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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-7

679 hits found.


Page 1 of 14
1 2 3 4 5 6 7 8 9 10 11 .. 14 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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HDC ENSGACT00000019851 Histidine decarboxylase (EC 4.1.1.22) (HDC). [Source:Uniprot/SWISSPROT;Acc:P19113]
16.4162 -18.8 3.29831e-06 500 4 1 4 [+] picture button
CLK2P ENSGACT00000004246 CDC-like kinase 2, pseudogene (CLK2P) on chromosome 7 [Source:RefSeq_dna;Acc:NR_002711]
16.6889 -15.72 4.71407e-06 198 1 2 4 [+] picture button
ALDH6A1 ENSGACT00000016697 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (EC 1.2.1.27) (MMSDH) (Malonate-semialdehyde dehydrogenase [acylating]) (EC 1.2.1.18). [Source:Uniprot/SWISSPROT;Acc:Q02252]
16.8616 -12.42 5.81139e-06 634 4 2 4 [+] picture button
NP_006324.1 ENSGACT00000015881 nuclear DNA-binding protein [Source:RefSeq_peptide;Acc:NP_006324]
16.1346 -12.07 7.47708e-06 500 1 1 1 [+] picture button
C6orf152 ENSGACT00000014436 Uncharacterized protein C6orf152. [Source:Uniprot/SWISSPROT;Acc:Q86VQ0]
16.0922 -13.11 8.29357e-06 500 8 1 9 [+] picture button
RHOH ENSGACT00000021406 Rho-related GTP-binding protein RhoH precursor (GTP-binding protein TTF). [Source:Uniprot/SWISSPROT;Acc:Q15669]
16.6322 -18.69 8.92046e-06 500 4 2 5 [+] picture button
PIWIL1 ENSGACT00000016208 Piwi-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96J94]
16.4682 -15.42 8.99302e-06 500 5 1 6 [+] picture button
IMPDH2 ENSGACT00000007588 Inosine-5'-monophosphate dehydrogenase 2 (EC 1.1.1.205) (IMP dehydrogenase 2) (IMPDH-II) (IMPD 2). [Source:Uniprot/SWISSPROT;Acc:P12268]
17.6757 -18.7 1.16956e-05 343 7 5 11 [+] picture button
CBR4 ENSGACT00000018684 carbonic reductase 4 [Source:RefSeq_peptide;Acc:NP_116172]
17.0008 -20.93 1.89147e-05 500 5 2 7 [+] picture button
TSSC1 ENSGACT00000017563 Protein TSSC1 (Tumor-suppressing subchromosomal transferable fragment candidate gene 1 protein) (Tumor-suppressing STF cDNA 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q53HC9]
16.6889 -15.98 3.27072e-05 91 2 1 2 [+] picture button
PPARD ENSGACT00000011003 Peroxisome proliferator-activated receptor delta (PPAR-delta) (PPAR- beta) (Nuclear hormone receptor 1) (NUC1) (NUCI). [Source:Uniprot/SWISSPROT;Acc:Q03181]
16.6087 -16.5 3.94549e-05 500 5 2 5 [+] picture button
EEF1B2 ENSGACT00000020352 Elongation factor 1-beta (EF-1-beta). [Source:Uniprot/SWISSPROT;Acc:P24534]
16.7402 -18.57 4.12897e-05 500 5 3 11 [+] picture button
DMRT2 ENSGACT00000019177 Doublesex- and mab-3-related transcription factor 2 (Doublesex-like 2 protein) (DSXL-2). [Source:Uniprot/SWISSPROT;Acc:Q9Y5R5]
16.1239 -13.18 4.21304e-05 500 3 3 3 [+] picture button
FKBP14 (1 of 2) ENSGACT00000009352 FK506-binding protein 14 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (22 kDa FK506-binding protein) (FKBP-22). [Source:Uniprot/SWISSPROT;Acc:Q9NWM8]
16.9176 -18.27 4.30848e-05 229 4 1 3 [+] picture button
TTK ENSGACT00000006951 Dual specificity protein kinase TTK (EC 2.7.12.1) (Phosphotyrosine picked threonine-protein kinase) (PYT). [Source:Uniprot/SWISSPROT;Acc:P33981]
16.346 -18.92 5.10143e-05 156 6 2 10 [+] picture button
MAD2L2 ENSGACT00000007163 Mitotic spindle assembly checkpoint protein MAD2B (MAD2-like 2) (hREV7). [Source:Uniprot/SWISSPROT;Acc:Q9UI95]
16.2501 -12.25 5.42867e-05 500 1 2 1 [+] picture button
GALE ENSGACT00000009402 UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase). [Source:Uniprot/SWISSPROT;Acc:Q14376]
18.5179 -20.91 5.68466e-05 255 4 1 10 [+] picture button
CDK9 ENSGACT00000024529 Cell division protein kinase 9 (EC 2.7.11.22) (EC 2.7.11.23) (Cyclin- dependent kinase 9) (Serine/threonine-protein kinase PITALRE) (C-2K) (Cell division cycle 2-like protein kinase 4). [Source:Uniprot/SWISSPROT;Acc:P50750]
16.3206 -14.05 5.80517e-05 480 3 1 3 [+] picture button
MREG ENSGACT00000010279 whn-dependent transcript 2 [Source:RefSeq_peptide;Acc:NP_060470]
16.1682 -14.1 7.00416e-05 500 5 2 6 [+] picture button
ZCCHC8 ENSGACT00000010824 Zinc finger CCHC domain-containing protein 8. [Source:Uniprot/SWISSPROT;Acc:Q6NZY4]
17.0084 -13.09 7.30159e-05 500 6 2 7 [+] picture button
NFYA ENSGACT00000010469 Nuclear transcription factor Y subunit alpha (Nuclear transcription factor Y subunit A) (NF-YA) (CAAT-box DNA-binding protein subunit A). [Source:Uniprot/SWISSPROT;Acc:P23511]
17.9282 -19.95 7.46851e-05 500 4 1 5 [+] picture button
NP_997211.2 ENSGACT00000007807 similar to Glycerol-3-phosphate acyltransferase, mitochondrial precursor (GPAT) (P90) (LOC643219), mRNA [Source:RefSeq_dna;Acc:XR_016369]
16.2495 -14.72 0.000111808 324 7 3 8 [+] picture button
ENSGACT00000012928 zinc finger protein 143 [Source:RefSeq_peptide;Acc:NP_957273]zinc finger protein 143 [Source:RefSeq_peptide;Acc:NP_957273] BY ORTHOLOGY TO:ENSDART00000038813
18.9626 -19.39 0.000112958 500 4 3 7 [+] picture button
OPTN ENSGACT00000025375 Optineurin (Optic neuropathy-inducing protein) (E3-14.7K-interacting protein) (FIP-2) (Huntingtin-interacting protein HYPL) (NEMO-related protein) (Transcription factor IIIA-interacting protein) (TFIIIA- IntP). [Source:Uniprot/SWISSPROT;Acc:Q96CV9]
16.2399 -15 0.000114671 588 6 3 10 [+] picture button
DDX24 ENSGACT00000010727 ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box protein 24). [Source:Uniprot/SWISSPROT;Acc:Q9GZR7]
16.4162 -15.65 0.000117665 500 4 2 4 [+] picture button
NP_079121.1 ENSGACT00000007776 CDNA FLJ14154 fis, clone NT2RM1000341 (FLJ14154 protein). [Source:Uniprot/SPTREMBL;Acc:Q9H7X0]
16.8482 -14.75 0.000123282 500 3 2 3 [+] picture button
TM9SF3 ENSGACT00000004107 Transmembrane 9 superfamily protein member 3 precursor (SM-11044- binding protein) (EP70-P-iso). [Source:Uniprot/SWISSPROT;Acc:Q9HD45]
16.4162 -14.39 0.000126792 500 4 1 6 [+] picture button
ENSGACT00000001043 Homolog of Brachydanio rerio "RAB family member rab-7. [Source:Uniprot/SPTREMBL;Acc:Q7T2C6]"Homolog of Brachydanio rerio "RAB family member rab-7. [Source:Uniprot/SPTREMBL;Acc:Q7T2C6]" BY ORTHOLOGY TO:SINFRUT00000145681
17.3783 -19 0.000136866 500 2 4 3 [+] picture button
TAF13 ENSGACT00000005559 Transcription initiation factor TFIID subunit 13 (Transcription initiation factor TFIID 18 kDa subunit) (TAF(II)18) (TAFII-18) (TAFII18). [Source:Uniprot/SWISSPROT;Acc:Q15543]
17.2802 -16.29 0.000144291 500 3 4 4 [+] picture button
COPS4 ENSGACT00000020762 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q9BT78]
17.2605 -13.48 0.00015463 289 5 2 7 [+] picture button
TUBB2B ENSGACT00000017433 Tubulin beta-2B chain. [Source:Uniprot/SWISSPROT;Acc:Q9BVA1]
18.1974 -19.3 0.000160536 500 3 2 3 [+] picture button
RASL10A ENSGACT00000011352 Ras-like protein family 10 member A precursor (Ras-like protein RRP22) (RAS-related protein on chromosome 22). [Source:Uniprot/SWISSPROT;Acc:Q92737]
17.4962 -16.07 0.000164138 500 7 3 8 [+] picture button
RACGAP1 ENSGACT00000010903 Rac GTPase-activating protein 1 (MgcRacGAP). [Source:Uniprot/SWISSPROT;Acc:Q9H0H5]
16.4162 -15.07 0.000167893 500 7 1 10 [+] picture button
UBXD4 ENSGACT00000016409 UBX domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:P68543]
16.314 -14.86 0.00021023 423 5 1 5 [+] picture button
ENSGACT00000006725 fatty acid synthasefatty acid synthase BY ORTHOLOGY TO:AAEL002227-RA
18.4683 -22.36 0.000216928 500 3 1 2 [+] picture button
LDHD ENSGACT00000003070 Probable D-lactate dehydrogenase, mitochondrial precursor (EC 1.1.2.4) (Lactate dehydrogenase D) (DLD). [Source:Uniprot/SWISSPROT;Acc:Q86WU2]
16.5746 -15.14 0.000246366 266 4 1 6 [+] picture button
MRPL30 ENSGACT00000003831 39S ribosomal protein L30, mitochondrial precursor (L30mt) (MRP-L30). [Source:Uniprot/SWISSPROT;Acc:Q8TCC3]
16.9562 -16.95 0.000248498 500 2 1 2 [+] picture button
SOCS4 ENSGACT00000014310 Suppressor of cytokine signaling 4 (SOCS-4) (Suppressor of cytokine signaling 7) (SOCS-7). [Source:Uniprot/SWISSPROT;Acc:Q8WXH5]
16.6322 -14.64 0.000268154 500 6 1 7 [+] picture button
STK11 ENSGACT00000020110 Serine/threonine-protein kinase 11 (EC 2.7.11.1) (Serine/threonine- protein kinase LKB1) (Renal carcinoma antigen NY-REN-19). [Source:Uniprot/SWISSPROT;Acc:Q15831]
17.2802 -14.05 0.000275324 500 6 2 9 [+] picture button
NKAP_HUMAN ENSGACT00000023075 NF-kappa-B-activating protein. [Source:Uniprot/SWISSPROT;Acc:Q8N5F7]
17.0319 -16.11 0.00027911 242 6 2 8 [+] picture button
FIGNL1 ENSGACT00000003986 fidgetin-like 1 [Source:RefSeq_peptide;Acc:NP_001036227]
16.5242 -12.25 0.000279569 500 5 2 7 [+] picture button
EXOC3 ENSGACT00000019622 Exocyst complex component 3 (Exocyst complex component Sec6). [Source:Uniprot/SWISSPROT;Acc:O60645]
17.0319 -14.23 0.000282599 185 5 3 7 [+] picture button
CLNS1A ENSGACT00000017550 Methylosome subunit pICln (Chloride conductance regulatory protein ICln) (I(Cln)) (Chloride channel, nucleotide sensitive 1A) (Chloride ion current inducer protein) (ClCI) (Reticulocyte pICln). [Source:Uniprot/SWISSPROT;Acc:P54105]
18.0627 -22.49 0.000301829 374 9 1 14 [+] picture button
SASS6 ENSGACT00000002637 Spindle assembly abnormal protein 6 homolog (HsSAS-6). [Source:Uniprot/SWISSPROT;Acc:Q6UVJ0]
17.3748 -14.49 0.000303089 274 5 4 8 [+] picture button
PPP1R3E ENSGACT00000018765 Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor). [Source:Uniprot/SWISSPROT;Acc:Q8IX15]
16.1274 -14.43 0.000310966 500 4 4 6 [+] picture button
TAS1R2 (5 of 8) ENSGACT00000008620 Taste receptor type 1 member 2 precursor (G-protein coupled receptor 71) (Sweet taste receptor T1R2). [Source:Uniprot/SWISSPROT;Acc:Q8TE23]
17.635 -13.85 0.000321879 500 2 1 1 [+] picture button
PBK ENSGACT00000009212 T-lymphokine-activated killer cell-originated protein kinase (EC 2.7.12.2) (T-LAK cell-originated protein kinase) (PDZ-binding kinase) (Spermatogenesis-related protein kinase) (SPK) (MAPKK-like protein kinase) (Nori-3). [Source:Uniprot/SWISSPROT;Acc:Q96KB5]
16.4603 -13.87 0.000327979 198 5 1 8 [+] picture button
RRAGB ENSGACT00000026935 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
17.0091 -16.67 0.000331018 384 8 2 8 [+] picture button
ENSGACT00000009382 Homolog of Gallus gallus "Chromobox protein (CHCB2). [Source:Uniprot/SPTREMBL;Acc:O93481]"Homolog of Gallus gallus "Chromobox protein (CHCB2). [Source:Uniprot/SPTREMBL;Acc:O93481]" BY ORTHOLOGY TO:SINFRUT00000159063
16.5329 -14.78 0.000338765 415 6 1 7 [+] picture button
PPAPDC1A ENSGACT00000004551 phosphatidic acid phosphatase type 2 domain containing 1A [Source:RefSeq_peptide;Acc:NP_001025230]
18.3603 -16.62 0.000344532 500 5 2 5 [+] picture button

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Download table: GFF TXT
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