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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-23a

786 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PRKAR2B ENSGACT00000013314 cAMP-dependent protein kinase type II-beta regulatory subunit. [Source:Uniprot/SWISSPROT;Acc:P31323]
16.3342 -13.45 0.00000146847 500 3 3 5 [+] picture button
PRLR ENSGACT00000021790 Prolactin receptor precursor (PRL-R). [Source:Uniprot/SWISSPROT;Acc:P16471]
17.301 -17.51 0.000001976 500 5 1 8 [+] picture button
MAB21L2 ENSGACT00000022740 mab-21-like protein 2 [Source:RefSeq_peptide;Acc:NP_006430]
16.8715 -16.78 0.00000200968 500 5 6 8 [+] picture button
G3BP2 ENSGACT00000022953 Ras GTPase-activating protein-binding protein 2 (G3BP-2) (GAP SH3 domain-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9UN86]
16.6179 -16.57 0.00000203553 500 4 9 5 [+] picture button
FAM120B ENSGACT00000021318 PPARgamma constitutive coactivator 1 [Source:RefSeq_peptide;Acc:NP_115824]
17.838 -23.04 0.00000219433 529 5 2 4 [+] picture button
TGFBR3 ENSGACT00000005726 TGF-beta receptor type III precursor (TGFR-3) (Transforming growth factor beta receptor III) (Betaglycan). [Source:Uniprot/SWISSPROT;Acc:Q03167]
16.6965 -14.53 0.00000226261 500 8 2 10 [+] picture button
MYO5C ENSGACT00000007978 Myosin-Vc. [Source:Uniprot/SWISSPROT;Acc:Q9NQX4]
16.4416 -16.2 0.0000026089 500 4 1 6 [+] picture button
CAMTA1 ENSGACT00000016405 Calmodulin-binding transcription activator 1. [Source:Uniprot/SWISSPROT;Acc:Q9Y6Y1]
19.2809 -32.41 0.00000316129 500 5 6 10 [+] picture button
MCM3AP ENSGACT00000003390 80 kDa MCM3-associated protein (GANP protein). [Source:Uniprot/SWISSPROT;Acc:O60318]
17.5103 -12.61 0.00000333259 194 3 6 4 [+] picture button
PSMA1 ENSGACT00000008773 Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome nu chain) (30 kDa prosomal protein) (PROS-30). [Source:Uniprot/SWISSPROT;Acc:P25786]
16.2596 -9.21 0.00000413637 268 5 2 8 [+] picture button
NP_689704.3 ENSGACT00000016610 CDNA FLJ32569 fis, clone SPLEN2000134, weakly similar to CARBOXYPEPTIDASE S (EC 3.4.17.4). [Source:Uniprot/SPTREMBL;Acc:Q96DM4]
19.557 -16.56 0.00000418828 243 8 2 11 [+] picture button
HOXA3 ENSGACT00000009419 Homeobox protein Hox-A3 (Hox-1E). [Source:Uniprot/SWISSPROT;Acc:O43365]
16.2234 -9.87 0.00000484975 500 6 9 12 [+] picture button
TMEM93 ENSGACT00000026815 Transmembrane protein 93. [Source:Uniprot/SWISSPROT;Acc:Q9BV81]
16.7425 -16.02 0.00000587686 423 8 2 11 [+] picture button
SMS ENSGACT00000027381 Spermine synthase (EC 2.5.1.22) (Spermidine aminopropyltransferase) (SPMSY). [Source:Uniprot/SWISSPROT;Acc:P52788]
16.529 -13.71 0.00000631923 436 5 1 5 [+] picture button
GGH ENSGACT00000004069 Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). [Source:Uniprot/SWISSPROT;Acc:Q92820]
17.1692 -11.86 0.00000698146 294 5 2 6 [+] picture button
PXMP2 ENSGACT00000011862 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
16.2549 -18.84 0.00000958285 500 6 1 8 [+] picture button
C14orf153 ENSGACT00000006334 Uncharacterized protein C14orf153 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96IL0]
16.6565 -13.39 0.0000119317 500 6 1 9 [+] picture button
CXCL14 ENSGACT00000021784 Small inducible cytokine B14 precursor (CXCL14) (Chemokine BRAK). [Source:Uniprot/SWISSPROT;Acc:O95715]
18.1954 -17.14 0.0000120178 500 3 1 4 [+] picture button
KLHL11 (1 of 2) ENSGACT00000011667 Kelch-like protein 11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NVR0]
16.1614 -12.84 0.0000124817 500 6 3 8 [+] picture button
DHX32 ENSGACT00000003451 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Source:RefSeq_peptide;Acc:NP_060650]
16.6565 -12.7 0.0000143246 500 5 3 8 [+] picture button
PIK3R3 (1 of 2) ENSGACT00000006881 Phosphatidylinositol 3-kinase regulatory subunit gamma (PI3-kinase p85-subunit gamma) (PtdIns-3-kinase p85-gamma) (p55PIK). [Source:Uniprot/SWISSPROT;Acc:Q92569]
17.8213 -13.29 0.0000189815 500 6 5 5 [+] picture button
RBM35A ENSGACT00000012130 RNA-binding protein 35A (RNA-binding motif protein 35A). [Source:Uniprot/SWISSPROT;Acc:Q6NXG1]
16.4416 -17.04 0.000021345 500 4 1 10 [+] picture button
KIAA0423 ENSGACT00000008659 Uncharacterized protein KIAA0423. [Source:Uniprot/SWISSPROT;Acc:Q9Y4F4]
16.1543 -11.44 0.0000224662 500 8 2 12 [+] picture button
NR6A1 ENSGACT00000004676 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
17.3966 -12.97 0.0000299803 125 2 12 2 [+] picture button
VKORC1L1 ENSGACT00000026798 Vitamin K epoxide reductase complex subunit 1-like protein 1 (VKORC1- like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8N0U8]
16.165 -14.77 0.0000545496 500 7 6 11 [+] picture button
TRIM67 ENSGACT00000009136 Tripartite motif-containing protein 67 (TRIM9-like protein). [Source:Uniprot/SWISSPROT;Acc:Q6ZTA4]
16.4791 -20.25 0.0000567109 624 4 1 4 [+] picture button
PUS7 ENSGACT00000005054 Pseudouridylate synthase 7 homolog (EC 5.4.99.-). [Source:Uniprot/SWISSPROT;Acc:Q96PZ0]
16.6484 -13.05 0.0000579605 500 4 2 5 [+] picture button
ANKZF1 ENSGACT00000007916 Ankyrin repeat and zinc finger domain-containing protein 1 (Zinc finger protein 744). [Source:Uniprot/SWISSPROT;Acc:Q9H8Y5]
16.4416 -19.51 0.000058646 500 4 1 5 [+] picture button
NID1 (1 of 3) ENSGACT00000005564 Nidogen-1 precursor (Entactin). [Source:Uniprot/SWISSPROT;Acc:P14543]
16.5237 -13.75 0.0000657215 436 9 3 9 [+] picture button
DAXX ENSGACT00000002406 Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain- associated protein) (ETS1-associated protein 1) (EAP1). [Source:Uniprot/SWISSPROT;Acc:Q9UER7]
16.1192 -13.98 0.000068509 500 6 2 8 [+] picture button
PSPC1 ENSGACT00000019706 paraspeckle protein 1 [Source:RefSeq_peptide;Acc:NP_001035879]
17.5863 -14.89 0.0000705938 500 7 1 7 [+] picture button
BCL6B ENSGACT00000025624 B-cell CLL/lymphoma 6 member B protein (Bcl6-associated zinc finger protein) (Zinc finger protein 62). [Source:Uniprot/SWISSPROT;Acc:Q8N143]
16.1697 -13.92 0.0000763223 622 7 1 6 [+] picture button
KIAA1957 ENSGACT00000020308 RIKEN cDNA 4932409I22 gene [Source:MarkerSymbol;Acc:MGI:2685084]RIKEN cDNA 4932409I22 gene [Source:MarkerSymbol;Acc:MGI:2685084] BY ORTHOLOGY TO:ENSMUST00000059699
17.0864 -18.44 0.0000782229 500 7 1 8 [+] picture button
DIS3L2 ENSGACT00000021743 DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Source:RefSeq_peptide;Acc:NP_689596]
18.4834 -14.02 0.0000782229 500 4 1 4 [+] picture button
ETNK1 ENSGACT00000025272 Ethanolamine kinase 1 (EC 2.7.1.82) (EKI 1). [Source:Uniprot/SWISSPROT;Acc:Q9HBU6]
17.2127 -20.62 0.0000798547 500 7 1 7 [+] picture button
LASS6 ENSGACT00000007081 LAG1 longevity assurance homolog 6. [Source:Uniprot/SWISSPROT;Acc:Q6ZMG9]
16.7508 -15.61 0.0000809028 500 6 2 9 [+] picture button
CHKA ENSGACT00000003105 Choline kinase alpha (EC 2.7.1.32) (CK) (CHETK-alpha). [Source:Uniprot/SWISSPROT;Acc:P35790]
16.7125 -16.46 0.000080947 500 5 1 7 [+] picture button
NRCAM ENSGACT00000025011 Neuronal cell adhesion molecule precursor (Nr-CAM) (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (hBravo). [Source:Uniprot/SWISSPROT;Acc:Q92823]
16.2584 -25.15 0.0000830192 500 7 4 10 [+] picture button
TDRD7 (1 of 2) ENSGACT00000026358 Tudor domain-containing protein 7 (Tudor repeat associator with PCTAIRE 2) (Trap). [Source:Uniprot/SWISSPROT;Acc:Q8NHU6]
16.2267 -18.83 0.0000842043 500 5 1 4 [+] picture button
NUDC ENSGACT00000010194 Nuclear migration protein nudC (Nuclear distribution protein C homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y266]
16.6565 -19.13 0.0000863881 500 5 1 6 [+] picture button
NP_068761.4 ENSGACT00000025448 CDNA: FLJ23339 fis, clone HEP13401. [Source:Uniprot/SPTREMBL;Acc:Q9H5K9]
17.0555 -13.71 0.0000887658 272 8 1 10 [+] picture button
QSOX1 ENSGACT00000014394 Sulfhydryl oxidase 1 precursor (EC 1.8.3.2) (Quiescin Q6) (hQSOX). [Source:Uniprot/SWISSPROT;Acc:O00391]
16.4024 -14.07 0.0000946229 500 6 3 6 [+] picture button
ENSGACT00000003610 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:RefSeq_peptide;Acc:NP_001007889]transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:RefSeq_peptide;Acc:NP_001007889] BY ORTHOLOGY TO:ENSGALT00000025230
16.7144 -16.87 0.0000988401 296 4 2 5 [+] picture button
ZBTB34 ENSGACT00000015927 Zinc finger and BTB domain-containing protein 34. [Source:Uniprot/SWISSPROT;Acc:Q8NCN2]
17.7335 -13.26 0.000100512 500 9 4 8 [+] picture button
GABRG2 ENSGACT00000027471 Gamma-aminobutyric-acid receptor subunit gamma-2 precursor (GABA(A) receptor subunit gamma-2). [Source:Uniprot/SWISSPROT;Acc:P18507]
17.3543 -17.28 0.000119315 500 5 3 6 [+] picture button
C20orf82 ENSGACT00000005989 Uncharacterized protein C20orf82 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9H599]
16.2267 -18.19 0.000119546 500 7 9 8 [+] picture button
HRH1 ENSGACT00000009741 Histamine H1 receptor. [Source:Uniprot/SWISSPROT;Acc:P35367]
17.0854 -12.73 0.000124109 500 3 1 4 [+] picture button
SLC35D2 ENSGACT00000008902 solute carrier family 35, member D2 [Source:RefSeq_peptide;Acc:NP_008932]
16.0751 -11.54 0.000128395 500 6 2 7 [+] picture button
ENSGACT00000011864 Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1B (EC 2.4.1.122) (Core 1 beta1,3-galactosyltransferase 1B) (Core1 UDP- galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1B) (Core 1 beta3-Gal-T B) (C1GalT1 B) (Core 1 O [Source:Uniprot/SWISSPROT;Acc:Q08BL3]Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1B (EC 2.4.1.122) (Core 1 beta1,3-galactosyltransferase 1B) (Core1 UDP- galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1B) (Core 1 beta3-Gal-T B) (C1GalT1 B) (Core 1 O [Source:Uniprot/SWISSPROT;Acc:Q08BL3] BY ORTHOLOGY TO:ENSDART00000053958
17.0864 -16.74 0.000130394 500 5 1 4 [+] picture button
IKBKB ENSGACT00000005456 Inhibitor of nuclear factor kappa-B kinase subunit beta (EC 2.7.11.10) (I-kappa-B-kinase beta) (IkBKB) (IKK-beta) (IKK-B) (I-kappa-B kinase 2) (IKK2) (Nuclear factor NF-kappa-B inhibitor kinase beta) (NFKBIKB). [Source:Uniprot/SWISSPROT;Acc:O14920]
17.5732 -15.52 0.000134819 365 9 3 14 [+] picture button

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Download table: GFF TXT
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