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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-19b

826 hits found.


Page 1 of 17
1 2 3 4 5 6 7 8 9 10 11 .. 17 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LRP2 ENSGACT00000006970 Low-density lipoprotein receptor-related protein 2 precursor (Megalin) (Glycoprotein 330) (gp330). [Source:Uniprot/SWISSPROT;Acc:P98164]
16.606 -11.43 8.2244e-10 500 8 14 13 [+] picture button
BAMBI ENSGACT00000002180 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
16.7866 -10.84 2.3115e-09 500 5 13 13 [+] picture button
PI15 ENSGACT00000003579 protease inhibitor 15 preproprotein [Source:RefSeq_peptide;Acc:NP_056970]
17.2191 -15.53 3.02226e-09 500 4 4 6 [+] picture button
SYBU_HUMAN ENSGACT00000006991 Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein). [Source:Uniprot/SWISSPROT;Acc:Q9NX95]
16.9908 -10.46 4.68059e-09 500 9 4 22 [+] picture button
PHF12 ENSGACT00000018142 PHD finger protein 12 (PHD factor 1) (Pf1). [Source:Uniprot/SWISSPROT;Acc:Q96QT6]
17.5816 -14.56 5.43367e-09 500 9 6 12 [+] picture button
RNF111 ENSGACT00000020902 E3 ubiquitin-protein ligase Arkadia (EC 6.3.2.-) (RING finger protein 111). [Source:Uniprot/SWISSPROT;Acc:Q6ZNA4]
17.283 -15.4 5.35359e-08 500 8 13 14 [+] picture button
PTPRG (1 of 2) ENSGACT00000001788 Receptor-type tyrosine-protein phosphatase gamma precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma). [Source:Uniprot/SWISSPROT;Acc:P23470]
16.095 -12.91 5.52417e-08 500 5 12 10 [+] picture button
ATP10A ENSGACT00000018200 Probable phospholipid-transporting ATPase VA (EC 3.6.3.1) (ATPVA) (Aminophospholipid translocase VA). [Source:Uniprot/SWISSPROT;Acc:O60312]
16.0426 -12.37 6.14051e-08 500 2 2 3 [+] picture button
CHST1 ENSGACT00000022649 Carbohydrate sulfotransferase 1 (EC 2.8.2.21) (Keratan sulfate Gal-6 sulfotransferase) (KSST) (KSGal6ST) (KS6ST) (Galactose/N- acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 1) (GST-1). [Source:Uniprot/SWISSPROT;Acc:O43916]
16.1496 -11.87 1.06059e-07 500 4 10 7 [+] picture button
ASXL2 ENSGACT00000015071 additional sex combs like 2 [Source:RefSeq_peptide;Acc:NP_060733]
16.8344 -13.98 1.13309e-07 500 6 5 9 [+] picture button
CHIC1 ENSGACT00000022644 Cysteine-rich hydrophobic domain 1 protein (Brain X-linked protein). [Source:Uniprot/SWISSPROT;Acc:Q5VXU3]
17.4645 -13.99 1.2526e-07 403 8 5 12 [+] picture button
CYP2R1 ENSGACT00000020660 Cytochrome P450 2R1 (EC 1.14.14.-) (Vitamin D 25-hydroxylase). [Source:Uniprot/SWISSPROT;Acc:Q6VVX0]
16.2565 -14.64 1.50889e-07 500 7 3 9 [+] picture button
RGL1 ENSGACT00000016363 Ral guanine nucleotide dissociation stimulator-like 1 (RalGDS-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9NZL6]
16.2277 -16.21 2.15945e-07 500 5 5 6 [+] picture button
ZNF291 ENSGACT00000013943 Zinc finger protein 291. [Source:Uniprot/SWISSPROT;Acc:Q9BY12]
17.3901 -13.75 6.19323e-07 608 4 5 4 [+] picture button
ITGB5 ENSGACT00000011425 Integrin beta-5 precursor. [Source:Uniprot/SWISSPROT;Acc:P18084]
17.1692 -10.95 6.40499e-07 500 6 2 9 [+] picture button
CC2D1A ENSGACT00000025166 Coiled-coil and C2 domain-containing protein 1A (Five repressor element under dual repression-binding protein 1) (FRE under dual repression-binding protein 1) (Freud-1) (Putative NF-kappa-B- activating protein 023N). [Source:Uniprot/SWISSPROT;Acc:Q6P1N0]
17.1662 -13.81 9.18433e-07 500 4 1 4 [+] picture button
SLC17A6 (1 of 2) ENSGACT00000020539 differentiation-associated Na-dependent inorganic phosphate cotr [Source:RefSeq_peptide;Acc:NP_065079]
18.3955 -16.82 1.07714e-06 500 4 5 7 [+] picture button
GULP1 ENSGACT00000003151 GULP, engulfment adaptor PTB domain containing 1 [Source:RefSeq_peptide;Acc:NP_057399]
17.5489 -14.46 1.18692e-06 669 6 7 7 [+] picture button
FAM76B ENSGACT00000026986 Protein FAM76B. [Source:Uniprot/SWISSPROT;Acc:Q5HYJ3]
16.1496 -19.94 1.30822e-06 500 6 3 5 [+] picture button
DNAJC1 ENSGACT00000003338 DnaJ homolog subfamily C member 1 (DnaJ protein homolog MTJ1). [Source:Uniprot/SWISSPROT;Acc:Q96KC8]
16.8887 -8.93 1.74659e-06 313 6 6 8 [+] picture button
TBK1 ENSGACT00000000783 Serine/threonine-protein kinase TBK1 (EC 2.7.11.1) (TANK-binding kinase 1) (T2K) (NF-kappa-B-activating kinase). [Source:Uniprot/SWISSPROT;Acc:Q9UHD2]
16.3635 -12.68 4.27614e-06 500 4 1 4 [+] picture button
CCPG1 ENSGACT00000020961 Dyslexia susceptibility 1 candidate gene 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q8WXU2]
17.5702 -17.82 5.66948e-06 500 7 3 9 [+] picture button
KIAA1841 ENSGACT00000003600 KIAA1841 (KIAA1841), mRNA [Source:RefSeq_dna;Acc:NM_032506]
17.326 -18.45 8.72853e-06 500 6 3 5 [+] picture button
DBX1 (1 of 2) ENSGACT00000000284 developing brain homeobox 1 [Source:RefSeq_peptide;Acc:NP_001025036]
16.3917 -16.88 9.18646e-06 500 5 6 8 [+] picture button
ENSGACT00000024583 Histone H3-like centromeric protein A (Centromere protein A) (CENP-A). [Source:Uniprot/SWISSPROT;Acc:Q803H4]Histone H3-like centromeric protein A (Centromere protein A) (CENP-A). [Source:Uniprot/SWISSPROT;Acc:Q803H4] BY ORTHOLOGY TO:ENSDART00000082147
16.0426 -12.46 9.53082e-06 500 5 2 6 [+] picture button
PIK3R3 (1 of 2) ENSGACT00000006881 Phosphatidylinositol 3-kinase regulatory subunit gamma (PI3-kinase p85-subunit gamma) (PtdIns-3-kinase p85-gamma) (p55PIK). [Source:Uniprot/SWISSPROT;Acc:Q92569]
17.1987 -17.26 1.2491e-05 500 6 5 5 [+] picture button
GPR137B (1 of 3) ENSGACT00000005541 Integral membrane protein GPR137B (Transmembrane 7 superfamily member 1). [Source:Uniprot/SWISSPROT;Acc:O60478]
16.1849 -8.13 1.51789e-05 407 5 2 10 [+] picture button
CLDN15 (1 of 2) ENSGACT00000025514 Mitochondrial fission 1 protein (Fis1 homolog) (hFis1) (Tetratricopeptide repeat protein 11) (TPR repeat protein 11). [Source:Uniprot/SWISSPROT;Acc:Q9Y3D6]
17.0532 -13.68 1.67476e-05 500 7 3 14 [+] picture button
ABCG2 (1 of 2) ENSGACT00000024623 ATP-binding cassette sub-family G member 2 (Placenta-specific ATP- binding cassette transporter) (Breast cancer resistance protein) (Mitoxantrone resistance-associated protein) (CD338 antigen) (CDw338). [Source:Uniprot/SWISSPROT;Acc:Q9UNQ0]
17.0713 -14.73 1.8851e-05 320 7 2 10 [+] picture button
CPEB3 ENSGACT00000003864 Cytoplasmic polyadenylation element-binding protein 3 (CPE-binding protein 3) (CPE-BP3) (hCPEB-3). [Source:Uniprot/SWISSPROT;Acc:Q8NE35]
16.6987 -11.9 1.92738e-05 500 4 1 11 [+] picture button
NTN1 (2 of 2) ENSGACT00000009130 Netrin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:O95631]
16.8424 -14.5 2.35522e-05 500 7 3 9 [+] picture button
PCTK3 ENSGACT00000014520 Serine/threonine-protein kinase PCTAIRE-3 (EC 2.7.11.22) (PCTAIRE- motif protein kinase 3). [Source:Uniprot/SWISSPROT;Acc:Q07002]
17.1121 -16.11 2.54016e-05 500 5 3 5 [+] picture button
JAZF1 (1 of 2) ENSGACT00000010890 Juxtaposed with another zinc finger protein 1 (TAK1-interacting protein 27) (Zinc finger protein 802). [Source:Uniprot/SWISSPROT;Acc:Q86VZ6]
18.1098 -18.52 2.73819e-05 500 2 4 2 [+] picture button
PLK4 ENSGACT00000010877 Serine/threonine-protein kinase PLK4 (EC 2.7.11.21) (Polo-like kinase 4) (PLK-4) (Serine/threonine-protein kinase Sak) (Serine/threonine- protein kinase 18). [Source:Uniprot/SWISSPROT;Acc:O00444]
17.314 -17.96 3.38115e-05 500 5 1 7 [+] picture button
GPR98 ENSGACT00000013954 G-protein coupled receptor 98 precursor (Monogenic audiogenic seizure susceptibility protein 1 homolog) (Very large G-protein coupled receptor 1) (Usher syndrome type-2C protein). [Source:Uniprot/SWISSPROT;Acc:Q8WXG9]
17.5245 -14.22 3.4246e-05 389 7 8 12 [+] picture button
SRRM1 ENSGACT00000009651 Serine/arginine repetitive matrix protein 1 (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160). [Source:Uniprot/SWISSPROT;Acc:Q8IYB3]
16.1421 -12.47 3.73675e-05 500 4 1 4 [+] picture button
C1GALT1C1 ENSGACT00000023047 C1GALT1-specific chaperone 1 [Source:RefSeq_peptide;Acc:NP_689905]
17.2191 -13.34 4.31228e-05 500 7 1 13 [+] picture button
BOK (1 of 2) ENSGACT00000006101 Bcl-2-related ovarian killer protein (Hbok). [Source:Uniprot/SWISSPROT;Acc:Q9UMX3]
16.4635 -10.17 4.41196e-05 640 3 5 5 [+] picture button
HES2 ENSGACT00000008573 Transcription factor HES-2 (Hairy and enhancer of split 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y543]
17.7538 -18.72 5.03377e-05 500 5 3 9 [+] picture button
ENSGACT00000015605 hypothetical protein LOC561961 [Source:RefSeq_peptide;Acc:NP_001038435]hypothetical protein LOC561961 [Source:RefSeq_peptide;Acc:NP_001038435] BY ORTHOLOGY TO:ENSDART00000099823
17.7781 -15.3 6.49012e-05 680 2 2 2 [+] picture button
FOXM1 ENSGACT00000026382 Forkhead box protein M1 (Forkhead-related protein FKHL16) (Hepatocyte nuclear factor 3 forkhead homolog 11) (HNF-3/fork-head homolog 11) (HFH-11) (Winged-helix factor from INS-1 cells) (M-phase phosphoprotein 2) (MPM-2 reactive phosphoprotein 2) (Transcri [Source:Uniprot/SWISSPROT;Acc:Q08050]
17.7442 -15.52 6.67991e-05 500 3 2 5 [+] picture button
SOD2 ENSGACT00000011956 Superoxide dismutase [Mn], mitochondrial precursor (EC 1.15.1.1). [Source:Uniprot/SWISSPROT;Acc:P04179]
17.3418 -19.12 6.73014e-05 417 8 4 14 [+] picture button
GLB1 ENSGACT00000023345 Beta-galactosidase-related protein precursor (Beta-galactosidase-like protein) (S-Gal) (Elastin-binding protein) (EBP). [Source:Uniprot/SWISSPROT;Acc:P16279]
16.6578 -8.86 7.04069e-05 364 10 1 17 [+] picture button
ENSGACT00000015476 NOT ANNOTATED
16.7913 -10.99 7.04208e-05 500 4 1 3 [+] picture button
RBM28 ENSGACT00000016724 RNA-binding protein 28 (RNA-binding motif protein 28). [Source:Uniprot/SWISSPROT;Acc:Q9NW13]
16.2909 -9.66 7.31046e-05 218 7 2 12 [+] picture button
JAZF1 (2 of 2) ENSGACT00000009539 Juxtaposed with another zinc finger protein 1 (TAK1-interacting protein 27) (Zinc finger protein 802). [Source:Uniprot/SWISSPROT;Acc:Q86VZ6]
17.8686 -14.73 7.45296e-05 500 5 4 5 [+] picture button
C14orf106 ENSGACT00000011305 Uncharacterized potential DNA-binding protein C14orf106 (P243). [Source:Uniprot/SWISSPROT;Acc:Q6P0N0]
16.4041 -11.72 7.51647e-05 132 3 2 3 [+] picture button
OAZ1 ENSGACT00000016744 Ornithine decarboxylase antizyme (ODC-Az). [Source:Uniprot/SWISSPROT;Acc:P54368]
16.9248 -12.18 7.73941e-05 444 6 4 10 [+] picture button
ACTL6A ENSGACT00000013215 Actin-like protein 6A (53 kDa BRG1-associated factor A) (Actin-related protein Baf53a) (ArpNbeta). [Source:Uniprot/SWISSPROT;Acc:O96019]
16.6462 -10.83 7.80426e-05 471 3 1 4 [+] picture button
TMEM126B ENSGACT00000023941 Transmembrane protein 126B. [Source:Uniprot/SWISSPROT;Acc:Q8IUX1]
17.0383 -18.48 7.88389e-05 500 6 2 7 [+] picture button

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Download table: GFF TXT
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