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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-29a

984 hits found.


Page 1 of 20
1 2 3 4 5 6 7 8 9 10 11 .. 20 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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COL4A1 ENSGACT00000004675 Collagen alpha-1(IV) chain precursor (Arresten). [Source:Uniprot/SWISSPROT;Acc:P02462]
17.5162 -22.09 9.27711e-09 500 3 4 4 [+] picture button
HDAC4 (1 of 2) ENSGACT00000002904 Histone deacetylase 4 (HD4). [Source:Uniprot/SWISSPROT;Acc:P56524]
17.6237 -19.61 1.79166e-08 500 4 1 5 [+] picture button
LOXL4 ENSGACT00000010153 Lysyl oxidase homolog 4 precursor (EC 1.4.3.-) (Lysyl oxidase-like protein 4) (Lysyl oxidase-related protein C). [Source:Uniprot/SWISSPROT;Acc:Q96JB6]
16.5491 -22.16 6.76529e-08 500 4 3 5 [+] picture button
ARVCF (1 of 2) ENSGACT00000017234 Armadillo repeat protein deleted in velo-cardio-facial syndrome. [Source:Uniprot/SWISSPROT;Acc:O00192]
15.8047 -16.5 1.27966e-07 163 4 1 5 [+] picture button
FIGN ENSGACT00000007279 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92]
16.6956 -17.75 2.77854e-07 500 5 10 6 [+] picture button
BRWD3 ENSGACT00000026930 Bromodomain and WD repeat domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q6RI45]
16.4896 -15.21 3.9307e-07 500 2 2 2 [+] picture button
Q5TF58_HUMAN ENSGACT00000002186 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5TF58]
16.4738 -14.11 5.6273e-07 500 2 6 2 [+] picture button
SERPINH1 (1 of 2) ENSGACT00000008488 Serpin H1 precursor (Collagen-binding protein) (Colligin) (47 kDa heat shock protein) (Rheumatoid arthritis-related antigen RA-A47) (Arsenic- transactivated protein 3) (AsTP3) (Proliferation-inducing gene 14 protein). [Source:Uniprot/SWISSPROT;Acc:P50454]
15.3875 -18.35 5.90753e-07 536 7 3 11 [+] picture button
ADAMTS10 ENSGACT00000010178 ADAMTS-10 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 10) (ADAM-TS 10) (ADAM-TS10) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9H324]
15.9043 -16.14 6.05049e-07 500 5 5 6 [+] picture button
ITGA5 (1 of 2) ENSGACT00000014554 Integrin alpha-5 precursor (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD49e antigen) [Contains: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]. [Source:Uniprot/SWISSPROT;Acc:P08648]
16.6461 -17.81 6.17421e-07 500 7 4 9 [+] picture button
KDELR3 ENSGACT00000009693 ER lumen protein retaining receptor 3 (KDEL receptor 3) (KDEL endoplasmic reticulum protein retention receptor 3). [Source:Uniprot/SWISSPROT;Acc:O43731]
15.6541 -18.39 8.6671e-07 500 6 3 6 [+] picture button
NP_612637.1 ENSGACT00000012825 CDNA FLJ46472 fis, clone THYMU3023400. [Source:Uniprot/SPTREMBL;Acc:Q6ZRC5]
16.3342 -22.23 1e-06 500 12 4 9 [+] picture button
VIT ENSGACT00000005850 Vitrin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UXI7]
16.1472 -19.23 1.03656e-06 500 8 2 10 [+] picture button
FAM91A1 ENSGACT00000006781 Protein FAM91A1. [Source:Uniprot/SWISSPROT;Acc:Q658Y4]
16.1543 -21.09 1.10996e-06 500 7 3 10 [+] picture button
TNIP2 ENSGACT00000022276 A20-binding inhibitor of NF-kappaB activation 2 [Source:RefSeq_peptide;Acc:NP_077285]
16.28 -14.92 1.5031e-06 500 5 4 7 [+] picture button
PHF10 ENSGACT00000021363 PHD finger protein 10 (XAP135). [Source:Uniprot/SWISSPROT;Acc:Q8WUB8]
16.4416 -20.33 2.08877e-06 500 2 1 3 [+] picture button
NP_060229.2 ENSGACT00000005704 CDNA FLJ20309 fis, clone HEP07296. [Source:Uniprot/SPTREMBL;Acc:Q9NXD5]
15.4745 -16.46 2.64446e-06 500 6 2 7 [+] picture button
SMOX ENSGACT00000023329 Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1) (PAO-1) (PAOh1). [Source:Uniprot/SWISSPROT;Acc:Q9NWM0]
16.8612 -14.84 2.65447e-06 340 8 5 18 [+] picture button
CAPRIN2 ENSGACT00000025473 C1q domain containing 1 isoform 2 [Source:RefSeq_peptide;Acc:NP_076414]
15.4745 -15.26 2.69308e-06 500 4 3 6 [+] picture button
NP_001010866.1 ENSGACT00000009735 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5SNT2]
15.6894 -16.19 3.10257e-06 500 7 5 7 [+] picture button
HMCN1 ENSGACT00000009770 Hemicentin-1 precursor (Fibulin-6) (FIBL-6). [Source:Uniprot/SWISSPROT;Acc:Q96RW7]
16.1472 -15.05 3.35365e-06 500 3 1 6 [+] picture button
FAM119A ENSGACT00000019460 family with sequence similarity 119, member A (FAM119A), mRNA [Source:RefSeq_dna;Acc:NM_145280]
15.3268 -14.39 4.31926e-06 500 5 2 7 [+] picture button
Q9NW00_HUMAN ENSGACT00000024286 CDNA FLJ10404 fis, clone NT2RM4000486 (Hypothetical protein DKFZp313I142) (FLJ10404 protein). [Source:Uniprot/SPTREMBL;Acc:Q9NW00]
17.9461 -18.59 4.31956e-06 500 3 3 3 [+] picture button
C22orf30 ENSGACT00000020466 Uncharacterized protein C22orf30. [Source:Uniprot/SPTREMBL;Acc:Q5THK1]
15.9824 -18.95 5.21954e-06 372 8 2 13 [+] picture button
AACS ENSGACT00000018132 acetoacetyl-CoA synthetase [Source:RefSeq_peptide;Acc:NP_076417]
15.9816 -17.05 5.52436e-06 500 2 1 4 [+] picture button
RFXAP ENSGACT00000027236 Regulatory factor X-associated protein (RFX DNA-binding complex 36 kDa subunit) (RFX-associated protein). [Source:Uniprot/SWISSPROT;Acc:O00287]
16.0118 -13.18 6.51512e-06 500 6 1 10 [+] picture button
TPM1 ENSGACT00000014098 Tropomyosin-1 alpha chain (Alpha-tropomyosin). [Source:Uniprot/SWISSPROT;Acc:P09493]
17.9128 -15.83 6.92927e-06 636 5 1 6 [+] picture button
SBK1 ENSGACT00000011250 Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q52WX2]
16.2267 -18.14 7.60169e-06 500 8 4 10 [+] picture button
SLMO2 (2 of 2) ENSGACT00000008415 Uncharacterized protein C20orf45. [Source:Uniprot/SWISSPROT;Acc:Q9Y3B1]
16.2596 -19.65 7.93676e-06 237 9 2 14 [+] picture button
TMEM38A ENSGACT00000011324 Transmembrane protein 38A. [Source:Uniprot/SWISSPROT;Acc:Q9H6F2]
16.7719 -16.36 8.0152e-06 469 1 2 1 [+] picture button
PTCH1 ENSGACT00000009327 Protein patched homolog 1 (PTC1) (PTC). [Source:Uniprot/SWISSPROT;Acc:Q13635]
15.6707 -16.58 8.523e-06 500 5 4 5 [+] picture button
SLC7A4 ENSGACT00000015802 Cationic amino acid transporter 4 (CAT-4) (CAT4). [Source:Uniprot/SWISSPROT;Acc:O43246]
16.2267 -13.2 8.97799e-06 500 4 4 5 [+] picture button
CXXC6 ENSGACT00000010352 CXXC-type zinc finger protein 6 (Leukemia-associated protein with a CXXC domain). [Source:Uniprot/SWISSPROT;Acc:Q8NFU7]
17.3013 -17.55 9.26551e-06 500 9 6 10 [+] picture button
SARDH ENSGACT00000023039 Sarcosine dehydrogenase, mitochondrial precursor (EC 1.5.99.1) (SarDH) (BPR-2). [Source:Uniprot/SWISSPROT;Acc:Q9UL12]
15.9925 -12.99 9.29917e-06 500 6 3 10 [+] picture button
AICDA ENSGACT00000013940 Activation-induced cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase). [Source:Uniprot/SWISSPROT;Acc:Q9GZX7]
15.5819 -15.83 9.51167e-06 500 9 1 12 [+] picture button
STX1A ENSGACT00000013212 Syntaxin-1A (Neuron-specific antigen HPC-1). [Source:Uniprot/SWISSPROT;Acc:Q16623]
16.4416 -18.94 9.55064e-06 500 7 2 7 [+] picture button
ARPC3 ENSGACT00000023323 Actin-related protein 2/3 complex subunit 3 (ARP2/3 complex 21 kDa subunit) (p21-ARC). [Source:Uniprot/SWISSPROT;Acc:O15145]
17.4586 -17.13 1.07629e-05 546 2 1 2 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
16.3117 -17.1 1.07659e-05 500 6 5 9 [+] picture button
NP_001034869.1 ENSGACT00000027470 similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780]
16.4165 -12.43 1.10111e-05 500 2 2 6 [+] picture button
DDX24 ENSGACT00000010727 ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box protein 24). [Source:Uniprot/SWISSPROT;Acc:Q9GZR7]
18.161 -18.93 1.30454e-05 500 4 2 4 [+] picture button
GRHL1 ENSGACT00000011693 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
15.5819 -18.86 1.335e-05 500 9 5 13 [+] picture button
FANCM ENSGACT00000012492 Fanconi anemia group M protein (EC 3.6.1.-) (ATP-dependent RNA helicase FANCM) (Protein FACM) (Fanconi anemia-associated polypeptide of 250 kDa) (FAAP250) (Protein Hef ortholog). [Source:Uniprot/SWISSPROT;Acc:Q8IYD8]
16.764 -19.84 1.41015e-05 500 5 2 8 [+] picture button
MIZF ENSGACT00000027035 MBD2-interacting zinc finger protein (Methyl-CpG-binding protein 2- interacting zinc finger protein). [Source:Uniprot/SWISSPROT;Acc:Q9BQA5]
16.0118 -16.59 1.41733e-05 500 5 1 9 [+] picture button
XDH ENSGACT00000020422 Xanthine dehydrogenase/oxidase [Includes: Xanthine dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC 1.17.3.2) (XO) (Xanthine oxidoreductase)]. [Source:Uniprot/SWISSPROT;Acc:P47989]
16.0936 -17.83 1.75984e-05 548 3 1 3 [+] picture button
RPS6KB1 (1 of 2) ENSGACT00000026755 Ribosomal protein S6 kinase beta-1 (EC 2.7.11.1) (Ribosomal protein S6 kinase I) (S6K) (S6K1) (70 kDa ribosomal protein S6 kinase 1) (p70 S6 kinase alpha) (p70(S6K)-alpha) (p70-S6K) (P70S6K) (p70-alpha). [Source:Uniprot/SWISSPROT;Acc:P23443]
18.2412 -18.86 1.93145e-05 507 5 4 5 [+] picture button
PLSCR3 ENSGACT00000025701 Phospholipid scramblase 3 (PL scramblase 3) (Ca(2+)-dependent phospholipid scramblase 3). [Source:Uniprot/SWISSPROT;Acc:Q9NRY6]
16.1459 -20.52 2.39965e-05 130 3 2 5 [+] picture button
ELOVL1 (2 of 2) ENSGACT00000018084 Elongation of very long chain fatty acids protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9BW60]
17.362 -16.69 2.60588e-05 500 6 4 6 [+] picture button
NAV1 (1 of 2) ENSGACT00000006680 neuron navigator 1 [Source:RefSeq_peptide;Acc:NP_065176]
17.3013 -22.56 2.88433e-05 500 8 3 10 [+] picture button
FAM40B ENSGACT00000025090 Protein FAM40B. [Source:Uniprot/SWISSPROT;Acc:Q9ULQ0]
17.3972 -18.81 3.09679e-05 500 8 3 11 [+] picture button
ECT2 ENSGACT00000002695 ECT2 protein (Epithelial cell-transforming sequence 2 oncogene). [Source:Uniprot/SWISSPROT;Acc:Q9H8V3]
15.6894 -12.57 3.26987e-05 500 6 5 6 [+] picture button

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Download table: GFF TXT
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