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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-30d

854 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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TMCC1 (2 of 2) ENSGACT00000002154 Transmembrane and coiled-coil domains protein 1. [Source:Uniprot/SWISSPROT;Acc:O94876]
17.0461 -14.74 6.25363e-09 500 7 10 7 [+] picture button
FBXO42 ENSGACT00000001505 F-box only protein 42. [Source:Uniprot/SWISSPROT;Acc:Q6P3S6]
18.4874 -12.45 8.93635e-09 534 2 7 4 [+] picture button
FAM49A ENSGACT00000006313 Protein FAM49A. [Source:Uniprot/SWISSPROT;Acc:Q9H0Q0]
16.2341 -11.69 1.72474e-08 637 3 10 3 [+] picture button
MAP3K5 ENSGACT00000009648 Mitogen-activated protein kinase kinase kinase 5 (EC 2.7.11.25) (MAPK/ERK kinase kinase 5) (MEK kinase 5) (MEKK 5) (Apoptosis signal- regulating kinase 1) (ASK-1). [Source:Uniprot/SWISSPROT;Acc:Q99683]
16.764 -11.93 2.75869e-08 500 4 1 6 [+] picture button
UBAC1 ENSGACT00000018499 Ubiquitin-associated domain-containing protein 1 (E3 ubiquitin-protein ligase subunit KPC2) (Kip1 ubiquitination-promoting complex protein 2) (Glialblastoma cell differentiation-related protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9BSL1]
16.3277 -11.06 2.85949e-08 500 7 9 7 [+] picture button
MELK ENSGACT00000021292 Maternal embryonic leucine zipper kinase (EC 2.7.11.1) (hMELK) (Protein kinase PK38) (hPK38). [Source:Uniprot/SWISSPROT;Acc:Q14680]
17.3791 -17.3 3.31796e-08 381 7 2 9 [+] picture button
SOX3 ENSGACT00000022734 Transcription factor SOX-3. [Source:Uniprot/SWISSPROT;Acc:P41225]
16.4774 -15.62 6.9473e-08 500 6 4 6 [+] picture button
DAGLA ENSGACT00000020618 Sn1-specific diacylglycerol lipase alpha (EC 3.1.1.-) (DGL-alpha) (Neural stem cell-derived dendrite regulator). [Source:Uniprot/SWISSPROT;Acc:Q9Y4D2]
16.1192 -15.03 1.45802e-07 500 6 4 8 [+] picture button
DLL4 (1 of 2) ENSGACT00000017121 Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61]
16.7968 -15.99 1.61718e-07 500 5 2 5 [+] picture button
ATP6V1C1 (2 of 2) ENSGACT00000006108 Vacuolar ATP synthase subunit C (EC 3.6.3.14) (V-ATPase C subunit) (Vacuolar proton pump C subunit). [Source:Uniprot/SWISSPROT;Acc:P21283]
16.0273 -12.91 2.64772e-07 636 8 3 10 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.9601 -14.59 3.51349e-07 500 9 3 11 [+] picture button
JAG2 ENSGACT00000010010 Jagged-2 precursor (Jagged2) (HJ2). [Source:Uniprot/SWISSPROT;Acc:Q9Y219]
16.5178 -9.73 3.5211e-07 500 4 9 4 [+] picture button
GOLGA1 ENSGACT00000004703 Golgin subfamily A member 1 (Golgin-97). [Source:Uniprot/SWISSPROT;Acc:Q92805]
16.1192 -16.31 6.31101e-07 500 4 1 4 [+] picture button
SLC38A6 ENSGACT00000011254 N system amino acid transporter NAT-1 [Source:RefSeq_peptide;Acc:NP_722518]
16.2556 -10.69 7.41258e-07 340 11 2 14 [+] picture button
NKX2-2 ENSGACT00000009286 Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B). [Source:Uniprot/SWISSPROT;Acc:O95096]
16.2384 -12.38 8.6377e-07 500 6 11 6 [+] picture button
ENSGACT00000011523 hypothetical protein LOC445104 [Source:RefSeq_peptide;Acc:NP_001003498]hypothetical protein LOC445104 [Source:RefSeq_peptide;Acc:NP_001003498] BY ORTHOLOGY TO:ENSDART00000067806
16.4527 -14.07 1e-06 440 5 2 4 [+] picture button
ASAH1 ENSGACT00000022398 Acid ceramidase precursor (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase) (AC) (Putative 32 kDa heart protein) (PHP32) [Contains: Acid ceramidase subunit alpha; Acid ceramidase subunit beta]. [Source:Uniprot/SWISSPROT;Acc:Q13510]
16.9418 -16.55 1.05854e-06 249 5 3 5 [+] picture button
AP3S1 ENSGACT00000008224 AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma- 1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma- 3A-adaptin) (Clathrin-associated/assembly/adapter protein, small 3). [Source:Uniprot/SWISSPROT;Acc:Q92572]
17.1543 -20.55 1.10898e-06 684 6 1 9 [+] picture button
GALNT7 ENSGACT00000021742 N-acetylgalactosaminyltransferase 7 (EC 2.4.1.-) (Protein-UDP acetylgalactosaminyltransferase 7) (UDP-GalNAc:polypeptide N- acetylgalactosaminyltransferase 7) (Polypeptide GalNAc transferase 7) (GalNAc-T7) (pp-GaNTase 7). [Source:Uniprot/SWISSPROT;Acc:Q86SF2]
17.4659 -16.07 1.28746e-06 500 6 1 8 [+] picture button
TMEM5 ENSGACT00000017673 Transmembrane protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9Y2B1]
16.1192 -14.25 1.7001e-06 500 11 2 14 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
15.9855 -12.16 1.71429e-06 500 6 5 9 [+] picture button
SCN8A (1 of 2) ENSGACT00000011216 Sodium channel protein type 8 subunit alpha (Sodium channel protein type VIII subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.6). [Source:Uniprot/SWISSPROT;Acc:Q9UQD0]
16.216 -11.06 1.83046e-06 500 6 3 8 [+] picture button
TMEFF1 ENSGACT00000020880 transmembrane protein with EGF-like and two follistatin-like domains 1 [Source:RefSeq_peptide;Acc:NP_003683]
16.0715 -15.88 2.44302e-06 500 7 2 9 [+] picture button
FAM79A ENSGACT00000008743 Protein FAM79A. [Source:Uniprot/SWISSPROT;Acc:Q5T0D9]
16.1192 -12.66 2.47581e-06 500 7 1 14 [+] picture button
FVT1 ENSGACT00000017683 3-ketodihydrosphingosine reductase precursor (EC 1.1.1.102) (3- dehydrosphinganine reductase) (KDS reductase) (Follicular variant translocation protein 1) (FVT-1). [Source:Uniprot/SWISSPROT;Acc:Q06136]
16.7375 -17.55 2.51831e-06 500 5 3 9 [+] picture button
TRIP13 ENSGACT00000011347 Thyroid receptor-interacting protein 13 (TRIP-13) (Thyroid hormone receptor interactor 13) (Human papillomavirus type 16 E1 protein- binding protein) (HPV16 E1 protein-binding protein) (16E1-BP). [Source:Uniprot/SWISSPROT;Acc:Q15645]
16.1192 -17.35 2.71554e-06 500 8 4 11 [+] picture button
CTHRC1 ENSGACT00000006524 Collagen triple helix repeat-containing protein 1 precursor (NMTC1 protein). [Source:Uniprot/SWISSPROT;Acc:Q96CG8]
17.1161 -11.79 3.00703e-06 500 7 2 12 [+] picture button
RNF41 ENSGACT00000014366 E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41). [Source:Uniprot/SWISSPROT;Acc:Q9H4P4]
16.8715 -14.91 3.19516e-06 500 4 4 6 [+] picture button
BATF ENSGACT00000014033 ATF-like basic leucine zipper transcriptional factor B-ATF (SF-HT- activated gene 2) (SFA-2). [Source:Uniprot/SWISSPROT;Acc:Q16520]
16.6928 -20.43 3.69545e-06 500 3 4 6 [+] picture button
A1A5D9_HUMAN ENSGACT00000027355 Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]"Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]" BY ORTHOLOGY TO:SINFRUT00000154400
17.0555 -17.45 3.76654e-06 161 4 3 4 [+] picture button
NFYB ENSGACT00000025612 Nuclear transcription factor Y subunit beta (Nuclear transcription factor Y subunit B) (NF-YB) (CAAT-box DNA-binding protein subunit B). [Source:Uniprot/SWISSPROT;Acc:P25208]
15.8467 -14.78 3.8194e-06 428 7 4 11 [+] picture button
DOCK7 ENSGACT00000009151 Dedicator of cytokinesis protein 7. [Source:Uniprot/SWISSPROT;Acc:Q96N67]
15.9043 -17.83 4.06464e-06 500 6 2 7 [+] picture button
SIRT7 ENSGACT00000025213 NAD-dependent deacetylase sirtuin-7 (EC 3.5.1.-) (SIR2-like protein 7). [Source:Uniprot/SWISSPROT;Acc:Q9NRC8]
17.1655 -14.26 5.64485e-06 500 8 1 8 [+] picture button
MTMR1 ENSGACT00000000969 Myotubularin-related protein 1 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q13613]
18.161 -18.57 5.96187e-06 500 2 1 2 [+] picture button
ADAMTS1 ENSGACT00000019924 ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1). [Source:Uniprot/SWISSPROT;Acc:Q9UHI8]
16.1527 -14.16 6.26994e-06 500 8 3 12 [+] picture button
ADORA2B ENSGACT00000026827 Adenosine A2b receptor. [Source:Uniprot/SWISSPROT;Acc:P29275]
16.5441 -17.88 6.55278e-06 500 8 4 10 [+] picture button
KCTD14 ENSGACT00000017721 BTB/POZ domain-containing protein KCTD14. [Source:Uniprot/SWISSPROT;Acc:Q9BQ13]
16.764 -17.45 7.08224e-06 500 9 3 17 [+] picture button
NP_001017370.1 ENSGACT00000020278 similar to RIKEN cDNA 8030451K01 (LOC387921), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001012754]
16.3342 -15.59 7.72465e-06 500 10 1 15 [+] picture button
VIP ENSGACT00000001688 VIP peptides precursor [Contains: Intestinal peptide PHV-42; Intestinal peptide PHM-27 (Peptide histidine methioninamide 27); Vasoactive intestinal peptide (VIP) (Vasoactive intestinal polypeptide)]. [Source:Uniprot/SWISSPROT;Acc:P01282]
16.2804 -12.47 8.0273e-06 583 3 2 3 [+] picture button
SKIV2L ENSGACT00000003847 superkiller viralicidic activity 2-like homolog [Source:RefSeq_peptide;Acc:NP_008860]
17.2829 -11.06 8.66138e-06 202 2 1 3 [+] picture button
KLHDC5 ENSGACT00000026538 Kelch domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9P2K6]
15.87 -10.88 8.80496e-06 500 5 3 6 [+] picture button
ADA ENSGACT00000015201 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase). [Source:Uniprot/SWISSPROT;Acc:P00813]
16.1758 -10.8 9.55829e-06 500 6 1 8 [+] picture button
RNMT ENSGACT00000023310 mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine- N(7)-)-methyltransferase) (RG7MT1) (mRNA cap methyltransferase) (hcm1p) (hCMT1) (hMet). [Source:Uniprot/SWISSPROT;Acc:O43148]
16.3733 -14.94 9.98144e-06 75 2 3 5 [+] picture button
CRY2 ENSGACT00000003153 Cryptochrome-2. [Source:Uniprot/SWISSPROT;Acc:Q49AN0]
17.0965 -11.02 1.05191e-05 500 3 1 3 [+] picture button
SSRP1 ENSGACT00000023577 FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (FACT 80 kDa subunit) (FACTp80) (Chromatin- specific transcription elongation factor 80 kDa subunit) (Structure- specific recognition protein 1) (hSSRP1) (Recombination [Source:Uniprot/SWISSPROT;Acc:Q08945]
16.1472 -10.53 1.10592e-05 500 3 1 6 [+] picture button
RGS2 ENSGACT00000007742 Regulator of G-protein signaling 2 (RGS2) (G0/G1 switch regulatory protein 8). [Source:Uniprot/SWISSPROT;Acc:P41220]
16.2267 -17.37 1.15306e-05 500 8 2 9 [+] picture button
GRIK3 ENSGACT00000018330 Glutamate receptor, ionotropic kainate 3 precursor (Glutamate receptor 7) (GluR-7) (GluR7) (Excitatory amino acid receptor 5) (EAA5). [Source:Uniprot/SWISSPROT;Acc:Q13003]
17.4211 -18 1.28983e-05 500 3 1 3 [+] picture button
SH2B3 ENSGACT00000008333 SH2B adapter protein 3 (Lymphocyte-specific adapter protein Lnk) (Signal transduction protein Lnk) (Lymphocyte adapter protein). [Source:Uniprot/SWISSPROT;Acc:Q9UQQ2]
15.888 -14.35 1.29065e-05 500 9 1 9 [+] picture button
CCNL1 ENSGACT00000009438 Cyclin-L1 (Cyclin-L). [Source:Uniprot/SWISSPROT;Acc:Q9UK58]
15.921 -12.37 1.46071e-05 500 7 1 8 [+] picture button
SPTLC1 ENSGACT00000024729 Serine palmitoyltransferase 1 (EC 2.3.1.50) (Long chain base biosynthesis protein 1) (LCB 1) (Serine-palmitoyl-CoA transferase 1) (SPT 1) (SPT1). [Source:Uniprot/SWISSPROT;Acc:O15269]
16.0432 -13.82 1.59496e-05 639 6 1 5 [+] picture button

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Download table: GFF TXT
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