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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-199

828 hits found.


Page 1 of 17
1 2 3 4 5 6 7 8 9 10 11 .. 17 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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FZD4 ENSGACT00000010688 Frizzled-4 precursor (Fz-4) (hFz4) (FzE4) (CD344 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9ULV1]
15.9488 -14.64 9.29331e-08 500 4 2 7 [+] picture button
MGAT4B ENSGACT00000022352 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme B isoform 1 [Source:RefSeq_peptide;Acc:NP_055090]
17.5133 -22.05 2.05546e-07 500 4 2 5 [+] picture button
NFE2L3 ENSGACT00000009375 Nuclear factor erythroid 2-related factor 3 (NF-E2-related factor 3) (NFE2-related factor 3) (Nuclear factor, erythroid derived 2, like 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y4A8]
18.3955 -17.09 2.67237e-07 500 7 3 14 [+] picture button
TARS ENSGACT00000006639 Threonyl-tRNA synthetase, cytoplasmic (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS). [Source:Uniprot/SWISSPROT;Acc:P26639]
16.2187 -19.42 4.1438e-07 353 6 3 8 [+] picture button
JAG1 (1 of 2) ENSGACT00000005948 Jagged-1 precursor (Jagged1) (hJ1) (CD339 antigen). [Source:Uniprot/SWISSPROT;Acc:P78504]
16.1984 -16.28 1.42932e-06 500 9 9 14 [+] picture button
MET ENSGACT00000012160 Hepatocyte growth factor receptor precursor (EC 2.7.10.1) (HGF receptor) (Scatter factor receptor) (SF receptor) (HGF/SF receptor) (Met proto-oncogene tyrosine kinase) (c-Met). [Source:Uniprot/SWISSPROT;Acc:P08581]
15.7218 -15.26 4.14791e-06 500 6 2 6 [+] picture button
PIGS ENSGACT00000027326 GPI transamidase component PIG-S (Phosphatidylinositol-glycan biosynthesis class S protein). [Source:Uniprot/SWISSPROT;Acc:Q96S52]
15.9913 -15.15 4.31315e-06 500 2 2 3 [+] picture button
DMAP1 ENSGACT00000013577 DNA methyltransferase 1-associated protein 1 (DNMT1-associated protein 1) (DNMAP1). [Source:Uniprot/SWISSPROT;Acc:Q9NPF5]
15.8301 -27.06 4.78348e-06 500 7 1 10 [+] picture button
PTCD3 ENSGACT00000024898 Pentatricopeptide repeat domain 3 [Source:RefSeq_peptide;Acc:NP_060422]
15.5346 -13.1 5.65367e-06 500 6 1 7 [+] picture button
ATPBD1C ENSGACT00000023332 ATP binding domain 1 family, member C [Source:RefSeq_peptide;Acc:NP_057385]
16.2909 -18.73 7.00165e-06 207 3 1 4 [+] picture button
DPP10 (2 of 2) ENSGACT00000002085 Inactive dipeptidyl peptidase 10 (Dipeptidyl peptidase X) (Dipeptidyl peptidase-like protein 2) (DPL2) (Dipeptidyl peptidase IV-related protein 3) (DPRP-3). [Source:Uniprot/SWISSPROT;Acc:Q8N608]
18.2034 -25.39 8.02262e-06 500 3 5 3 [+] picture button
CLPTM1L (1 of 2) ENSGACT00000005249 cisplatin resistance related protein CRR9p [Source:RefSeq_peptide;Acc:NP_110409]
16.6225 -21.69 8.7804e-06 500 8 3 13 [+] picture button
PHF13 ENSGACT00000010542 PHD finger protein 13. [Source:Uniprot/SWISSPROT;Acc:Q86YI8]
17.5702 -23.18 8.89595e-06 500 6 4 7 [+] picture button
AOC2 ENSGACT00000007673 Retina-specific copper amine oxidase precursor (EC 1.4.3.6) (RAO) (Amine oxidase [copper-containing]). [Source:Uniprot/SWISSPROT;Acc:O75106]
15.7218 -14.56 9.18328e-06 500 5 2 7 [+] picture button
JUNB (2 of 2) ENSGACT00000025299 Transcription factor jun-B. [Source:Uniprot/SWISSPROT;Acc:P17275]
16.6315 -14.9 1.00968e-05 500 5 4 6 [+] picture button
TGFB2 ENSGACT00000018621 Transforming growth factor beta-2 precursor (TGF-beta-2) (Glioblastoma-derived T-cell suppressor factor) (G-TSF) (BSC-1 cell growth inhibitor) (Polyergin) (Cetermin). [Source:Uniprot/SWISSPROT;Acc:P61812]
15.6148 -17.8 1.12773e-05 500 13 1 19 [+] picture button
C8orf33 ENSGACT00000011891 Uncharacterized protein C8orf33. [Source:Uniprot/SPTREMBL;Acc:Q9H7E9]
15.5721 -20.15 1.16646e-05 555 4 1 6 [+] picture button
NME3 ENSGACT00000017275 Nucleoside diphosphate kinase 3 (EC 2.7.4.6) (NDK 3) (NDP kinase 3) (Nucleoside diphosphate kinase C) (NDPKC) (nm23-H3) (DR-nm23). [Source:Uniprot/SWISSPROT;Acc:Q13232]
17.4631 -23.16 1.52328e-05 500 5 3 7 [+] picture button
NCSTN ENSGACT00000023496 Nicastrin precursor. [Source:Uniprot/SWISSPROT;Acc:Q92542]
16.5316 -17.48 1.58353e-05 500 8 2 8 [+] picture button
MAP3K11 ENSGACT00000026516 Mitogen-activated protein kinase kinase kinase 11 (EC 2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3 domain-containing proline- rich kinase). [Source:Uniprot/SWISSPROT;Acc:Q16584]
15.7218 -18.18 1.65442e-05 500 3 1 3 [+] picture button
GPR89B ENSGACT00000004749 Protein GPR89A (Putative MAPK-activating protein PM01) (Putative NF- kappa-B-activating protein 90). [Source:Uniprot/SWISSPROT;Acc:Q9Y302]
16.2392 -12.32 1.894e-05 357 8 2 7 [+] picture button
CXXC5 ENSGACT00000027372 CXXC finger 5 [Source:RefSeq_peptide;Acc:NP_057547]
16.0647 -16.8 2.00529e-05 81 2 11 5 [+] picture button
SLC39A12 ENSGACT00000005364 solute carrier family 39 (zinc transporter), member 12 [Source:RefSeq_peptide;Acc:NP_689938]
18.6667 -23.67 2.20226e-05 233 5 2 6 [+] picture button
YWHAG (2 of 2) ENSGACT00000014905 14-3-3 protein gamma (Protein kinase C inhibitor protein 1) (KCIP-1). [Source:Uniprot/SWISSPROT;Acc:P61981]
17.0186 -15.7 2.52756e-05 500 5 8 5 [+] picture button
LRRC1 ENSGACT00000008417 Leucine-rich repeat-containing protein 1 (LAP and no PDZ protein) (LANO adapter protein). [Source:Uniprot/SWISSPROT;Acc:Q9BTT6]
15.7036 -12.55 2.81583e-05 500 5 1 6 [+] picture button
LARGE ENSGACT00000025458 Glycosyltransferase-like protein LARGE1 (EC 2.4.-.-) (Acetylglucosaminyltransferase-like 1A). [Source:Uniprot/SWISSPROT;Acc:O95461]
16.5774 -20.59 2.85993e-05 500 7 3 10 [+] picture button
ASPHD1 ENSGACT00000016975 Aspartate beta-hydroxylase domain-containing protein 1 (EC 1.14.11.-). [Source:Uniprot/SWISSPROT;Acc:Q5U4P2]
15.8287 -19.14 2.96648e-05 500 6 1 8 [+] picture button
TRIOBP (1 of 2) ENSGACT00000009610 TRIO and F-actin-binding protein (Protein Tara) (Trio-associated repeat on actin). [Source:Uniprot/SWISSPROT;Acc:Q9H2D6]
17.6851 -22.18 3.31014e-05 500 5 2 6 [+] picture button
PACSIN2 ENSGACT00000026287 Protein kinase C and casein kinase substrate in neurons protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9UNF0]
17.2191 -18.37 3.41723e-05 500 5 2 5 [+] picture button
TNFAIP8L2 ENSGACT00000017961 tumor necrosis factor, alpha-induced protein 8-like 2 [Source:RefSeq_peptide;Acc:NP_078851]
15.7253 -22.21 3.64677e-05 260 3 1 9 [+] picture button
FSD1 ENSGACT00000019027 fibronectin type III and SPRY domain containing 1 [Source:RefSeq_peptide;Acc:NP_077309]
16.3874 -23.97 4.17784e-05 500 6 2 7 [+] picture button
TRIM37 ENSGACT00000027643 Tripartite motif-containing protein 37 (Mulibrey nanism protein). [Source:Uniprot/SWISSPROT;Acc:O94972]
17.191 -25.58 4.29962e-05 500 6 2 12 [+] picture button
STX4 ENSGACT00000005367 Syntaxin-4 (Renal carcinoma antigen NY-REN-31). [Source:Uniprot/SWISSPROT;Acc:Q12846]
16.7913 -20.23 4.3427e-05 500 6 5 10 [+] picture button
ICA1L ENSGACT00000018272 Islet cell autoantigen 1-like protein (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 15 protein). [Source:Uniprot/SWISSPROT;Acc:Q8NDH6]
17.6368 -18.47 4.48964e-05 500 5 3 9 [+] picture button
RCSD1 ENSGACT00000015871 protein kinase substrate MK2S4 [Source:RefSeq_peptide;Acc:NP_443094]
17.5277 -23.35 4.78295e-05 491 6 2 8 [+] picture button
TELO2 ENSGACT00000011202 TEL2, telomere maintenance 2, homolog [Source:RefSeq_peptide;Acc:NP_057195]
16.0402 -17.64 4.89668e-05 442 9 2 9 [+] picture button
ENSGACT00000012651 hypothetical protein LOC393439 [Source:RefSeq_peptide;Acc:NP_956761]hypothetical protein LOC393439 [Source:RefSeq_peptide;Acc:NP_956761] BY ORTHOLOGY TO:ENSDART00000019248
17.0912 -23.84 5.06361e-05 500 4 1 5 [+] picture button
HPSE ENSGACT00000001536 Heparanase precursor (EC 3.2.-.-) (Heparanase-1) (Hpa1) (Endo- glucoronidase) [Contains: Heparanase 8 kDa subunit; Heparanase 50 kDa subunit]. [Source:Uniprot/SWISSPROT;Acc:Q9Y251]
17.6485 -17.99 5.27489e-05 104 1 1 3 [+] picture button
HIPK2 ENSGACT00000017929 Homeodomain-interacting protein kinase 2 (EC 2.7.11.1) (hHIPk2). [Source:Uniprot/SWISSPROT;Acc:Q9H2X6]
16.684 -19.4 5.33466e-05 500 6 2 10 [+] picture button
PPP1R3E ENSGACT00000018765 Homeobox and leucine zipper protein Homez (Homeodomain leucine zipper- containing factor). [Source:Uniprot/SWISSPROT;Acc:Q8IX15]
18.0066 -21.53 5.96818e-05 500 4 4 6 [+] picture button
ATXN3L ENSGACT00000010669 Putative ataxin-3-like protein (EC 3.4.22.-) (Machado-Joseph disease protein 1-like). [Source:Uniprot/SWISSPROT;Acc:Q9H3M9]
16.2208 -17.18 6.05243e-05 500 5 1 5 [+] picture button
NEO1 ENSGACT00000022536 Neogenin precursor. [Source:Uniprot/SWISSPROT;Acc:Q92859]
15.7224 -19.79 6.29299e-05 500 4 1 8 [+] picture button
AHCTF1P ENSGACT00000021471 CDNA FLJ32832 fis, clone TESTI2003196. (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q96M44]
16.6843 -17.21 6.58211e-05 500 4 2 4 [+] picture button
GAN ENSGACT00000003329 Gigaxonin (Kelch-like protein 16). [Source:Uniprot/SWISSPROT;Acc:Q9H2C0]
15.9198 -17.67 6.73625e-05 500 6 1 7 [+] picture button
GALNTL4 (1 of 2) ENSGACT00000020763 Putative polypeptide N-acetylgalactosaminyltransferase-like protein 4 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 4) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase- like protein 4) (Polypeptide GalNAc transferase-lik [Source:Uniprot/SWISSPROT;Acc:Q6P9A2]
16.0318 -17.72 7.166e-05 570 10 5 9 [+] picture button
FLRT3 ENSGACT00000006049 Leucine-rich repeat transmembrane protein FLRT3 precursor (Fibronectin-like domain-containing leucine-rich transmembrane protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9NZU0]
16.5877 -12.71 7.19931e-05 500 8 10 12 [+] picture button
CYB5R3 ENSGACT00000026503 NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R) (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form]. [Source:Uniprot/SWISSPROT;Acc:P00387]
17.0828 -14.15 7.60414e-05 181 3 4 13 [+] picture button
SOD1 ENSGACT00000027267 Superoxide dismutase [Cu-Zn] (EC 1.15.1.1). [Source:Uniprot/SWISSPROT;Acc:P00441]
16.3241 -20.1 7.76103e-05 500 4 1 7 [+] picture button
ENSGACT00000024003 Homolog of Brachydanio rerio "MINDIN1. [Source:Uniprot/SPTREMBL;Acc:O42111]"Homolog of Brachydanio rerio "MINDIN1. [Source:Uniprot/SPTREMBL;Acc:O42111]" BY ORTHOLOGY TO:SINFRUT00000164665
16.8982 -20.95 8.46132e-05 500 3 3 3 [+] picture button
SLC2A10 ENSGACT00000015115 Solute carrier family 2, facilitated glucose transporter member 10 (Glucose transporter type 10). [Source:Uniprot/SWISSPROT;Acc:O95528]
15.6555 -19.48 8.78758e-05 500 6 2 6 [+] picture button

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Download table: GFF TXT
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