spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-29b

1000 hits found.


Page 1 of 20
1 2 3 4 5 6 7 8 9 10 11 .. 20 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
COL4A1 ENSGACT00000004675 Collagen alpha-1(IV) chain precursor (Arresten). [Source:Uniprot/SWISSPROT;Acc:P02462]
17.8386 -22.74 0.00000000927711 500 3 4 4 [+] picture button
MFAP2 ENSGACT00000001479 Microfibrillar-associated protein 2 precursor (MFAP-2) (Microfibril- associated glycoprotein) (MAGP) (MAGP-1). [Source:Uniprot/SWISSPROT;Acc:P55001]
15.3839 -16.69 0.00000000999724 743 3 3 4 [+] picture button
REV3L ENSGACT00000008592 DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (hREV3). [Source:Uniprot/SWISSPROT;Acc:O60673]
15.4235 -12.46 0.0000000165594 611 4 8 8 [+] picture button
HDAC4 (1 of 2) ENSGACT00000002904 Histone deacetylase 4 (HD4). [Source:Uniprot/SWISSPROT;Acc:P56524]
16.764 -19.37 0.0000000179166 500 4 1 5 [+] picture button
Q9HCM6_HUMAN ENSGACT00000023234 Homolog of Homo sapiens "CXXC finger 6 [Source:UniGene;Acc:Hs.156905]"Homolog of Homo sapiens "CXXC finger 6 [Source:UniGene;Acc:Hs.156905]" BY ORTHOLOGY TO:SINFRUT00000166785
15.5819 -19.99 0.0000000340622 500 5 2 5 [+] picture button
MAD2L1BP ENSGACT00000006054 MAD2L1-binding protein (Caught by MAD2 protein). [Source:Uniprot/SWISSPROT;Acc:Q15013]
15.691 -13.1 0.0000000383458 141 4 6 8 [+] picture button
LOXL4 ENSGACT00000010153 Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl oxidase-like protein 4) (Lysyl oxidase-related protein C). [Source:Uniprot/SWISSPROT;Acc:Q96JB6]
16.5491 -21.1 0.0000000676529 500 4 3 5 [+] picture button
ARVCF (1 of 2) ENSGACT00000017234 Armadillo repeat protein deleted in velo-cardio-facial syndrome. [Source:Uniprot/SWISSPROT;Acc:O00192]
16.487 -20.25 0.000000127966 163 4 1 5 [+] picture button
FIGN ENSGACT00000007279 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92]
16.6956 -18.08 0.000000277854 500 5 10 6 [+] picture button
BRWD3 ENSGACT00000026930 Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45]
16.1642 -14.75 0.00000039307 500 2 2 2 [+] picture button
Q5TF58_HUMAN ENSGACT00000002186 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5TF58]
16.4738 -14.51 0.00000056273 500 2 6 2 [+] picture button
SERPINH1 (1 of 2) ENSGACT00000008488 Serpin H1 precursor (Collagen-binding protein) (Colligin) (47 kDa heat shock protein) (Rheumatoid arthritis-related antigen RA-A47) (Arsenic- transactivated protein 3) (AsTP3) (Proliferation-inducing gene 14 protein). [Source:Uniprot/SWISSPROT;Acc:P50454]
16.7767 -23.22 0.000000590753 536 7 3 11 [+] picture button
ADAMTS10 ENSGACT00000010178 ADAMTS-10 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 10) (ADAM-TS 10) (ADAM-TS10) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9H324]
16.9789 -17.6 0.000000605049 500 5 5 6 [+] picture button
ITGA5 (1 of 2) ENSGACT00000014554 Integrin alpha-5 precursor (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD49e antigen) [Contains: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]. [Source:Uniprot/SWISSPROT;Acc:P08648]
16.2109 -17.35 0.000000617421 500 7 4 9 [+] picture button
KDELR3 ENSGACT00000009693 ER lumen protein retaining receptor 3 (KDEL receptor 3) (KDEL endoplasmic reticulum protein retention receptor 3). [Source:Uniprot/SWISSPROT;Acc:O43731]
15.978 -18.03 0.00000086671 500 6 3 6 [+] picture button
NP_612637.1 ENSGACT00000012825 CDNA FLJ46472 fis, clone THYMU3023400. [Source:Uniprot/SPTREMBL;Acc:Q6ZRC5]
16.2267 -18.57 0.000001 500 12 4 9 [+] picture button
VIT ENSGACT00000005850 Vitrin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UXI7]
16.1472 -19.6 0.00000103656 500 8 2 10 [+] picture button
FAM91A1 ENSGACT00000006781 Protein FAM91A1. [Source:Uniprot/SWISSPROT;Acc:Q658Y4]
15.8312 -16.01 0.00000110996 500 7 3 10 [+] picture button
TNIP2 ENSGACT00000022276 A20-binding inhibitor of NF-kappaB activation 2 [Source:RefSeq_peptide;Acc:NP_077285]
16.28 -15.29 0.0000015031 500 5 4 7 [+] picture button
PHF10 ENSGACT00000021363 PHD finger protein 10 (XAP135). [Source:Uniprot/SWISSPROT;Acc:Q8WUB8]
16.3342 -20.73 0.00000208877 500 2 1 3 [+] picture button
SMOX ENSGACT00000023329 Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1) (PAO-1) (PAOh1). [Source:Uniprot/SWISSPROT;Acc:Q9NWM0]
16.4115 -14.79 0.00000265447 340 8 5 18 [+] picture button
CAPRIN2 ENSGACT00000025473 C1q domain containing 1 isoform 2 [Source:RefSeq_peptide;Acc:NP_076414]
15.9043 -16.02 0.00000269308 500 4 3 6 [+] picture button
HMCN1 ENSGACT00000009770 Hemicentin-1 precursor (Fibulin-6) (FIBL-6). [Source:Uniprot/SWISSPROT;Acc:Q96RW7]
16.1472 -14.57 0.00000335365 500 3 1 6 [+] picture button
FAM119A ENSGACT00000019460 family with sequence similarity 119, member A (FAM119A), mRNA [Source:RefSeq_dna;Acc:NM_145280]
16.0823 -21.7 0.00000431926 500 5 2 7 [+] picture button
Q9NW00_HUMAN ENSGACT00000024286 CDNA FLJ10404 fis, clone NT2RM4000486 (Hypothetical protein DKFZp313I142) (FLJ10404 protein). [Source:Uniprot/SPTREMBL;Acc:Q9NW00]
18.161 -17.18 0.00000431956 500 3 3 3 [+] picture button
C22orf30 ENSGACT00000020466 Uncharacterized protein C22orf30. [Source:Uniprot/SPTREMBL;Acc:Q5THK1]
16.7593 -16.33 0.00000521954 372 8 2 13 [+] picture button
AACS ENSGACT00000018132 acetoacetyl-CoA synthetase [Source:RefSeq_peptide;Acc:NP_076417]
16.1976 -16.94 0.00000552436 500 2 1 4 [+] picture button
RFXAP ENSGACT00000027236 Regulatory factor X-associated protein (RFX DNA-binding complex 36 kDa subunit) (RFX-associated protein). [Source:Uniprot/SWISSPROT;Acc:O00287]
16.3342 -17.16 0.00000651512 500 6 1 10 [+] picture button
EN1 (1 of 2) ENSGACT00000001963 Homeobox protein engrailed-1 (Hu-En-1). [Source:Uniprot/SWISSPROT;Acc:Q05925]
15.4745 -15.63 0.00000673524 500 6 2 8 [+] picture button
TPM1 ENSGACT00000014098 Tropomyosin-1 alpha chain (Alpha-tropomyosin). [Source:Uniprot/SWISSPROT;Acc:P09493]
17.9128 -16.06 0.00000692927 636 5 1 6 [+] picture button
SBK1 ENSGACT00000011250 Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q52WX2]
16.5491 -18.79 0.00000760169 500 8 4 10 [+] picture button
SLMO2 (2 of 2) ENSGACT00000008415 Uncharacterized protein C20orf45. [Source:Uniprot/SWISSPROT;Acc:Q9Y3B1]
16.6007 -13.26 0.00000793676 237 9 2 14 [+] picture button
TMEM38A ENSGACT00000011324 Transmembrane protein 38A. [Source:Uniprot/SWISSPROT;Acc:Q9H6F2]
17.0965 -18.34 0.0000080152 469 1 2 1 [+] picture button
PTCH1 ENSGACT00000009327 Protein patched homolog 1 (PTC1) (PTC). [Source:Uniprot/SWISSPROT;Acc:Q13635]
16.5413 -18.25 0.000008523 500 5 4 5 [+] picture button
SLC7A4 ENSGACT00000015802 Cationic amino acid transporter 4 (CAT-4) (CAT4). [Source:Uniprot/SWISSPROT;Acc:O43246]
16.2267 -12.84 0.00000897799 500 4 4 5 [+] picture button
CXXC6 ENSGACT00000010352 CXXC-type zinc finger protein 6 (Leukemia-associated protein with a CXXC domain). [Source:Uniprot/SWISSPROT;Acc:Q8NFU7]
17.0864 -18.19 0.00000926551 500 9 6 10 [+] picture button
AICDA ENSGACT00000013940 Activation-induced cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase). [Source:Uniprot/SWISSPROT;Acc:Q9GZX7]
16.1192 -16.48 0.00000951167 500 9 1 12 [+] picture button
STX1A ENSGACT00000013212 Syntaxin-1A (Neuron-specific antigen HPC-1). [Source:Uniprot/SWISSPROT;Acc:Q16623]
15.5819 -15.13 0.00000955064 500 7 2 7 [+] picture button
ARPC3 ENSGACT00000023323 Actin-related protein 2/3 complex subunit 3 (ARP2/3 complex 21 kDa subunit) (p21-ARC). [Source:Uniprot/SWISSPROT;Acc:O15145]
16.0747 -16.37 0.0000107629 546 2 1 2 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
16.638 -15.09 0.0000107659 500 6 5 9 [+] picture button
NP_001034869.1 ENSGACT00000027470 similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780]
15.6555 -13.26 0.0000110111 500 2 2 6 [+] picture button
DDX24 ENSGACT00000010727 ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box protein 24). [Source:Uniprot/SWISSPROT;Acc:Q9GZR7]
19.2356 -20.57 0.0000130454 500 4 2 4 [+] picture button
GRHL1 ENSGACT00000011693 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
16.0118 -16.01 0.00001335 500 9 5 13 [+] picture button
FANCM ENSGACT00000012492 Fanconi anemia group M protein (EC 3.6.1.-) (ATP-dependent RNA helicase FANCM) (Protein FACM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog). [Source:Uniprot/SWISSPROT;Acc:Q8IYD8]
16.5491 -22.36 0.0000141015 500 5 2 8 [+] picture button
MIZF ENSGACT00000027035 MBD2-interacting zinc finger protein (Methyl-CpG-binding protein 2- interacting zinc finger protein). [Source:Uniprot/SWISSPROT;Acc:Q9BQA5]
15.9043 -16.18 0.0000141733 500 5 1 9 [+] picture button
XDH ENSGACT00000020422 Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC 1.17.3.2) (XO) (Xanthine oxidoreductase)]. [Source:Uniprot/SWISSPROT;Acc:P47989]
17.0528 -17.51 0.0000175984 548 3 1 3 [+] picture button
RPS6KB1 (1 of 2) ENSGACT00000026755 Ribosomal protein S6 kinase beta-1 (EC 2.7.11.1) (Ribosomal protein S6 kinase I) (S6K) (S6K1) (70 kDa ribosomal protein S6 kinase 1) (p70 S6 kinase alpha) (p70(S6K)-alpha) (p70-S6K) (P70S6K) (p70-alpha). [Source:Uniprot/SWISSPROT;Acc:P23443]
18.7777 -20.51 0.0000193145 507 5 4 5 [+] picture button
PLSCR3 ENSGACT00000025701 Phospholipid scramblase 3 (PL scramblase 3) (Ca(2+)-dependent phospholipid scramblase 3). [Source:Uniprot/SWISSPROT;Acc:Q9NRY6]
16.2596 -21.69 0.0000239965 130 3 2 5 [+] picture button
ELOVL1 (2 of 2) ENSGACT00000018084 Elongation of very long chain fatty acids protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9BW60]
18.2247 -20.67 0.0000260588 500 6 4 6 [+] picture button
TIMELESS ENSGACT00000000709 Timeless homolog (hTIM). [Source:Uniprot/SWISSPROT;Acc:Q9UNS1]
15.4243 -16.54 0.0000285031 500 4 1 4 [+] picture button

Page 1 of 20
1 2 3 4 5 6 7 8 9 10 11 .. 20 next >>

Download table: GFF TXT
spacer
spacer