225 Leucine-rich repeat-containing protein 7 (Protein LAP1) (Densin-180). [Source:Uniprot/SWISSPROT;Acc:Q96NW7]
18.0257 -22.04 0.00000433771 500 5 8 5 [+] picture button
KIAA1166 ENSGACT00000024543 Hepatocellular carcinoma-associated antigen 127. [Source:Uniprot/SWISSPROT;Acc:Q9NQZ6]
15.8387 -15.81 0.00000450389 747 3 2 5 [+] picture button
TMOD2 ENSGACT00000019823 Tropomodulin-2 (Neuronal tropomodulin) (N-Tmod). [Source:Uniprot/SWISSPROT;Acc:Q9NZR1]
16.5774 -14.64 0.00000619685 500 5 3 4 [+] picture button
SMEK1 ENSGACT00000012211 SMEK homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q6IN85]
16.3031 -13.73 0.00000710676 500 11 4 10 [+] picture button
PTPRM ENSGACT00000022060 Receptor-type tyrosine-protein phosphatase mu precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase mu) (R-PTP-mu). [Source:Uniprot/SWISSPROT;Acc:P28827]
16.4223 -19.59 0.00000753682 500 5 2 9 [+] picture button
KIAA2022 ENSGACT00000024163 Uncharacterized protein KIAA2022. [Source:Uniprot/SWISSPROT;Acc:Q5QGS0]
15.6148 -14.81 0.00000896622 500 6 7 9 [+] picture button
GTF2E1 ENSGACT00000009859 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
15.6147 -13.74 0.00000899391 500 8 1 6 [+] picture button
DFFA ENSGACT00000009415 DNA fragmentation factor subunit alpha (DNA fragmentation factor 45 kDa subunit) (DFF-45) (Inhibitor of CAD) (ICAD). [Source:Uniprot/SWISSPROT;Acc:O00273]
16.3102 -16.52 0.00000977593 456 5 3 7 [+] picture button
SOBP ENSGACT00000016922 sine oculis binding protein homolog [Source:RefSeq_peptide;Acc:NP_060483]
15.9357 -16.87 0.0000104884 500 1 4 2 [+] picture button
VIL2 (1 of 2) ENSGACT00000013250 Ezrin (p81) (Cytovillin) (Villin-2). [Source:Uniprot/SWISSPROT;Acc:P15311]
18.1218 -20.62 0.0000120323 500 8 4 10 [+] picture button
REV1 ENSGACT00000003820 DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase) (Alpha integrin-binding protein 80) (AIBP80). [Source:Uniprot/SWISSPROT;Acc:Q9UBZ9]
16.2787 -14.14 0.0000126518 311 8 2 14 [+] picture button
C1orf159 ENSGACT00000001968 Uncharacterized protein C1orf159 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HA4]
16.1589 -14.85 0.0000130412 664 5 2 5 [+] picture button
SLC30A1 ENSGACT00000013109 Zinc transporter 1 (ZnT-1) (Solute carrier family 30 member 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y6M5]
16.9385 -18.29 0.0000140551 500 5 3 6 [+] picture button
SERINC3 ENSGACT00000015169 Serine incorporator 3 (Tumor differentially expressed protein 1). [Source:Uniprot/SWISSPROT;Acc:Q13530]
17.0052 -20.08 0.0000143419 500 7 1 8 [+] picture button
HRH2 (2 of 2) ENSGACT00000026895 Histamine H2 receptor (H2R) (Gastric receptor I). [Source:Uniprot/SWISSPROT;Acc:P25021]
17.6851 -22.01 0.0000165418 500 4 2 4 [+] picture button
ATP10D ENSGACT00000017438 Probable phospholipid-transporting ATPase VD (EC 3.6.3.1) (ATPVD). [Source:Uniprot/SWISSPROT;Acc:Q9P241]
17.0623 -19.3 0.0000185103 500 3 1 3 [+] picture button
SESN1 ENSGACT00000011771 Sestrin-1 (p53-regulated protein PA26). [Source:Uniprot/SWISSPROT;Acc:Q9Y6P5]
16.6541 -16.5 0.0000209463 500 4 4 5 [+] picture button
SCAMP3 ENSGACT00000004358 Secretory carrier-associated membrane protein 3 (Secretory carrier membrane protein 3). [Source:Uniprot/SWISSPROT;Acc:O14828]
15.8352 -19.1 0.0000226085 683 5 2 7 [+] picture button
ARG1 ENSGACT00000013479 Arginase-1 (EC 3.5.3.1) (Type I arginase) (Liver-type arginase). [Source:Uniprot/SWISSPROT;Acc:P05089]
17.0383 -14.93 0.0000251739 463 3 2 6 [+] picture button
CORO7 ENSGACT00000014975 Coronin-7 (70 kDa WD repeat tumor rejection antigen homolog). [Source:Uniprot/SWISSPROT;Acc:P57737]
17.2191 -13.39 0.0000252423 500 6 1 6 [+] picture button
C18orf17 (1 of 2) ENSGACT00000005887 TPR repeat-containing protein C18orf17. [Source:Uniprot/SWISSPROT;Acc:Q8N584]
16.3635 -12.45 0.0000281909 500 5 1 6 [+] picture button
MTMR14 ENSGACT00000015036 Uncharacterized protein C3orf29 precursor (HCV NS5A-transactivated protein 4 splice variant A-binding protein 1) (NS5ATP4ABP1). [Source:Uniprot/SWISSPROT;Acc:Q8NCE2]
16.2811 -15.32 0.0000298734 500 7 3 8 [+] picture button
FLNC (2 of 2) ENSGACT00000013437 Filamin-C (Gamma-filamin) (Filamin-2) (Protein FLNc) (Actin-binding- like protein) (ABP-L) (ABP-280-like protein). [Source:Uniprot/SWISSPROT;Acc:Q14315]
17.4555 -15.04 0.0000300676 416 5 3 8 [+] picture button
ZIC2 ENSGACT00000002475 Zinc finger protein ZIC 2 (Zinc finger protein of the cerebellum 2). [Source:Uniprot/SWISSPROT;Acc:O95409]
16.1708 -15.33 0.000031433 810 3 7 3 [+] picture button
RGS17 ENSGACT00000013728 Regulator of G-protein signaling 17 (RGS17). [Source:Uniprot/SWISSPROT;Acc:Q9UGC6]
16.5944 -19.27 0.0000361989 500 6 3 8 [+] picture button
NP_001004354.1 ENSGACT00000023095 similar to ankyrin-repeat protein Nrarp (MGC61598), mRNA [Source:RefSeq_dna;Acc:NM_001004354]
16.8174 -13.87 0.0000367898 378 4 4 4 [+] picture button
ATP6AP1 (2 of 2) ENSGACT00000015070 Vacuolar ATP synthase subunit S1 precursor (EC 3.6.3.14) (V-ATPase S1 subunit) (V-ATPase S1 accessory protein) (V-ATPase Ac45 subunit) (XAP- 3). [Source:Uniprot/SWISSPROT;Acc:Q15904]
16.5353 -16.78 0.0000377249 745 4 2 4 [+] picture button
FGF10 (2 of 2) ENSGACT00000022877 Fibroblast growth factor 10 precursor (FGF-10) (Keratinocyte growth factor 2). [Source:Uniprot/SWISSPROT;Acc:O15520]
17.433 -18.23 0.0000384799 500 4 3 6 [+] picture button
FNBP4 ENSGACT00000017923 formin binding protein 4 [Source:RefSeq_peptide;Acc:NP_056123]
16.5951 -14.78 0.0000406397 429 6 4 12 [+] picture button
DZIP1 ENSGACT00000018496 Zinc finger protein DZIP1 (DAZ-interacting protein 1/2). [Source:Uniprot/SWISSPROT;Acc:Q86YF9]
16.3316 -14.4 0.0000414371 312 6 2 11 [+] picture button
UNC13C ENSGACT00000021871 Unc-13 homolog C (Munc13-3) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q8NB66]
16.5499 -21.65 0.0000424706 500 6 6 8 [+] picture button
ARHGEF16 ENSGACT00000008560 Rho guanine nucleotide exchange factor 16. [Source:Uniprot/SWISSPROT;Acc:Q5VV41]
16.4409 -16.91 0.0000472754 363 6 1 9 [+] picture button

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Download table: GFF TXT
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