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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-30c

871 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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TMCC1 (2 of 2) ENSGACT00000002154 Transmembrane and coiled-coil domains protein 1. [Source:Uniprot/SWISSPROT;Acc:O94876]
16.6145 -15.81 0.00000000625363 500 7 10 7 [+] picture button
FBXO42 ENSGACT00000001505 F-box only protein 42. [Source:Uniprot/SWISSPROT;Acc:Q6P3S6]
16.6601 -9.66 0.00000000893635 534 2 7 4 [+] picture button
FAM49A ENSGACT00000006313 Protein FAM49A. [Source:Uniprot/SWISSPROT;Acc:Q9H0Q0]
16.8625 -14.5 0.0000000172474 637 3 10 3 [+] picture button
MAP3K5 ENSGACT00000009648 Mitogen-activated protein kinase kinase kinase 5 (EC 2.7.11.25) (MAPK/ERK kinase kinase 5) (MEK kinase 5) (MEKK 5) (Apoptosis signal- regulating kinase 1) (ASK-1). [Source:Uniprot/SWISSPROT;Acc:Q99683]
16.9789 -15.01 0.0000000275869 500 4 1 6 [+] picture button
UBAC1 ENSGACT00000018499 Ubiquitin-associated domain-containing protein 1 (E3 ubiquitin-protein ligase subunit KPC2) (Kip1 ubiquitination-promoting complex protein 2) (Glialblastoma cell differentiation-related protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9BSL1]
16.3277 -9.65 0.0000000285949 500 7 9 7 [+] picture button
MELK ENSGACT00000021292 Maternal embryonic leucine zipper kinase (EC 2.7.11.1) (hMELK) (Protein kinase PK38) (hPK38). [Source:Uniprot/SWISSPROT;Acc:Q14680]
17.6005 -14.67 0.0000000331796 381 7 2 9 [+] picture button
MMD ENSGACT00000019080 Monocyte to macrophage differentiation protein (Progestin and adipoQ receptor family member XI). [Source:Uniprot/SWISSPROT;Acc:Q15546]
17.0926 -13.31 0.0000000445195 500 4 3 8 [+] picture button
GFPT2 ENSGACT00000023921 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6- phosphate amidotransferase 2) (GFAT 2) (GFAT2). [Source:Uniprot/SWISSPROT;Acc:O94808]
16.4416 -14.2 0.000000052207 500 8 2 14 [+] picture button
SOX3 ENSGACT00000022734 Transcription factor SOX-3. [Source:Uniprot/SWISSPROT;Acc:P41225]
16.3682 -10.89 0.000000069473 500 6 4 6 [+] picture button
CHST12 (1 of 2) ENSGACT00000010611 Carbohydrate sulfotransferase 12 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 2) (Chondroitin 4-sulfotransferase 2) (C4ST2) (C4ST- 2) (Sulfotransferase Hlo). [Source:Uniprot/SWISSPROT;Acc:Q9NRB3]
15.9778 -19.7 0.000000093453 500 8 3 6 [+] picture button
DAGLA ENSGACT00000020618 Sn1-specific diacylglycerol lipase alpha (EC 3.1.1.-) (DGL-alpha) (Neural stem cell-derived dendrite regulator). [Source:Uniprot/SWISSPROT;Acc:Q9Y4D2]
16.6565 -12.31 0.000000145802 500 6 4 8 [+] picture button
DLL4 (1 of 2) ENSGACT00000017121 Delta-like protein 4 precursor (Drosophila Delta homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9NR61]
16.4738 -12.42 0.000000161718 500 5 2 5 [+] picture button
CUL2 ENSGACT00000002280 Cullin-2 (CUL-2). [Source:Uniprot/SWISSPROT;Acc:Q13617]
16.8564 -9.58 0.000000216726 627 2 14 2 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
17.2862 -16.75 0.000000351349 500 9 3 11 [+] picture button
SLC38A6 ENSGACT00000011254 N system amino acid transporter NAT-1 [Source:RefSeq_peptide;Acc:NP_722518]
16.2556 -7.58 0.000000741258 340 11 2 14 [+] picture button
NKX2-2 ENSGACT00000009286 Homeobox protein Nkx-2.2 (Homeobox protein NK-2 homolog B). [Source:Uniprot/SWISSPROT;Acc:O95096]
17.1044 -14.14 0.00000086377 500 6 11 6 [+] picture button
ENSGACT00000011523 hypothetical protein LOC445104 [Source:RefSeq_peptide;Acc:NP_001003498]hypothetical protein LOC445104 [Source:RefSeq_peptide;Acc:NP_001003498] BY ORTHOLOGY TO:ENSDART00000067806
16.5617 -9.73 0.000001 440 5 2 4 [+] picture button
ENSGACT00000017513 NOT ANNOTATED
16.5491 -13.39 0.000001 500 7 1 3 [+] picture button
ASAH1 ENSGACT00000022398 Acid ceramidase precursor (EC 3.5.1.23) (Acylsphingosine deacylase) (N-acylsphingosine amidohydrolase) (AC) (Putative 32 kDa heart protein) (PHP32) [Contains: Acid ceramidase subunit alpha; Acid ceramidase subunit beta]. [Source:Uniprot/SWISSPROT;Acc:Q13510]
16.3733 -11.56 0.00000105854 249 5 3 5 [+] picture button
GALNT7 ENSGACT00000021742 N-acetylgalactosaminyltransferase 7 (EC 2.4.1.-) (Protein-UDP acetylgalactosaminyltransferase 7) (UDP-GalNAc:polypeptide N- acetylgalactosaminyltransferase 7) (Polypeptide GalNAc transferase 7) (GalNAc-T7) (pp-GaNTase 7). [Source:Uniprot/SWISSPROT;Acc:Q86SF2]
17.4659 -18.31 0.00000128746 500 6 1 8 [+] picture button
TMEM5 ENSGACT00000017673 Transmembrane protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9Y2B1]
16.1192 -9.65 0.0000017001 500 11 2 14 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
16.8555 -10.59 0.00000171429 500 6 5 9 [+] picture button
SCN8A (1 of 2) ENSGACT00000011216 Sodium channel protein type 8 subunit alpha (Sodium channel protein type VIII subunit alpha) (Voltage-gated sodium channel subunit alpha Nav1.6). [Source:Uniprot/SWISSPROT;Acc:Q9UQD0]
16.216 -9.65 0.00000183046 500 6 3 8 [+] picture button
FAM79A ENSGACT00000008743 Protein FAM79A. [Source:Uniprot/SWISSPROT;Acc:Q5T0D9]
16.1192 -12.16 0.00000247581 500 7 1 14 [+] picture button
FVT1 ENSGACT00000017683 3-ketodihydrosphingosine reductase precursor (EC 1.1.1.102) (3- dehydrosphinganine reductase) (KDS reductase) (Follicular variant translocation protein 1) (FVT-1). [Source:Uniprot/SWISSPROT;Acc:Q06136]
16.9534 -16.75 0.00000251831 500 5 3 9 [+] picture button
CTHRC1 ENSGACT00000006524 Collagen triple helix repeat-containing protein 1 precursor (NMTC1 protein). [Source:Uniprot/SWISSPROT;Acc:Q96CG8]
16.3625 -17.18 0.00000300703 500 7 2 12 [+] picture button
RNF41 ENSGACT00000014366 E3 ubiquitin-protein ligase NRDP1 (EC 6.3.2.-) (RING finger protein 41). [Source:Uniprot/SWISSPROT;Acc:Q9H4P4]
17.5162 -21.33 0.00000319516 500 4 4 6 [+] picture button
A1A5D9_HUMAN ENSGACT00000027355 Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]"Homolog of Gallus gallus "Chick atrial myosin heavy chain. [Source:Uniprot/SPTREMBL;Acc:Q910C5]" BY ORTHOLOGY TO:SINFRUT00000154400
17.1692 -12.17 0.00000376654 161 4 3 4 [+] picture button
NFYB ENSGACT00000025612 Nuclear transcription factor Y subunit beta (Nuclear transcription factor Y subunit B) (NF-YB) (CAAT-box DNA-binding protein subunit B). [Source:Uniprot/SWISSPROT;Acc:P25208]
15.956 -17.58 0.0000038194 428 7 4 11 [+] picture button
DOCK7 ENSGACT00000009151 Dedicator of cytokinesis protein 7. [Source:Uniprot/SWISSPROT;Acc:Q96N67]
16.3342 -14.09 0.00000406464 500 6 2 7 [+] picture button
RFX2 ENSGACT00000010040 DNA-binding protein RFX2. [Source:Uniprot/SWISSPROT;Acc:P48378]
16.3342 -20.68 0.00000546396 500 9 5 11 [+] picture button
SIRT7 ENSGACT00000025213 NAD-dependent deacetylase sirtuin-7 (EC 3.5.1.-) (SIR2-like protein 7). [Source:Uniprot/SWISSPROT;Acc:Q9NRC8]
16.8417 -12.99 0.00000564485 500 8 1 8 [+] picture button
MTMR1 ENSGACT00000000969 Myotubularin-related protein 1 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q13613]
16.6565 -13.71 0.00000596187 500 2 1 2 [+] picture button
TAF7 ENSGACT00000022887 Transcription initiation factor TFIID subunit 7 (Transcription initiation factor TFIID 55 kDa subunit) (TAF(II)55) (TAFII-55) (TAFII55). [Source:Uniprot/SWISSPROT;Acc:Q15545]
16.6591 -20.86 0.00000596306 328 8 2 12 [+] picture button
ADAMTS1 ENSGACT00000019924 ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1). [Source:Uniprot/SWISSPROT;Acc:Q9UHI8]
17.562 -19.26 0.00000626994 500 8 3 12 [+] picture button
ADORA2B ENSGACT00000026827 Adenosine A2b receptor. [Source:Uniprot/SWISSPROT;Acc:P29275]
17.5173 -16.74 0.00000655278 500 8 4 10 [+] picture button
KIFAP3 (2 of 2) ENSGACT00000019456 Kinesin-associated protein 3 (Smg GDS-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q92845]
16.0396 -8.52 0.00000655877 500 5 3 9 [+] picture button
KCTD14 ENSGACT00000017721 BTB/POZ domain-containing protein KCTD14. [Source:Uniprot/SWISSPROT;Acc:Q9BQ13]
16.8715 -17.66 0.00000708224 500 9 3 17 [+] picture button
SKIV2L ENSGACT00000003847 superkiller viralicidic activity 2-like homolog [Source:RefSeq_peptide;Acc:NP_008860]
17.2829 -9.65 0.00000866138 202 2 1 3 [+] picture button
KLHDC5 ENSGACT00000026538 Kelch domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9P2K6]
15.87 -7.62 0.00000880496 500 5 3 6 [+] picture button
ADA ENSGACT00000015201 Adenosine deaminase (EC 3.5.4.4) (Adenosine aminohydrolase). [Source:Uniprot/SWISSPROT;Acc:P00813]
16.1758 -10.05 0.00000955829 500 6 1 8 [+] picture button
SSRP1 ENSGACT00000023577 FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (FACT 80 kDa subunit) (FACTp80) (Chromatin- specific transcription elongation factor 80 kDa subunit) (Structure- specific recognition protein 1) (hSSRP1) (Recombination [Source:Uniprot/SWISSPROT;Acc:Q08945]
16.9008 -15.78 0.0000110592 500 3 1 6 [+] picture button
GRIK3 ENSGACT00000018330 Glutamate receptor, ionotropic kainate 3 precursor (Glutamate receptor 7) (GluR-7) (GluR7) (Excitatory amino acid receptor 5) (EAA5). [Source:Uniprot/SWISSPROT;Acc:Q13003]
16.8801 -20.55 0.0000128983 500 3 1 3 [+] picture button
SH2B3 ENSGACT00000008333 SH2B adapter protein 3 (Lymphocyte-specific adapter protein Lnk) (Signal transduction protein Lnk) (Lymphocyte adapter protein). [Source:Uniprot/SWISSPROT;Acc:Q9UQQ2]
16.7527 -12.92 0.0000129065 500 9 1 9 [+] picture button
TACC2 ENSGACT00000006709 Transforming acidic coiled-coil-containing protein 2 (Anti Zuai-1) (AZU-1). [Source:Uniprot/SWISSPROT;Acc:O95359]
16.7551 -15.45 0.000013238 810 5 4 8 [+] picture button
SPTLC1 ENSGACT00000024729 Serine palmitoyltransferase 1 (EC 2.3.1.50) (Long chain base biosynthesis protein 1) (LCB 1) (Serine-palmitoyl-CoA transferase 1) (SPT 1) (SPT1). [Source:Uniprot/SWISSPROT;Acc:O15269]
16.3578 -9.26 0.0000159496 639 6 1 5 [+] picture button
ACAT2 ENSGACT00000011979 Acetyl-CoA acetyltransferase, cytosolic (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase) (Acetyl CoA transferase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9BWD1]
16.4838 -14.02 0.0000171799 407 7 1 7 [+] picture button
DNAJC13 ENSGACT00000006352 DnaJ homolog subfamily C member 13 (Required for receptor-mediated endocytosis 8). [Source:Uniprot/SWISSPROT;Acc:O75165]
17.587 -19.63 0.0000189659 500 5 2 7 [+] picture button
RKHD3 ENSGACT00000016592 RNA-binding protein MEX3B (RING finger and KH domain-containing protein 3) (RING finger protein 195). [Source:Uniprot/SWISSPROT;Acc:Q6ZN04]
16.3625 -18.23 0.0000190952 500 4 7 5 [+] picture button
BRAF ENSGACT00000025506 B-Raf proto-oncogene serine/threonine-protein kinase (EC 2.7.11.1) (p94) (v-Raf murine sarcoma viral oncogene homolog B1). [Source:Uniprot/SWISSPROT;Acc:P15056]
16.0118 -8.49 0.0000208585 500 6 1 7 [+] picture button

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Download table: GFF TXT
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