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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-21

845 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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WWP1 ENSGACT00000002428 NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-) (WW domain- containing protein 1) (Atropin-1-interacting protein 5) (AIP5). [Source:Uniprot/SWISSPROT;Acc:Q9H0M0]
17.0951 -18.17 0.0000000365059 500 3 11 3 [+] picture button
GALNT12 ENSGACT00000007801 Polypeptide N-acetylgalactosaminyltransferase 12 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 12) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 12) (Polypeptide GalNAc transferase 12) (GalNAc-T12) (pp-GaNTase 12). [Source:Uniprot/SWISSPROT;Acc:Q8IXK2]
15.6884 -13.27 0.000000323064 500 5 1 8 [+] picture button
CDC37L1 ENSGACT00000023112 cell division cycle 37 homolog (S. cerevisiae)-like 1 [Source:RefSeq_peptide;Acc:NP_060383]
16.5774 -15.21 0.00000108348 500 8 1 10 [+] picture button
C17orf84 ENSGACT00000011113 Myosin phosphatase Rho-interacting protein (Rho-interacting protein 3) (M-RIP) (RIP3) (p116Rip). [Source:Uniprot/SWISSPROT;Acc:Q6WCQ1]
16.7913 -19.11 0.00000216118 500 3 1 6 [+] picture button
KIAA1411 ENSGACT00000007831 KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819]
15.7661 -19.08 0.00000332294 500 4 4 7 [+] picture button
UFC1 ENSGACT00000020477 Ufm1-conjugating enzyme 1 (Ubiquitin-fold modifier-conjugating enzyme 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y3C8]
15.9153 -14.8 0.0000041441 1064 3 1 3 [+] picture button
P2RY1 ENSGACT00000013576 P2Y purinoceptor 1 (ATP receptor) (P2Y1) (Purinergic receptor). [Source:Uniprot/SWISSPROT;Acc:P47900]
16.5169 -16.58 0.00000924676 500 5 4 6 [+] picture button
UNG ENSGACT00000011853 Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). [Source:Uniprot/SWISSPROT;Acc:P13051]
18.2142 -16.97 0.0000130434 233 6 3 7 [+] picture button
Q6R2W1_GASAC ENSGACT00000021804 Transcription factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6R2W1]
15.8981 -18.48 0.0000141946 500 5 3 8 [+] picture button
SKI (2 of 2) ENSGACT00000001584 Ski oncogene (C-ski). [Source:Uniprot/SWISSPROT;Acc:P12755]
16.7913 -11.61 0.0000146616 500 4 4 5 [+] picture button
RASAL1 ENSGACT00000015819 RasGAP-activating-like protein 1. [Source:Uniprot/SWISSPROT;Acc:O95294]
16.3635 -16.45 0.0000187685 500 7 1 8 [+] picture button
CASR ENSGACT00000027407 Extracellular calcium-sensing receptor precursor (CaSR) (Parathyroid Cell calcium-sensing receptor). [Source:Uniprot/SWISSPROT;Acc:P41180]
15.9357 -11.14 0.0000276202 500 6 4 7 [+] picture button
UMPS ENSGACT00000010221 Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRTase); Orotidine 5'- phosphate decarboxylase (EC 4.1.1.23) (OMPdecase)]. [Source:Uniprot/SWISSPROT;Acc:P11172]
15.8105 -21.03 0.0000278318 611 4 1 5 [+] picture button
ENSGACT00000011974 All-1 related protein. [Source:Uniprot/SPTREMBL;Acc:O93321]All-1 related protein. [Source:Uniprot/SPTREMBL;Acc:O93321] BY ORTHOLOGY TO:SINFRUT00000158604
17.0721 -20.1 0.0000284175 500 4 5 4 [+] picture button
CDK7 ENSGACT00000013039 Cell division protein kinase 7 (EC 2.7.11.22) (EC 2.7.11.23) (CDK- activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 kDa protein kinase) (P39 Mo15) (STK1) (CAK1). [Source:Uniprot/SWISSPROT;Acc:P50613]
16.6303 -12.29 0.000032648 257 3 2 4 [+] picture button
DTWD1 ENSGACT00000022234 DTW domain containing 1 [Source:RefSeq_peptide;Acc:NP_064619]
16.6303 -16.46 0.000032648 157 3 1 10 [+] picture button
MASTL ENSGACT00000006735 Microtubule-associated serine/threonine-protein kinase-like (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:Q96GX5]
15.7218 -16.31 0.0000357646 500 5 1 6 [+] picture button
CCDC117 ENSGACT00000011325 Coiled-coil domain-containing protein 117. [Source:Uniprot/SWISSPROT;Acc:Q8IWD4]
16.7913 -29.86 0.0000418681 500 7 1 8 [+] picture button
TM7SF4 ENSGACT00000006379 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]
17.6469 -20.87 0.0000468101 500 3 2 4 [+] picture button
LOC649930 ENSGACT00000024276 px19-like protein [Source:RefSeq_peptide;Acc:NP_001033227]px19-like protein [Source:RefSeq_peptide;Acc:NP_001033227] BY ORTHOLOGY TO:ENSBTAT00000006594
15.9515 -19.13 0.0000477104 142 2 3 4 [+] picture button
CABLES2 (2 of 2) ENSGACT00000015796 CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2) (Ik3-2). [Source:Uniprot/SWISSPROT;Acc:Q9BTV7]
17.3957 -24.28 0.000058719 642 6 3 7 [+] picture button
PSMD10 ENSGACT00000024519 26S proteasome non-ATPase regulatory subunit 10 (26S proteasome regulatory subunit p28) (Gankyrin). [Source:Uniprot/SWISSPROT;Acc:O75832]
15.5079 -21 0.0000610314 500 6 1 6 [+] picture button
PDK1 ENSGACT00000006459 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 1, mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 1). [Source:Uniprot/SWISSPROT;Acc:Q15118]
16.4855 -17.92 0.0000662841 758 3 2 3 [+] picture button
RGS10 ENSGACT00000023875 Regulator of G-protein signaling 10 (RGS10). [Source:Uniprot/SWISSPROT;Acc:O43665]
16.4704 -16.6 0.0000716212 500 7 3 8 [+] picture button
SAV1 ENSGACT00000015724 Salvador homolog 1 protein (45 kDa WW domain protein) (hWW45). [Source:Uniprot/SWISSPROT;Acc:Q9H4B6]
15.9842 -13.05 0.0000817724 500 6 3 6 [+] picture button
C21orf6 ENSGACT00000015651 Uncharacterized protein C21orf6. [Source:Uniprot/SWISSPROT;Acc:P57060]
16.318 -9.65 0.0000903732 427 5 2 13 [+] picture button
SCAP ENSGACT00000016723 Sterol regulatory element-binding protein cleavage-activating protein (SREBP cleavage-activating protein) (SCAP). [Source:Uniprot/SWISSPROT;Acc:Q12770]
17.8762 -21.15 0.0000975211 500 5 3 9 [+] picture button
NP_612392.1 (2 of 2) ENSGACT00000017730 actin-bundling protein with BAIAP2 homology (ABBA-1), mRNA [Source:RefSeq_dna;Acc:NM_138383]
17.1949 -13.95 0.0000978515 500 7 2 5 [+] picture button
ARPC1B ENSGACT00000022036 Actin-related protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC). [Source:Uniprot/SWISSPROT;Acc:O15143]
16.7384 -18.04 0.000101665 382 12 6 15 [+] picture button
CDKL5 (2 of 2) ENSGACT00000019944 Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine- protein kinase 9). [Source:Uniprot/SWISSPROT;Acc:O76039]
16.0923 -12.78 0.000105271 500 3 1 3 [+] picture button
TMC5 ENSGACT00000025438 transmembrane channel-like 5 [Source:RefSeq_peptide;Acc:NP_079056]
16.8982 -15.28 0.00012589 500 4 2 4 [+] picture button
TARSL2 ENSGACT00000019364 threonyl-tRNA synthetase-like 2 [Source:RefSeq_peptide;Acc:NP_689547]
16.4041 -21.54 0.000127047 224 6 2 8 [+] picture button
SH3BP5 (1 of 2) ENSGACT00000002231 SH3 domain-binding protein 5 (SH3 domain-binding protein that preferentially associates with BTK). [Source:Uniprot/SWISSPROT;Acc:O60239]
18.0437 -19.46 0.000129193 661 5 2 5 [+] picture button
CHODL ENSGACT00000001513 Chondrolectin precursor (Transmembrane protein MT75). [Source:Uniprot/SWISSPROT;Acc:Q9H9P2]
16.0426 -14.94 0.000130787 500 5 4 5 [+] picture button
DUSP4 ENSGACT00000023484 Dual specificity protein phosphatase 4 (EC 3.1.3.48) (EC 3.1.3.16) (Mitogen-activated protein kinase phosphatase 2) (MAP kinase phosphatase 2) (MKP-2) (Dual specificity protein phosphatase hVH2). [Source:Uniprot/SWISSPROT;Acc:Q13115]
16.3351 -11.01 0.000142331 500 2 4 2 [+] picture button
HHIP ENSGACT00000022799 Hedgehog-interacting protein precursor (HHIP) (HIP). [Source:Uniprot/SWISSPROT;Acc:Q96QV1]
16.3799 -13.85 0.000149291 500 3 3 3 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
18.1813 -17.21 0.00015208 500 6 5 9 [+] picture button
SPRED2 (2 of 2) ENSGACT00000000216 Sprouty-related, EVH1 domain-containing protein 2 (Spred-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z698]
16.0372 -17.87 0.000160323 500 7 4 10 [+] picture button
BRF2 ENSGACT00000022583 RNA polymerase III transcription initiation factor BRF2 [Source:RefSeq_peptide;Acc:NP_060780]
16.6303 -15.02 0.000164769 262 6 1 6 [+] picture button
SH2D1A ENSGACT00000024555 SH2 domain-containing protein 1A (Signaling lymphocyte activation molecule-associated protein) (SLAM-associated protein) (T cell signal transduction molecule SAP) (Duncan disease SH2-protein). [Source:Uniprot/SWISSPROT;Acc:O60880]
16.4041 -13.85 0.00016898 301 4 2 6 [+] picture button
VPS72 ENSGACT00000005149 Vacuolar protein sorting-associated protein 72 homolog (Transcription factor-like 1) (Protein YL-1). [Source:Uniprot/SWISSPROT;Acc:Q15906]
15.6121 -16.93 0.00016921 238 4 2 8 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.9914 -13.74 0.000173586 500 8 2 9 [+] picture button
TMEM132C ENSGACT00000018138 Transmembrane protein 132C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8N3T6]
15.5211 -19.22 0.000173647 500 10 2 12 [+] picture button
BRMS1L (2 of 2) ENSGACT00000016526 breast cancer metastasis-suppressor 1-like [Source:RefSeq_peptide;Acc:NP_115728]
16.5774 -22.92 0.000175775 500 3 1 4 [+] picture button
SLC25A39 ENSGACT00000019321 Solute carrier family 25 member 39. [Source:Uniprot/SWISSPROT;Acc:Q9BZJ4]
17.5399 -26.28 0.00018471 500 4 1 4 [+] picture button
SLC13A2 (2 of 2) ENSGACT00000027127 Solute carrier family 13 member 2 (Renal sodium/dicarboxylate cotransporter) (Na(+)/dicarboxylate cotransporter 1) (NaDC-1). [Source:Uniprot/SWISSPROT;Acc:Q13183]
16.7131 -10.8 0.000191372 500 6 1 6 [+] picture button
FAM54B ENSGACT00000012224 family with sequence similarity 54, member B (FAM54B), mRNA [Source:RefSeq_dna;Acc:NM_019557]
16.2565 -13.79 0.000204948 500 6 3 8 [+] picture button
SETD6 ENSGACT00000003421 SET domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q8TBK2]
15.7489 -18.77 0.000212392 500 9 1 11 [+] picture button
PPP1R8 ENSGACT00000018452 Nuclear inhibitor of protein phosphatase 1 (NIPP-1) (Protein phosphatase 1 regulatory inhibitor subunit 8) [Includes: Activator of RNA decay (EC 3.1.4.-) (ARD-1)]. [Source:Uniprot/SWISSPROT;Acc:Q12972]
17.4517 -22.89 0.000218329 406 8 2 12 [+] picture button
MBNL3 ENSGACT00000022511 Muscleblind-like protein 3 (Muscleblind-like X-linked protein) (Cys3His CCG1-required protein) (Protein HCHCR). [Source:Uniprot/SWISSPROT;Acc:Q9NUK0]
16.4704 -16.28 0.000219812 500 3 1 4 [+] picture button

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Download table: GFF TXT
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